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<prev • 47 results • page 1 of 2 • next >
3
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283
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FASTX Trimming First and Last X Bases
fastq fastx trimming written 11 months ago by gtasource • 60 • updated 11 months ago by genomax ♦ 89k
3
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0
answers
348
views
0
answers
fastx_reverse_complement truncating files?
reverse compliment fastx rna-seq written 19 months ago by miyagi • 0 • updated 19 months ago by ATpoint ♦ 38k
0
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1
answer
560
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1
answer
Fastx quality filtering error
software error fastx written 19 months ago by athira112athira • 10 • updated 19 months ago by finswimmer ♦ 13k
0
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0
answers
1.0k
views
0
answers
Filtering Read Quality - Cant remove all reads that have a single base below a threshold
filter fastx quality-score sequencing written 21 months ago by tbb21 • 10 • updated 19 months ago by Biostar ♦♦ 20
4
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2
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1.1k
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2
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convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to_fasta
fasta fastq fastx emboss conversion written 22 months ago by marongiu.luigi • 520 • updated 22 months ago by finswimmer ♦ 13k
2
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1
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722
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5 follow
1
answer
FastX toolkit - problems with Collapser
collapser fastx rna-seq written 2.2 years ago by jcarlosariute • 0
3
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1
answer
2.1k
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1
answer
fastq_quality_trimmer: Premature End-Of-File
fastx fastq_quality_trimmer written 3.3 years ago by blur • 140 • updated 3.3 years ago by Charles Plessy • 2.7k
6
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2
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3.2k
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6 follow
2
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RESOLVED: libgtextutils make error : FASTX toolkit
ngs fastx 16s rrna genomics rna-seq written 3.5 years ago by prathyushakonda • 20 • updated 3.5 years ago by Charles Plessy • 2.7k
2
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1
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1.6k
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1
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Fastx_reverse_complement error. Invalid quality score even with -Q33
fastq fastx reverse-complement written 3.6 years ago by roblogan6 • 30
4
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1
answer
2.6k
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5 follow
1
answer
Fastx_toolkit with nanopore data
fasta fastq fastx nanopore written 3.6 years ago by glgowers • 10 • updated 3.6 years ago by Botond Sipos • 1.7k
2
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1
answer
1.5k
views
1
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PE reads uneven after cutadapt
fastx bowtie written 3.9 years ago by blur • 140 • updated 3.9 years ago by dariober ♦ 11k
0
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0
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1.4k
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0
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FASTX error - quality score
fastx written 3.9 years ago by blur • 140
0
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0
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2.6k
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0
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bowtie "Saw ASCII character -54 but expected 33-based Phred qual." after -Q 33 fastx reverse complement
fastx rna-seq bowtie written 4.0 years ago by gufernandez10 • 10
0
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1
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2.6k
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1
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Help needed using FastX toolkit: Segmentation fault
fastx quality-control written 4.8 years ago by Angelo Victoria • 30 • updated 4.8 years ago by p.papathanos • 0
0
votes
0
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977
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0
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fastx issue with reverse_complement , change in overepresented sequences
fastq fastx rna-seq written 5.0 years ago by gufernandez10 • 10
1
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1
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2.1k
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1
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Fastx toolkits: fastq_quality_filter does not discart any read
toolkit fastx quality_filter discart written 5.0 years ago by DVR • 20 • updated 4.8 years ago by zorbax • 190
2
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1
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2.1k
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1
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Fastx toolkits: Problems with fastq_quality_boxplot_graph.sh
boxplot fastx written 5.0 years ago by DVR • 20
2
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1
answer
1.4k
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1
answer
Q33 in fastx_clipper
fastx q33 rna-seq written 5.3 years ago by EVR • 570 • updated 4.2 years ago by Biostar ♦♦ 20
3
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2
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4.1k
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2
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Filtering sanger_fastq, illumina_fastq files using Fastx-Toolkit
illumina fastq fastx filtering written 5.5 years ago by bioinfo • 790
0
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2
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1.7k
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2
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How many poor quality bases define a bad read (using fastx or equivalent)?
quality fastx fastq rna-seq sequencing written 5.5 years ago by james.lloyd • 100 • updated 5.5 years ago by Gary • 480
7
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3
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5.9k
views
3
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fastx toolkit problem: fastq to fasta
fastx written 5.8 years ago by biolab • 1.2k • updated 18 months ago by sara.dandreano • 0
10
votes
5
answers
15k
views
10 follow
5
answers
Trimming fastq with quality
fastq fastx rna-seq trim fastqc written 6.1 years ago by RafaelMP • 110 • updated 18 months ago by genomax ♦ 89k
2
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1
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2.3k
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1
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Fastx Quality Stats Readout Intrepretation: Columns
fastx qc written 6.5 years ago by QVINTVS_FABIVS_MAXIMVS • 2.4k • updated 6.5 years ago by Dan D ♦ 7.1k
0
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3
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2.8k
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3
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What Is The Best Way To Get Rid Of Low Quality Bases In A Sequence
trimming fastx written 6.7 years ago by kmkdesilva • 80 • updated 6.7 years ago by rob234king • 600
3
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1
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2.5k
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1
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Max Length With Fastx Tookit
length fastx written 6.8 years ago by serpalma.v • 40 • updated 6.8 years ago by Istvan Albert ♦♦ 84k
18
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1
answer
13k
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1
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Fastx Invalid Quality Score Value
fastx bash written 6.8 years ago by sckinta • 590 • updated 5.5 years ago by Biostar ♦♦ 20
14
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2
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20k
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8 follow
2
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Fastqc Over-Represented Sequences Are Adapters ?
fastx fastqc written 6.9 years ago by sckinta • 590 • updated 6.9 years ago by Rohit • 1.4k
8
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2
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12k
views
6 follow
2
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How To Install Fastx-Toolkit
fastx written 6.9 years ago by kmkdesilva • 80
1
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1
answer
2.3k
views
1
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Fastx Quality Filter
fastq fastx written 6.9 years ago by freddy • 40 • updated 6.7 years ago by moorem • 230
2
votes
3
answers
5.7k
views
5 follow
3
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Fastx Barcode Splitter
barcode fastq fastx written 6.9 years ago by freddy • 40 • updated 19 months ago by athira112athira • 10
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