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0
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2
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132
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2
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What is the best way to analyze and enrich a list of DE genes from RNAseq?
R bioinformatics enrichment rna-seq pathways written 6 days ago by miky.zo • 0
0
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0
answers
59
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0
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xCell -Input data format?
enrichment xcell written 10 days ago by chupalav • 0
0
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0
answers
49
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0
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Has someone experience with the KOBAS (v. 3) standalone enrichment software?
standalone enrichment biopython kobas kegg written 12 days ago by t.bergmann • 0
2
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1
answer
85
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1
answer
Statistically overrepresented gene types from Differentially expressed genes.
enrichment next-gen gene-types rna-seq written 23 days ago by EVR • 570 • updated 23 days ago by i.sudbery ♦ 7.3k
0
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1
answer
67
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1
answer
Multiple protein ids issue- which protein IDs should be selected for downstream analysis?
proteomics enrichment persus written 4 weeks ago by harelarik • 50
102
votes
15
answers
55k
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44 follow
15
answers
Tools To Find Gene Ontology Term Enrichment
gene enrichment tool written 10.1 years ago by Biostar User • 1.0k • updated 5 weeks ago by tarashanst • 0
4
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2
answers
124
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2
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Get GC content, Conservation score and repeat fraction from UCSC?
enrichment genomic integration ucsc written 11 weeks ago by star • 230 • updated 11 weeks ago by Luis Nassar • 360
59
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0
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6.1k
views
68 follow
0
answers
Tutorial: Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 21 months ago by egeulgen • 990
0
votes
3
answers
183
views
5 follow
3
answers
functional enichment with custom gene annotation
enrichment written 4 months ago by zhang.jianhai • 0 • updated 3 months ago by padwalmk • 80
0
votes
1
answer
283
views
1
answer
Reactome Pathway Analysis Identifiers not found
pathway gene analysis proteins enrichment written 11 months ago by bachs • 0 • updated 3 months ago by levshagam • 0
0
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0
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89
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0
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Group/Map GO biological processes by macro categories
R enrichment written 3 months ago by lessismore • 770
0
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0
answers
1.4k
views
0
answers
Gene Set Enrichment Analysis using Variant Density instead of Expression levels?
R density gsea enrichment written 3.8 years ago by anp375 • 170 • updated 4 months ago by Biostar ♦♦ 20
1
vote
1
answer
192
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1
answer
Functional annotation of pathways in a genelist
gene annotation pathway analysis gsea enrichment written 4 months ago by tejas_j • 0 • updated 4 months ago by hibernicah • 20
23
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0
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2.6k
views
17 follow
0
answers
Tool: pathfindR - Enrichment Analysis using Active Subnetworks
pathway R active subnetwork tool enrichment written 2.1 years ago by egeulgen • 990
3
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1
answer
112
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1
answer
Enrichment analisys with clusterProfiler in CNVs
enrichment clusterprofiler cnv written 5 months ago by roalva1 • 80 • updated 5 months ago by jared.andrews07 ♦ 5.3k
2
votes
2
answers
682
views
2
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Using clusterprofiler (or else) top look for enrichment of one specific GO term
R bioconductor clusterprofiler enrichment written 12 months ago by hesse.sebastian • 80 • updated 5 months ago by ifanlyn • 0
0
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0
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1.3k
views
0
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visualize enrichment results and compare multiple enrichments
R bioconductor statistic enrichment written 5.6 years ago by dago • 2.6k • updated 5 months ago by Biostar ♦♦ 20
13
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2
answers
438
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12 follow
2
answers
What is the "state of the art" in gene set analysis in 2019?
pathway enrichment go written 6 months ago by Istvan Albert ♦♦ 83k
0
votes
0
answers
186
views
0
answers
Interpret contribution of regions in Partitioning heritability enrichment result
ldsc enrichment snp ld written 7 months ago by niu.shengyong • 50
0
votes
1
answer
1.1k
views
1
answer
StringDB get enrichment KEGG
enrichment kegg R written 24 months ago by Pin.Bioinf • 270 • updated 7 months ago by gragedaa • 0
2
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1
answer
1.8k
views
1
answer
Where to find *full* GO gene annotation file?
enrichment gene ontology gaf go written 2.7 years ago by iamjli • 10 • updated 8 months ago by Biostar ♦♦ 20
2
votes
1
answer
381
views
1
answer
Gene set enrichment analysis using a curated gene list and cluster DE genes
enrichment rna-seq R written 8 months ago by asmariyaz23 • 10
1
vote
1
answer
368
views
1
answer
grouping gene ontology parent-child terms
gene pathway ontology enrichment written 10 months ago by clementine • 0 • updated 8 months ago by Jean-Karim Heriche ♦ 21k
3
votes
1
answer
264
views
1
answer
GO redundancy reduction
R enrichment written 9 months ago by lessismore • 770 • updated 9 months ago by Friederike ♦ 5.4k
0
votes
1
answer
278
views
1
answer
Mutated gene based pathway enrichment
enrichment mutation written 10 months ago by CY • 470 • updated 10 months ago by H.Hasani • 880
0
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0
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273
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0
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plot Heritability Enrichment across different, diseases (GWAS data sets)
R ggplot enrichment heritability written 10 months ago by anamaria • 90
0
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0
answers
253
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0
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Gene Enrichment of a Non-Model Organism - Advice Please?
gene assembly rna-seq enrichment written 10 months ago by jstevenson2256 • 10
2
votes
1
answer
426
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1
answer
How to compute enrichment of one feature in the other across the genome (log fold, and pvalue)
genome enrichment written 11 months ago by User 7754 • 230
0
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0
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225
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0
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Protein set enrichment with protein complexes/dimers
proteomics enrichment pathway analysis written 11 months ago by bkayser • 0
0
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1
answer
517
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1
answer
Selecting the background for GO enrichment analysis (proteomics)
proteomics enrichment clusterprofiler go written 11 months ago by hesse.sebastian • 80 • updated 11 months ago by Jean-Karim Heriche ♦ 21k
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