Showing: edgerreset
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How to define a non differentially expressed gene?
deseq2 edger deg non-deg rna-seq written 21 days ago by xieshaojun062160 • updated 20 days ago by unksci90
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What does benchmark method exactly mean?
benchmark methods edger deg rna-seq written 21 days ago by natalia.fghf190 • updated 21 days ago by Macspider580
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TMM normalisation on a subtset of the data
normlization edger tmm written 14 months ago by tomasscheitel10 • updated 21 days ago by Biostar ♦♦ 10
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edgeR estimateDisp provide error
R edger written 26 days ago by raveenpoudel0 • updated 26 days ago by genomax224k
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Chipseq Background Subtraction For Count-Based Differential Binding Methods?
chip-seq edger written 4.6 years ago by Ryan Thompson3.2k • updated 5 weeks ago by Biostar ♦♦ 10
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How should I construct this contrast?
rna-seq edger written 10 weeks ago by carl.h10 • updated 10 weeks ago by mforde84450
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DE analysis of low-expression transcripts
sleuth expression deseq2 rna-seq edger written 11 weeks ago by elsoja0 • updated 11 weeks ago by Devon Ryan63k
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replicates in edgeR and DESeq2
deseq2 rna-seq edger cancer cell line encyclopedia written 11 weeks ago by hibari.kyouya10 • updated 11 weeks ago by mforde84450
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Identifying DEG from time course data without condition
deseq edger rna-seq written 3 months ago by ChIP450 • updated 3 months ago by b.nota2.6k
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RNA-Seq, why estimate the distribution of your data?
deseq2 rna-seq edger written 3 months ago by timmse0 • updated 3 months ago by Devon Ryan63k
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edgeR RNA-seq analysis (glm, plots, and heatmaps)
heatmap rna-seq edger mds-plot written 4 months ago by emblake30 • updated 4 months ago by Devon Ryan63k
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Getting FPKM value from edgeR software
edger error fpkm value written 5 months ago by seta830 • updated 5 months ago by EagleEye3.4k
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What's next differential expression?
de differential expression edger rna-seq written 6 months ago by germelcar10 • updated 6 months ago by Farbod2.9k
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number of grouping affect log2 fold change in DESeq2 analysis?
R deseq2 log2fc edger written 6 months ago by star40 • updated 6 months ago by Devon Ryan63k
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Using offsets in edgeR to correct GC content
R gc linear models edger written 10 months ago by Dawe220 • updated 6 months ago by javiergutierreza0
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