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Failure in extracting reads from bam file due to unknown reference
extraction alignment reference bam written 4 days ago by marongiu.luigi • 420
2
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2
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284
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2
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How can I Extract PMID only for a query in a text file while searching it on NCBI pubmed?
sequence alignment extraction next-gen literature written 8 months ago by genious.kalia.141198 • 0 • updated 6 weeks ago by mrpfd3v • 0
4
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1
answer
372
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1
answer
Extracting contaminated reads from the sequenced data
genome illumina extraction sequencing written 10 months ago by manjumoorthy95 • 20 • updated 10 months ago by genomax ♦ 74k
4
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0
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818
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5 follow
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grep/awk issue: can't extract sequences from a fasta file
fasta extraction sequence grep shell written 17 months ago by benoit.kunath • 10 • updated 12 months ago by Biostar ♦♦ 20
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258
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Features extraction from protein 3D structures
features extraction 3d strcuture proteins written 12 months ago by biotechuos4 • 0
4
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4
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3.5k
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6 follow
4
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Extract Only Paired-End Reads That Map A Specific Interval
bedtools extraction written 7.2 years ago by Nicolas Rosewick ♦ 8.3k • updated 13 months ago by pnatsidis • 0
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1
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268
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1
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Extract sequences which do not have blast hits
extraction sequence rna-seq blast written 14 months ago by karthic • 100
5
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1
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1.2k
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1
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subgraph extraction based on the edges weights and graph connectivity
R extraction subgraph weight graph written 16 months ago by arronar • 200 • updated 16 months ago by ejm32 • 440
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719
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Extraction of 16S hypervariable regions
software 16s hypervariable regions extraction written 24 months ago by jerald • 0
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1
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1.3k
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1
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Extracting Protein Sequences
extraction sequence protein written 8.1 years ago by Hari • 250 • updated 2.2 years ago by Biostar ♦♦ 20
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5
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3.1k
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5 follow
5
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How to extract contigs from FASTA file which contains specific sequence
fasta find extraction contig written 4.9 years ago by Paul • 1.3k • updated 2.2 years ago by Brian Bushnell ♦ 16k
3
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3
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1.2k
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3
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how to extract a random set of SNP from a SNP table
extraction random sample snp written 2.5 years ago by Ana • 170 • updated 2.5 years ago by Alex Reynolds ♦ 29k
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1.9k
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SNPSift Genotype Extraction
snpsift extraction genotype written 4.5 years ago by anon123 • 10 • updated 4.5 years ago by Biostar ♦♦ 20
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4
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2.9k
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7 follow
4
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Partial Cds Extraction From Incomplete Transcripts
cds extraction rna written 7.9 years ago by Raghul • 200 • updated 5.2 years ago by Biostar ♦♦ 20
1
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4
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3.2k
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5 follow
4
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Get All Alleles Of 1 Column In Bam File
read extraction bam position written 8.0 years ago by Manon Delahaye • 10 • updated 5.6 years ago by guns.guru • 50
0
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1
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4.2k
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1
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Motif Extraction Using R Package?
bioinformatics extraction motif R written 6.0 years ago by p2011001 • 0 • updated 6.0 years ago by Ashwin • 70
3
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1
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3.3k
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1
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Extracting The Features From Genbank File
extraction feature genbank written 6.3 years ago by ancient_learner • 610 • updated 6.2 years ago by Biostar ♦♦ 20
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2
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2.4k
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6 follow
2
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How To Extract Only Geneid From Fasta Header?
fasta perl extraction sequence written 6.3 years ago by Abdul Rawoof • 60 • updated 6.3 years ago by Kenosis • 1.2k
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3
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4.0k
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3
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A Way To Get Dna Sequence From Specific Coordinates Using An Online Service
extraction sequence written 6.5 years ago by KCC • 4.0k • updated 6.5 years ago by Pierre Lindenbaum ♦ 124k
22
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4
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3.8k
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7 follow
4
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How To Join Text Files By A Certain Column (Accession Id)
extraction written 6.8 years ago by 2011101101 • 100 • updated 6.8 years ago by Sebastian Kurscheid • 300
6
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1
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4.4k
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1
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Sra Toolkit For Pacbio
sra extraction written 6.9 years ago by Lee Katz • 3.0k • updated 6.9 years ago by osullivanchristopher • 190
9
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1
answer
1.3k
views
1
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Matching The Entries And Printing Data
sequence extraction id script written 7.1 years ago by Nandini • 830 • updated 7.1 years ago by a.zielezinski ♦ 8.9k
11
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3
answers
6.5k
views
7 follow
3
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Help Me Finish This Perl Code To Extract A Column In A Table
perl data extraction written 7.1 years ago by shane.neeley • 50 • updated 7.1 years ago by Irsan • 7.0k
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1
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2.0k
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1
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Contig Extraction From .Ace File
assembly extraction metagenomics written 7.1 years ago by zimmlerten • 0 • updated 7.1 years ago by Ketil ♦ 4.0k
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1
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3.8k
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1
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[Help]: Extracting Sequence From Fasta Using Blast Informations?
fasta python extraction biopython blast written 7.3 years ago by francois.maginiot • 10
21
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2
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20k
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7 follow
2
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How To Extract Set Of Reads From Fastq (Or Eventually Fasta And Qual) Based On List Of Ids?
fasta read extraction 454 fastq written 7.5 years ago by Biomonika (Noolean) ♦ 3.1k • updated 7.5 years ago by Martin A Hansen ♦ 3.0k
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1
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1.2k
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1
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Experiment Data
data extraction written 7.5 years ago by Plasmid • 160 • updated 7.5 years ago by seidel ♦ 6.8k
25
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1
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20k
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6 follow
1
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How To Use Bedtools To Extract Promoters From A Mouse Bed File
bedtools bed extraction promoter fasta written 7.8 years ago by Anima Mundi • 2.5k • updated 7.8 years ago by Aaronquinlan ♦ 11k
13
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3
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7.1k
views
12 follow
3
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How To Extract Random Snps From Whole Genome Data?
extraction snp written 7.8 years ago by User 1793 • 40 • updated 7.8 years ago by Caddymob • 960
1
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1
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1.7k
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1
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Extract A Subrange Of Sequences From A Genbank File
extraction genbank written 7.9 years ago by Iván • 20 • updated 7.9 years ago by Pierre Lindenbaum ♦ 124k
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