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How to characterise a protein "enzyme", and find evolutionary divergence into two distinct pathways?

pathway proteins enzymes protocol written 5 months ago by arpankbasak • 10

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2.5k

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Identify restriction sites of a cDNA sequence using a dictionary

python biopython restriction enzymes dictionary written 4.4 years ago by albamaria.muniesa • 0 • updated 4.4 years ago by Biojl • 1.6k

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Recent Replies

C: sequence in forward seq files but not in the reverse files by genomax ♦ 59k
Error seems to be clear. For some reason your paired data files do not have the same number of re...
C: Strange MA-plot using DESeq2 by ATpoint ♦ 10k
Just out of interest, did you find out if the statement of sHeyne suggesting contamination was tr...
C: sequence in forward seq files but not in the reverse files by vongunte • 0
And this is what it sais, if I try to process all files together using make.contigs: Processing ...
C: How to save trimmomatic terminal summary to an output file? by ATpoint ♦ 10k
Agreed. Once you start using pipes (and you will/should for larger NGS data) this `&>>`...
C: GDCprepare stop working for some unknown reason by Kevin Blighe ♦ 33k
Cross-posted: https://support.bioconductor.org/p/115959/
C: get the snp sequence from dbSNP programally by Pierre Lindenbaum ♦ 115k
1) my answer is 4 years old, eutils has moved to **HTTPS** 2) "stylesheet" is, of course, the na...
C: WGCNA soft thresholding problem by Kevin Blighe ♦ 33k
If I am honest, I would take the edgeR data and go with it. Look at it this way: if you state in ...
A: sequence in forward seq files but not in the reverse files by vongunte • 0
Hello everyone. I am also using Mr.DNA data that was separated into forward and backward fastq fi...
A: Need help finding a primer for a sequence by ATpoint ♦ 10k
Often when you have a sequence with strictly defined starts and ends, you will not find an optima...
C: DESeq2 design formula: how to use the opposite interaction term? by Kevin Blighe ♦ 33k
In the example, '*TreatmentTreat.timet1*' relates to `TreatmentTreat.timet1` Versus `TreatmentUnT...
A: get the snp sequence from dbSNP programally by jenny.h2039 • 0
**When I try to enter** $ xsltproc stylesheet "http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetc...
A: Need help finding a primer for a sequence by JC ♦ 7.0k
Use Primer3, here are some webservers: - http://primer3.ut.ee/ - https://primer3plus.com/

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