Showing: duplicatesreset
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picard tools HsMetrics not using duplicate reads to calculate coverage
duplicates picard hsmetrics written 24 months ago by nbhardwaj80 • updated 8 days ago by Biostar ♦♦ 20
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Gatk Pipeline: Markduplicates At The End ?
workflow next-gen pipeline gatk markduplicates duplicates bam written 5.4 years ago by Pierre Lindenbaum106k • updated 6 months ago by Biostar ♦♦ 20
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Removal of PCR dupliactes from trimmed reads
duplicates samtools rmdup pre-processed reads written 8 months ago by deepti1rao0 • updated 8 months ago by genomax46k
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Removing PCR duplicates - fastq or BAM?
duplicates fastq alignment bam written 9 months ago by rbronste160 • updated 9 months ago by Istvan Albert ♦♦ 76k
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Duplicates in ATAC-seq data
duplicates picard atac-seq samtools rmdup written 9 months ago by rbronste160 • updated 9 months ago by James Ashmore2.3k
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Does Markduplicates Work If Mate Pair Information Is Not 'Fixed'?
duplicates picard markduplicates bam written 5.6 years ago by ian.streeter10 • updated 10 months ago by Biostar ♦♦ 20
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Picard Markduplicates Problem
duplicates picard written 12 months ago by xd_d70 • updated 12 months ago by genomax46k
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dedupe from BBMAP suite woes with memory and stdout
duplicates fastq bbmap dedupe linux written 14 months ago by ALchEmiXt1.9k • updated 14 months ago by Brian Bushnell15k
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proximal duplicate parameters - HiSeq X
duplicates proximal written 14 months ago by Richard520 • updated 14 months ago by genomax46k
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How To Remove The Same Sequences In The Fasta Files?
fasta duplicates sequence written 7.5 years ago by Zhangleisdau270 • updated 14 months ago by Eslam Samir90
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Change signification in bam for duplicates
duplicates bam sam written 15 months ago by Korsocius80 • updated 15 months ago by Devon Ryan78k
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Duplicates on Illumina
duplicates illumina written 15 months ago by predeus480 • updated 15 months ago by Brian Bushnell15k
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Creating fastq files without duplicata from .bam file
duplicates fastq picard bam written 17 months ago by Picasa340 • updated 17 months ago by Medhat7.5k
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Picard MarkDuplicates.jar error
duplicates picard error written 17 months ago by mark.rose10 • updated 17 months ago by Dan D6.4k
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PCR duplicata and de novo assembly ??
duplicates preqc pcr written 18 months ago by Picasa340 • updated 18 months ago by Medhat7.5k
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Removing duplicates in high coverage ancient DNA mitochondrial data
adna picard duplicates written 19 months ago by stolarek.ir550 • updated 19 months ago by Brice Sarver2.4k
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Can You Make A Bam File Picard Compatible? I Forgot -M With Bwa Mem
duplicates picard bwa written 4.8 years ago by ajc8120 • updated 2.1 years ago by Matt Shirley8.3k
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Remove rows based on duplicates in one column
duplicates rna-seq written 2.2 years ago by thomasterTW20 • updated 2.2 years ago by Veera 70
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Regarding PCR duplicates vs duplicate entries in a bedfile
bedfile duplicates pcr written 2.4 years ago by eudoraleer10 • updated 2.4 years ago by Antonio R. Franco3.6k
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