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0
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over-representation of sequences that map to "Drosophila melanogaster signal recognition particle
srp representation trap-seq rna-seq fastqc written 6 days ago by DataFanatic • 240
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1
answer
84
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1
answer
How to put CutAdapt in path for running TrimGalore?
fastqc trimgalore cutadapt written 15 days ago by james.galske • 0 • updated 15 days ago by Shalu Jhanwar • 350
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1
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67
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1
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Issues analysing splitted fastq files with fastqc
fastqc written 16 days ago by youssef.snoussi1994 • 0 • updated 16 days ago by benformatics • 1.7k
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2
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102
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5 follow
2
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fastqc result: whether trim off low quality reads or not
multiqc quality_check fastqc written 27 days ago by dpc • 140 • updated 27 days ago by swbarnes2 ♦ 8.1k
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100
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1
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Share FastQC results on GitLab
fastqc html markdown gitlab written 5 weeks ago by vincentpailler • 140 • updated 5 weeks ago by Pierre Lindenbaum ♦ 129k
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118
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FASTQC result FAILED in adapter content and k-mer section!!!
wgs quality control fastqc written 8 weeks ago by dpc • 140
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1
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5 follow
1
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fastqc "Too many tiles (>500) so giving up trying to do per-tile qualities since we're probably parsing the file wrongly"
qc fastqc written 2.4 years ago by josh.cutts1 • 10 • updated 8 weeks ago by alexgongfy • 0
1
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0
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115
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0
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Bimodal %GC plot of fastqc output in RNASeq
rice illumina rna-seq %gc fastqc written 9 weeks ago by devbt15 • 10 • updated 9 weeks ago by ATpoint ♦ 36k
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121
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Quality of RNA Seq data
fastqc rna-seq sequencing written 11 weeks ago by ashwin.koppayi • 0
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What is the importance of checking per base sequence content and per sequence GC content during Quality Control of NGS reads?
fastqc next-gen sequencing written 15 months ago by Cookie-san • 90 • updated 3 months ago by Biostar ♦♦ 20
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1
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117
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1
answer
fastq file sub-sampling during per position quality score graphing
fastx_toolkit fastqc written 3 months ago by Anand Rao • 310
0
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137
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0
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over-represented is not removed after trimmomatic
trimmomatic fastqc written 3 months ago by DataFanatic • 240
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141
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How to deal with the error for "Per Sequence GC Content" in FastQC tool?
genome sequence next-gen sequencing fastqc written 4 months ago by Negin • 0
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306
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cutting overrepresented sequences (recognized by fatsqc)
genome sequencing sequence genome-sequence fastqc written 4 months ago by Negin • 0
7
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3
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183
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3
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Sequencing PHRED quality confusion
illumina 1.5 illumina 1.9 fastqc written 4 months ago by piyushjo • 520 • updated 4 months ago by Istvan Albert ♦♦ 84k
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0
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439
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0
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Per Base Sequence Content
genome sequencing sequence fastqc written 4 months ago by Negin • 0 • updated 4 months ago by wm • 470
3
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1
answer
150
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5 follow
1
answer
Per base sequence content: "A" underrepresented
rna-seq fastqc written 4 months ago by Wöps • 10 • updated 4 months ago by genomax ♦ 87k
1
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1
answer
271
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1
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ATAC-Seq kmer removal
kmers fastqc atac-seq trim cutadapt written 5 months ago by elenichri • 10 • updated 5 months ago by h.mon ♦ 30k
6
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0
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430
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Big difference in estimated duplicate reads between forward and reverse of paired-end RNA-seq
duplication rna-seq fastqc written 8 months ago by Eric Lim • 1.7k • updated 6 months ago by Biostar ♦♦ 20
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3
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2.3k
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3
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Do I have to check every fastqc to make good quality?
gene fastq sequencing rna-seq fastqc written 4.2 years ago by khaeuk • 80 • updated 7 months ago by Biostar ♦♦ 20
0
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246
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0
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Help Troubleshooting FASTQC
troubleshoot metagenomic fastqc written 7 months ago by mac03pat • 30 • updated 7 months ago by yztxwd • 390
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0
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200
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Read quality only 14
sequencing quality quality score identical fastqc written 7 months ago by ericjanhoekstra • 0 • updated 7 months ago by genomax ♦ 87k
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1
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5 follow
1
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How do you use MultiQC on FastQC files taken from SRA files?
sra galaxy fastq-dump multiqc fastqc written 20 months ago by beneopp • 0 • updated 7 months ago by dgpiury • 0
2
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0
answers
441
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0
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not able to run Fastqc in Centos server
genomics fastqc written 8 months ago by sunnykevin97 • 50 • updated 8 months ago by genomax ♦ 87k
5
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1
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256
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1
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What is the best tool for doing Quality Control checks on my raw RNA-seq data?
qc rna-seq fastqc written 8 months ago by anamaria • 100 • updated 8 months ago by adam.faranda • 80
2
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0
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727
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3' Tag-Seq / DE Analysis - FASTQC detects overrepresented sequences as well as fails per base & GC sequence content
trimmomatic tag-seq sortmerna rna-seq fastqc written 9 months ago by gmchaput • 10
4
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2
answers
2.8k
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2
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Installing MultiQC on Ubuntu
ngs multiqc fastqc written 2.1 years ago by m93 • 240 • updated 9 months ago by Phil Ewels • 560
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403
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1
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Problem with N sequences in fastqc file
fastq fastqc written 9 months ago by carina2817 • 20 • updated 9 months ago by yztxwd • 390
1
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1
answer
938
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1
answer
FastQC wont run
windows fastqc written 9 months ago by anna • 0 • updated 9 months ago by hugo.avila • 40
1
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1
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289
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1
answer
miRNA fastqc sequence length distribution with UMI
qiagene trimming fastqc mirna cutadapt written 10 months ago by maria2019 • 100 • updated 10 months ago by swbarnes2 ♦ 8.1k
<prev • 255 results • page 1 of 9 • next >
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