Showing: edgerreset
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DE analysis with edgeR and possibly batch effect
de analysis edger batch effect written 3 days ago by seta1.1k • updated 3 days ago by Devon Ryan88k
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Using featureCounts Output for DE analysis in edgeR
featurecounts rna-seq edger written 20 days ago by markm0140 • updated 20 days ago by Friederike3.2k
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7 follow
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edgeR make contrast
contrasts rna-seq edger written 5 weeks ago by Bnf83130 • updated 4 weeks ago by i.sudbery4.0k
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6 follow
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error while using edgeR( Negative counts not allowed)
R rna-seq edger written 5 weeks ago by deeksha369610 • updated 5 weeks ago by zx87546.7k
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error while making a DEGList object on R using edgeR package
rna-seq edger written 5 weeks ago by saumya.sharma15090 • updated 5 weeks ago by WouterDeCoster37k
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RNA-Seq: X samples and X batches
batch effects deseq2 rna-seq edger written 5 weeks ago by Behram Radmanesh10 • updated 5 weeks ago by WouterDeCoster37k
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7
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edgeR batch effect
bactch effect R design rna-seq edger written 9 weeks ago by NielQC10 • updated 8 weeks ago by Charles Warden6.4k
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11 follow
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4
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293
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RNAseq analysis: what comes first, filtering or normalization
R edger rna-seq written 11 weeks ago by Herbert0 • updated 11 weeks ago by h.mon24k
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Differential analysis with replicates using edgeR
differential analysis design matrix rna-seq edger written 3 months ago by Vasu320 • updated 12 weeks ago by Biostar ♦♦ 20
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EdgeR with Paired Sample Replicates
R edger rna-seq written 3 months ago by kmyers220 • updated 3 months ago by b.nota6.2k
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Normalization for small non-coding RNA (piRNAs)
normalization deseq2 limma edger written 3 months ago by Konstantinos Yeles40 • updated 3 months ago by A. Domingues1.8k
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Making a table of RNA seq results
R rna-seq edger written 4 months ago by tw61720 • updated 4 months ago by zx87546.7k
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How to make a gene expression correlation graph?
R rna-seq edger written 4 months ago by unawaz40 • updated 4 months ago by h.mon24k
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No replicates in 1 group, which idea is the best to apply?
no replicates deseq2 rna-seq edger written 4 months ago by Batu110 • updated 4 months ago by EagleEye6.2k
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Should I remove samples after normalization of miRNA seq read counts ?
rna-seq edger mirnas written 13 months ago by Bj√∂rn40 • updated 5 months ago by Biostar ♦♦ 20
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How to make cluster from gene read count?
R deseq2 rna-seq clustering edger written 5 months ago by ahmad mousavi410 • updated 5 months ago by Chirag Parsania1.4k
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