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<prev • 171 results • page 1 of 6 • next >
5
votes
1
answer
189
views
1
answer
'CDS' but not 'exon' in GFF
cds gff exon rna-seq written 5 weeks ago by NielQC • 10 • updated 21 days ago by tdmurphy • 160
4
votes
1
answer
196
views
1
answer
Defining the genomic context given a genomic position
enhancer promoter intro exon rna-seq written 10 weeks ago by mike • 50 • updated 10 weeks ago by jared.andrews07 • 1.8k
1
vote
2
answers
140
views
2
answers
Align RNA-seq data to a custom list of exons?
alignment rna-seq exon written 10 weeks ago by Cumol • 40
4
votes
2
answers
273
views
2
answers
Finding exons and introns sequences
genome ensembl sequence exon intron written 12 weeks ago by elisheva • 70 • updated 11 weeks ago by vkkodali • 870
13
votes
2
answers
22k
views
10 follow
2
answers
Does TSS = first exon?
exon transcription start sites written 4.4 years ago by NHEJ • 300 • updated 3 months ago by yuktichopra675 • 0
0
votes
0
answers
200
views
0
answers
NCBI - Find gene with most exons
gene ncbi exon written 3 months ago by cosull3 • 0
0
votes
1
answer
191
views
1
answer
Tools to construct gene model
domain intron gene model exon written 5 months ago by MAPK • 1.3k • updated 5 months ago by Kevin Blighe ♦ 35k
4
votes
1
answer
168
views
1
answer
How to get a report like stuff of a bam file how many percent of the exons are coverred?
ngs bam miseq exon written 6 months ago by mhmtgenc85 • 30 • updated 6 months ago by WouterDeCoster ♦ 36k
8
votes
2
answers
302
views
2
answers
Location of intronic SNPs from exons
vep exon introns position written 6 months ago by BAGeno • 110 • updated 6 months ago by Emily_Ensembl ♦ 17k
0
votes
0
answers
175
views
0
answers
NUmber of exons and their sequnece from given cordinates
sequence exon written 6 months ago by HK • 20
0
votes
1
answer
780
views
1
answer
FeatureCounts summarizing at exon level
featurecounts rna-seq exon written 7 months ago by yamar • 0 • updated 7 months ago by dbpzdbpz • 90
13
votes
4
answers
5.3k
views
5 follow
4
answers
Annotation Of Affymetrix Human Exon St. 1.0
annotation biomart exon microarray affymetrix written 7.9 years ago by Some • 40 • updated 7 months ago by popantrop • 30
3
votes
1
answer
260
views
1
answer
Ensembl rest getting exon only Sequence.
ensembl sequence exon written 8 months ago by Ali.B • 0
11
votes
0
answers
449
views
5 follow
0
answers
How do I get the read counts for a specific exon
bam exon written 10 months ago by b10hazard • 20 • updated 10 months ago by RamRS ♦ 20k
2
votes
2
answers
1.5k
views
2
answers
How to get exon number from position from script?
rest api exon written 3.7 years ago by sacha • 1.6k • updated 11 months ago by Biostar ♦♦ 20
3
votes
1
answer
2.6k
views
1
answer
Creation Of Exoncountset In Dexseq
ensembl exon written 5.6 years ago by alittleboy • 210 • updated 12 months ago by Biostar ♦♦ 20
4
votes
2
answers
383
views
2
answers
The exon of a variant
vcf exon written 12 months ago by Dayna • 20 • updated 12 months ago by JC ♦ 7.2k
0
votes
0
answers
529
views
0
answers
Mapping from Human Exon 1.0 ST probeset IDs to Ensembl exon IDs
exon probeset id mapping human exon 1.0 st written 12 months ago by sevenless • 0
4
votes
1
answer
873
views
1
answer
Bulk download introns, exons, and UTR regions from Ensembl for gene prediction training set
annotation sequence intron exon ensembl written 12 months ago by Katherine Huang • 0 • updated 12 months ago by Brian Gudenas • 90
1
vote
1
answer
912
views
1
answer
de novo exon-exon junction identification tool from transcriptome assembly
genome assembly next-gen rna-seq exon written 2.6 years ago by hamzakhanvit • 10 • updated 12 months ago by mbens • 100
0
votes
0
answers
446
views
0
answers
Reference annotation file contains only transcript and CDS information, how to analyze the different expression of genes?
cds exon rna-seq written 14 months ago by zoukai3412085 • 0
0
votes
1
answer
1.3k
views
1
answer
Binning Exon And Plotting Read Densities (Bed Regions) With In And Around Binned Exons
exon written 7.5 years ago by Repineme • 110 • updated 14 months ago by kashifalikhan007 • 40
0
votes
0
answers
547
views
0
answers
strand information issue for overlapping exons
alignment rna-seq exon written 14 months ago by prasundutta87 • 300
32
votes
3
answers
17k
views
9 follow
3
answers
Exon Coordinates Of Hg19 Genome Download
exon coordinates human hg written 7.9 years ago by Neeraj • 150 • updated 15 months ago by Biostar ♦♦ 20
1
vote
1
answer
1.1k
views
1
answer
exon level quantification using htseq count
htseq-count exon quantifications rna-seq written 16 months ago by komal.rathi • 3.3k • updated 16 months ago by Devon Ryan ♦ 87k
2
votes
0
answers
822
views
0
answers
How to interpret DEXseq results in therms of significance
dexseq exon rna-seq written 16 months ago by Lila M • 410
0
votes
0
answers
812
views
0
answers
how to use DEXSeq with raw exon count matrix downloaded from TCGA
dexseq R exon rna-seq written 17 months ago by ren.yingxue • 0 • updated 16 months ago by Biostar ♦♦ 20
11
votes
2
answers
692
views
2
answers
If i am interested in a transcription factor, why would i focus on coding and non coding SNPs?
enhancer promoter snp exon transcription written 17 months ago by mesencephalon • 0 • updated 17 months ago by Emily_Ensembl ♦ 17k
1
vote
0
answers
589
views
0
answers
How to access up-to-date exon data from GTEx project
rnaseq exon gtex isoform tissue-specific written 17 months ago by vlrieg • 10
1
vote
1
answer
713
views
1
answer
Obtaining .bed list of exons of chr17
bed exon written 19 months ago by marghe08 • 10 • updated 17 months ago by Alex Reynolds ♦ 27k
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