Showing: edgerreset
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How to normalized TPM with TMM method?
tpm rna-seq edger tmm written 6 weeks ago by xiaoguang10 • updated 3 days ago by Gordon Smyth950
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DEG tool for just 2 pair end data
deseq2 limma rna-seq edger written 20 days ago by sabaghianamir700 • updated 20 days ago by RamRS23k
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6 follow
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edgeR DGElist Error: Negative counts not allowed.
edger written 27 days ago by ma2320 • updated 24 days ago by Gordon Smyth950
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Why DESeq2 filter and remove genes with high count?
gene R deseq2 edger written 2.9 years ago by star190 • updated 24 days ago by Biostar ♦♦ 20
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Is calcuNormFactors necessary in the calculation of RPKM?
rpkm rna-seq edger written 6 weeks ago by wangdp123160 • updated 6 weeks ago by ATpoint21k
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Filtering proteomics matrix before diff. exp.
deseq2 limma edger written 8 weeks ago by rpraveenkumarbio10 • updated 8 weeks ago by JC8.2k
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205
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which data is more suitable for Heatmap?
next-gen rna-seq edger heatmap written 9 weeks ago by star190 • updated 9 weeks ago by ATpoint21k
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5 follow
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edgeR and design matrix with triplicates
R edger rna-seq written 9 weeks ago by elb160 • updated 9 weeks ago by ATpoint21k
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167
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edgeR FDR always 1
fdr differentialexpression edger mirna written 9 weeks ago by AngAdd0 • updated 9 weeks ago by swbarnes26.1k
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trouble abundance_estimates_to_matrix.pl (trinity2.4.0)
trinity rna-seq edger written 11 weeks ago by 13532884080 • updated 11 weeks ago by h.mon26k
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filter data by normalization
R tcga rna-seq edger written 4 months ago by leandrogarcia205040 • updated 11 weeks ago by Biostar ♦♦ 20
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Abundance Counting for Non-Model Organism for edgeR
rna-seq abundance edger written 12 weeks ago by sdbaney0 • updated 12 weeks ago by ATpoint21k
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339
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How to do scaling in ComplexHeatmap
R chip-seq edger complexheatmap written 3 months ago by sophialovechan40 • updated 12 weeks ago by zx87547.9k
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edgeR analysis outputs FDR equals 1
fdr rna-seq edger written 3 months ago by silas008100 • updated 3 months ago by swbarnes26.1k
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