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Efetch extracting large fasta data from positon
efetch written 11 weeks ago by bengoaluoni0 • updated 11 weeks ago by Pierre Lindenbaum129k
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6 follow
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Retrieve GFF3 file from ncbi
gff3 ncbi efetch written 2.5 years ago by john70 • updated 3 months ago by rohitsatyam102170
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efetch sra suddenly stopping
ncbi sra fastq esearch efetch written 7 months ago by barry0 • updated 7 months ago by ATpoint36k
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311
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How to extract gene ids from NCBI gene names using either efetch or python ?
ncbi efetch entrez written 15 months ago by lakhujanivijay5.1k • updated 15 months ago by genomax87k
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efetch error LWP::Protocol::https not installed
efetch written 2.8 years ago by traviata10 • updated 17 months ago by indexofire30
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web efetch Json out put which is not a real json
python efetch json biopython pubmed written 2.9 years ago by Lilizine0 • updated 18 months ago by MatthewP680
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609
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Different output fields from efetch
python efetch sequence written 20 months ago by Medhat8.7k • updated 20 months ago by Pierre Lindenbaum129k
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Which tool to use to get all citations of a pmid paper?
entrez eutils efetch written 22 months ago by Saad Khan400 • updated 22 months ago by h.mon30k
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572
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Strand not working in biopython efetch
efetch biopython strand written 22 months ago by tim.ivanov.9210 • updated 22 months ago by Joe17k
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Cannot get efetch to download genome - what is wrong?
genome fasta efetch entrez written 2.3 years ago by BioBing120 • updated 2.3 years ago by h.mon30k
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To get the name of the strains by searching assembly genome number GCF_
ncbi python efetch written 2.5 years ago by horsedog60 • updated 2.5 years ago by Joseph Hughes2.8k
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NCBI Entrez - efetch from PMC returns only abstract
efetch entrez pmc written 3.0 years ago by chaniart0 • updated 3.0 years ago by Jean-Karim Heriche23k
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Download NCBI genomes using taxonomy id (taxid)
ncbi python efetch biopython written 3.4 years ago by David160 • updated 3.0 years ago by pedrorodrigues10
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URL for NCBI Efetch + XML with full annotation table
ncbi xml efetch eutils annotation written 3.1 years ago by Pierre Lindenbaum129k • updated 3.1 years ago by genomax87k
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956
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Mistakes in a bash script for adding taxid for nt database
taxid efetch nt database shell bash written 3.1 years ago by wyc66121710 • updated 3.1 years ago by Istvan Albert ♦♦ 84k
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Extract Bibliographic Reference from GEO dataset using EFetch?
geo ncbi efetch written 3.2 years ago by Tom30 • updated 3.2 years ago by Santosh Anand5.1k
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