Showing: fastq-dumpreset
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Method to Check Fastq Completeness after Fastq-dump
fastq-dump completeness written 23 months ago by Shicheng Guo7.3k • updated 8 hours ago by ATpoint11k
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How do you use MultiQC on FastQC files taken from SRA files?
sra galaxy fastq-dump multiqc fastqc written 3 days ago by beneopp0 • updated 10 hours ago by Phil Ewels150
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how do I split fastq from SRA?
split-fastq sra fastq-dump rna-seq written 8 weeks ago by jaqx00840 • updated 8 weeks ago by piyushjo80
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5 follow
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how to deal with sra files which can generate three fastq files?
sra fastq fastq-dump written 8 weeks ago by fanglujing30 • updated 8 weeks ago by t.kuilman710
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fastq-dump split-spot and skip-technical
skip-technical fastq-dump split-spot written 2.8 years ago by Shicheng Guo7.3k • updated 12 weeks ago by RamRS19k
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How to wake up fastq-dump --split 3 process?
htop fastq-dump rna-seq written 5 months ago by Cy0 • updated 5 months ago by ATpoint11k
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Converting a bunch or SRA files using fastq-dump split-files
ncbi sra split-files fastq-dump written 6 months ago by Mitra0 • updated 6 months ago by ATpoint11k
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Paired-end SRA experiment, two samples come out as single-end
sra fastq-dump rna-seq written 10 months ago by xarielle0 • updated 10 months ago by Istvan Albert ♦♦ 78k
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problem in fastq-dump of SRA file
sra fastq-dump written 11 months ago by majeedaasim20 • updated 11 months ago by jomo018450
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Is it OK to use --split-files option in fastq-dump when processing SE data?
fastq-dump written 18 months ago by biolab1.1k • updated 18 months ago by Devon Ryan86k
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fastq dump error
sra sra toolkit fastq-dump written 2.0 years ago by Satyajeet Khare1.3k • updated 2.0 years ago by piet1.6k
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Problem while downloading RNAseq data from NCBI via command line
sra toolkit fastq-dump rna-seq written 2.4 years ago by BCArg60 • updated 2.4 years ago by microfuge950
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help with fastq-dump
sratool fastq-dump written 2.5 years ago by tsai.1410
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Tutorial: How to extract fastq files from SRA data that contains both paired and unpaired reads
sra tutorial fastq-dump written 2.7 years ago by t.kuilman710 • updated 2.7 years ago by Istvan Albert ♦♦ 78k
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SRAtoolkit error during fastq-dump
software error sratoolkit fastq-dump chip-seq written 2.8 years ago by dally160 • updated 2.8 years ago by piet1.6k
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fastq-dump split-3 output
sra fastq-dump written 3.3 years ago by colonppg90
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fastq-dump stream to named pipe (fifo) to Trinity
next-gen fastq-dump rna-seq sequencing written 4.0 years ago by glarue20 • updated 3.3 years ago by Biostar ♦♦ 20
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