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<prev • 143 results • page 1 of 5 • next >
2
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203
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Trimming Overrepresented Sequences in paired-end RNA-Seq data, as underlined by FastQC.
paired-end rna-seq fastqc written 10 days ago by Shaurya Jauhari • 40 • updated 10 days ago by genomax ♦ 32k
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0
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137
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k-mer overrepresentation of WGS Illumina reads
k-mer trimmomatic adapter trimming fastqc written 11 days ago by Anand Rao • 70
2
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1
answer
161
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1
answer
Interpreting pre- and post-trim_galore FastQC results
illumina adapter trimming fastqc written 25 days ago by Anand Rao • 70 • updated 25 days ago by genomax ♦ 32k
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2
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166
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2
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align spike in database
bowtie2 spike-in rna-seq fastqc written 29 days ago by mail4malla • 0 • updated 28 days ago by swbarnes2 ♦ 2.8k
1
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184
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FASTQC Per base sequence quality fail after removal of adaptors
small rna seq srna adaptor mirna fastqc written 28 days ago by ALEX • 0
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1
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123
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1
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How to see what percentage of reads remain after quality filter to a certain phred score
quality control phred rna-seq fastqc written 29 days ago by nikelle.petrillo • 70
1
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1
answer
143
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1
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FastQC kmer content output
kmer rna-seq fastqc written 5 weeks ago by Maria • 0 • updated 5 weeks ago by Istvan Albert ♦♦ 73k
1
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200
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0
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Cutadapt and FastQC
ngs cutadapt rna-seq fastqc written 6 weeks ago by bioinformaticsfilesdrive • 0
3
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0
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207
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0
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No change in number of reads and quality after removing rRNA contamination using sortmerna
seqmonk sortmerna rna-seq fastqc written 7 weeks ago by Sumit Paliwal • 20
2
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1
answer
171
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1
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fastqc gc-content peak and adapter content
fastqc written 9 weeks ago by David • 50
2
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1
answer
174
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1
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FastQC low %A in per base sequence content
rna-seq fastqc written 9 weeks ago by Duff • 620 • updated 9 weeks ago by harold.smith.tarheel • 3.7k
2
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148
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0
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What could be the best explanation for a dip in phred quality score at the near beginning of reads?
trimmomatic illumina quality phred fastqc written 9 weeks ago by Vijay Lakhujani • 1.1k
2
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1
answer
145
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1
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Difference in duplicate number with samtools flagstat and multiqc/fastqc
duplicates fastqc samtools multiqc chipseq written 11 weeks ago by ZheFrench • 40
6
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1
answer
365
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1
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fastqc: kmer-content failed
kmer-content fail fastqc written 3 months ago by shuchen • 10
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223
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rnaseq sequence analysis and trimming
trimmomatic fastqc rna-seq cutadapt written 3 months ago by mail4malla • 0 • updated 3 months ago by WouterDeCoster ♦ 20k
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228
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0
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Please advise me on PE sequencing reads prepared by NEBNex kit and Hiseq2000
illumina adapter length nebnex kit fastqc written 4 months ago by seta • 920
5
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2
answers
862
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2
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Fastqc result collection script
fastqc written 21 months ago by Shicheng Guo • 4.4k • updated 4 months ago by h.mon ♦ 8.0k
10
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2
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1.1k
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2
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Why is FastQC not working after using Trim galore?
fastq fastqc written 12 months ago by beausoleilmo • 100 • updated 4 months ago by h.mon ♦ 8.0k
1
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204
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0
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trimming reads from miseq
duplcation level miseq trim fastqc written 4 months ago by mary • 0
0
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0
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172
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0
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FASTQC problem - repetitive k-mer
kmer rna-seq fastqc written 4 months ago by blur • 50
1
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1
answer
360
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1
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FastQC in R
R rna-seq fastqc written 4 months ago by rjames • 0 • updated 4 months ago by James Ashmore • 1.9k
1
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354
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0
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Fastqc 0.67 errors while Fastqc 0.64 does not
fastqc written 7 months ago by rjames • 0
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1
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209
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1
answer
fastQC - case of the anomalous last base
rna-seq fastqc written 5 months ago by wasphunter • 0 • updated 5 months ago by Grinch • 0
4
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1
answer
330
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1
answer
How to identify adapters in FASTQ file?
ngs rna-seq fastqc written 5 months ago by barrypraveen • 0 • updated 5 months ago by WouterDeCoster ♦ 20k
0
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0
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161
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0
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Prinseq running error
fastqc written 5 months ago by snanda73 • 0 • updated 5 months ago by WouterDeCoster ♦ 20k
23
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4
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670
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7 follow
4
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Tool: FastQt : a clone of FastQC in C++/Qt
fastq fastqc tool qt cpp written 8 months ago by sacha • 770
3
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3
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376
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3
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Filtering Overlapping Paired-end Reads
illumina ngs fastqc written 6 months ago by ScubaChris • 10
2
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2
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3.4k
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2
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FastQC not making html output report.
adapter trim ngs qc rna-seq fastqc written 15 months ago by Shahzad • 10 • updated 6 months ago by mafer_309 • 0
1
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1
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234
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1
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per tile sequence quality decreases after QC with sickle
fastqc sickle per tile sequence quality written 6 months ago by mary • 0
3
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1
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360
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1
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How to clean bad tiles from Illumina reads?
illumina quality rna-seq trim fastqc written 6 months ago by blazer9191 • 0 • updated 6 months ago by harold.smith.tarheel • 3.7k
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