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<prev • 190 results • page 1 of 7 • next >
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Explanation for kmer enrichment after skewer trimming of the RNA-seq reads
skewer kmer fastqc written 2 days ago by tobytaogf • 0 • updated 2 days ago by genomax ♦ 62k
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96
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CG content changed after trimming the adaptors
rna-seq fastqc written 7 days ago by kintany • 10
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78
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why FastQC tool K-mer content parameter is absent?
k-mer fastqc fastp wts afterqc written 25 days ago by esraesmeray1990 • 10
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1
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98
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1
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Overrepresented stretches of Gs in NovaSeq library
fastqc sequencing dna written 26 days ago by serpalma.v • 20 • updated 26 days ago by michael.ante • 3.0k
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157
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Filtering and Trimming Metagenomic Data
metagenomics prinseq microbial fastqc written 8 weeks ago by MK2000 • 10 • updated 6 weeks ago by Biostar ♦♦ 20
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137
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Problem in Sequence Length Distribution
trimmomatic quality sequence lenght fastqc written 7 weeks ago by vitorgomesbio • 0
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Forum: Using Fastqc To Check The Quality Of High Throughput Sequence
forum qc fastqc written 6.8 years ago by Istvan Albert ♦♦ 79k • updated 7 weeks ago by boneheadphone • 0
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1
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229
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1
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How do you use MultiQC on FastQC files taken from SRA files?
sra galaxy fastq-dump multiqc fastqc written 10 weeks ago by beneopp • 0 • updated 9 weeks ago by Phil Ewels • 150
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2
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753
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2
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Difference in duplicate number with samtools flagstat and multiqc/fastqc
duplicates fastqc samtools multiqc chipseq written 20 months ago by ZheFrench • 190 • updated 10 weeks ago by Phil Ewels • 150
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133
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diffrence between number of reads in fastqc reports and collectalignmentsummarymetrics of Picard
reads picard bam fastqc written 11 weeks ago by kk.mahsa • 80
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1
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442
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7 follow
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Bash scripting FastQC for multiple fastq files in multiple directories
bash rna-seq fastqc written 3 months ago by rc1253 • 20 • updated 3 months ago by Paul • 1.3k
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1
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202
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1
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Per base GC content with a shoulder after adapter removal and trimming
gc content fastqc written 4 months ago by serpalma.v • 20
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1
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334
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1
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Next-Seq sequences map poorly to ref genome
sequencing cel-seq2 rna-seq fastqc written 5 months ago by exin • 50 • updated 5 months ago by genomax ♦ 62k
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1
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195
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1
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miRNA-seq quality drops at certain positions
quality mirna rna-seq fastqc written 5 months ago by kim.malek90 • 0 • updated 5 months ago by genomax ♦ 62k
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1
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358
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1
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Fatal error fastQC on ubuntu
java fastqc written 7 months ago by b.nota ♦ 6.0k
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0
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281
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Find adapter sequences
fasta adapter sequencing fastq fastqc written 7 months ago by science_lizard • 0
3
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1
answer
325
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1
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Quality control issues for mRNA sequencing fastq files based on FastQC, based on Per Base Sequence Content
mrnasequencing sequence rna-seq fastqc written 7 months ago by svlachavas • 560 • updated 7 months ago by WouterDeCoster ♦ 36k
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1
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534
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1
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Fix per tile sequence quality?
dnaseq quality control fastqc illumina written 7 months ago by serpalma.v • 20 • updated 7 months ago by genomax ♦ 62k
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2
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380
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2
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Differences between FastQC duplication levels for paired fastq and bam files.
rna-seq fastqc written 7 months ago by achernomoretz • 0
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440
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kmer content changes after trimming and removing adapters from reads
trimmomatic dnaseq fastqc written 7 months ago by serpalma.v • 20
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346
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5 follow
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I get almost the same fastqc report for a fastq file before and after using TrimGalore
trimgalore fastqc written 9 months ago by mohamedrefaat.1.1992 • 0 • updated 7 months ago by Biostar ♦♦ 20
3
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1
answer
621
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1
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Installing MultiQC on Ubuntu
ngs multiqc fastqc written 7 months ago by m93 • 140 • updated 7 months ago by andrew.j.skelton73 ♦ 5.5k
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2
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2.0k
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6 follow
2
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FastQC with multiple FASTQ files
ngs multiple fastqc written 7 months ago by m93 • 140 • updated 7 months ago by drkennetz • 360
6
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2
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427
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5 follow
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mRNA-seq quality report (fastQC): Does it mean samples have adapters and should remove duplicates?
adapters duplicates rna-seq fastqc written 8 months ago by salamandra • 180 • updated 8 months ago by Charles Warden ♦ 6.1k
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Removing Illumina Single End PCR Primers and TruSeq Adapters
adapter removal dna-seq primer truseq fastqc written 8 months ago by serpalma.v • 20 • updated 8 months ago by genomax ♦ 62k
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3
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737
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5 follow
3
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Filtering rRNA from RNAseq data
rrna sortmerna rna-seq fastqc written 8 months ago by rsafavi • 40
1
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1
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474
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1
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Analyzing FastQC report
rna-seq fastqc written 8 months ago by rsafavi • 40
1
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0
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408
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ChIP Seq poor mapping quality and strange fast QC result
alignment chip-seq fastqc written 8 months ago by e0223167 • 10
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1
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373
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1
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Per tail sequence quality fail
quality tile fastqc written 8 months ago by bwczech • 60 • updated 8 months ago by Devon Ryan ♦ 88k
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368
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0
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Per base sequence quality and per base N content
quality fastqc written 9 months ago by bwczech • 60
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