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<prev • 164 results • page 1 of 6 • next >
2
votes
0
answers
127
views
5 follow
0
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I get almost the same fastqc report for a fastq file before and after using TrimGalore
trimgalore fastqc written 5 days ago by mohamedrefaat.1.1992 • 0
0
votes
0
answers
95
views
0
answers
Per base sequence quality and per base N content
quality fastqc written 6 days ago by bwczech • 0
3
votes
0
answers
105
views
0
answers
Cannot run FASTQC on terminal
module fastqc written 10 days ago by fatin nadhirah • 0
6
votes
2
answers
104
views
2
answers
Gene Expression data and variants from the same fastq raw file
fastq gene expression variant analysis fastqc written 4 weeks ago by gemini.venkat • 0 • updated 4 weeks ago by Michael Dondrup ♦ 44k
3
votes
0
answers
411
views
0
answers
fastqc report for degradome reads
adaptor fastqc written 7 weeks ago by Sam • 70
1
vote
1
answer
153
views
1
answer
one sample from pool shows low quality at the end, why?
fastqc written 10 weeks ago by CY • 130
3
votes
0
answers
362
views
0
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High A in "Per base sequence content" of fastQC report
fastqc written 11 weeks ago by DVA • 430
1
vote
0
answers
362
views
0
answers
fastqc "Too many tiles (>500) so giving up trying to do per-tile qualities since we're probably parsing the file wrongly"
qc fastqc written 11 weeks ago by josh.cutts1 • 0
3
votes
1
answer
193
views
1
answer
Getting just fastqc.zip file?
rna-seq fastqc written 12 weeks ago by star • 50 • updated 11 weeks ago by vinay.rs • 0
9
votes
4
answers
5.9k
views
4
answers
Is Paired End analysis possible with FASTQC?
paired-end dna-seq qc fastqc written 2.1 years ago by chefarov • 80 • updated 3 months ago by Stephane Plaisance • 360
10
votes
3
answers
4.5k
views
3
answers
FastQC Error Problem
server ubuntu error fastqc written 2.7 years ago by Abdul Rafay Khan • 810 • updated 3 months ago by Biostar ♦♦ 20
8
votes
1
answer
500
views
5 follow
1
answer
fastqc adapter content
sequencing quality control fastqc written 3 months ago by prasundutta87 • 170 • updated 3 months ago by genomax ♦ 48k
3
votes
2
answers
1.0k
views
8 follow
2
answers
FastQC in R
R rna-seq fastqc written 14 months ago by rjames • 10 • updated 4 months ago by eculfa • 0
0
votes
1
answer
281
views
1
answer
fastqc file showing bad result for tile kmer
wgs tile kmer fail fastqc written 4 months ago by analytical • 0 • updated 4 months ago by YaGalbi • 1.1k
14
votes
2
answers
684
views
6 follow
2
answers
How to repair *all* problems identified by FastQC?
rna-seq fastqc written 5 months ago by dec986 • 90 • updated 5 months ago by Ian ♦ 5.2k
0
votes
1
answer
300
views
1
answer
how to fix Kmer count from FastQC?
rna-seq fastqc written 5 months ago by dec986 • 90 • updated 5 months ago by realnewbie • 10
5
votes
0
answers
430
views
0
answers
Should I remove all the overrepresented sequences to improve GC content in fastqc?
fastqc rna-seq single-end overrepresented written 5 months ago by Lila M • 370
7
votes
0
answers
320
views
0
answers
Solutions to FastQC diagnosis of Micro-Satellites
rna-seq fastqc written 5 months ago by dec986 • 90
3
votes
1
answer
731
views
1
answer
how to remove Overrepresented sequences for paired end with cutadapt?
trimming fastqc paired-end rna-seq cutadapt written 7 months ago by Lila M • 370
2
votes
1
answer
325
views
1
answer
tophat equal length problem
tophat equal length fastqc written 7 months ago by HK • 20 • updated 7 months ago by Nicolas Rosewick • 6.3k
11
votes
2
answers
616
views
5 follow
2
answers
over presented kmer in fastq
rna-seq fastqc written 7 months ago by Sam • 70
0
votes
1
answer
435
views
1
answer
Sequence length distribution after adapter trimming
adapter trimming bbduk fastqc written 7 months ago by lamteva.vera • 120
9
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3
answers
647
views
5 follow
3
answers
Extract basic info from fastq files in an efficient way?
fastq fastqc written 8 months ago by rioualen • 260 • updated 8 months ago by h.mon ♦ 15k
7
votes
3
answers
878
views
5 follow
3
answers
Post alignment QC of RNA-seq data
qc fastqc written 8 months ago by KVC_bioinfo • 310 • updated 8 months ago by Brian Bushnell ♦ 15k
4
votes
3
answers
6.2k
views
3
answers
FastQC not making html output report.
adapter trim ngs qc rna-seq fastqc written 2.1 years ago by Shahzad • 10 • updated 8 months ago by Philipp Bayer ♦ 5.4k
1
vote
1
answer
944
views
1
answer
Help with Fastqc error
htsjdk fastqc written 21 months ago by mink2mink2 • 0 • updated 9 months ago by Ram ♦ 15k
2
votes
0
answers
782
views
0
answers
Trimming Overrepresented Sequences in paired-end RNA-Seq data, as underlined by FastQC.
paired-end rna-seq fastqc written 9 months ago by Shaurya Jauhari • 40 • updated 9 months ago by genomax ♦ 48k
0
votes
0
answers
512
views
0
answers
k-mer overrepresentation of WGS Illumina reads
k-mer trimmomatic adapter trimming fastqc written 9 months ago by Anand Rao • 110
4
votes
1
answer
716
views
1
answer
Interpreting pre- and post-trim_galore FastQC results
illumina adapter trimming fastqc written 10 months ago by Anand Rao • 110 • updated 10 months ago by genomax ♦ 48k
0
votes
2
answers
458
views
2
answers
align spike in database
bowtie2 spike-in rna-seq fastqc written 10 months ago by Björn • 20 • updated 10 months ago by swbarnes2 ♦ 3.6k
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