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<prev • 47 results • page 1 of 2 • next >
3
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2
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137
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2
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FASTX Trimming First and Last X Bases
fastq fastx trimming written 10 weeks ago by gtasource • 30 • updated 10 weeks ago by genomax ♦ 75k
3
votes
0
answers
246
views
0
answers
fastx_reverse_complement truncating files?
reverse compliment fastx rna-seq written 9 months ago by miyagi • 0 • updated 9 months ago by ATpoint ♦ 26k
0
votes
1
answer
344
views
1
answer
Fastx quality filtering error
software error fastx written 10 months ago by athira112athira • 0 • updated 10 months ago by finswimmer ♦ 13k
0
votes
0
answers
664
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0
answers
Filtering Read Quality - Cant remove all reads that have a single base below a threshold
filter fastx quality-score sequencing written 12 months ago by tbb21 • 10 • updated 9 months ago by Biostar ♦♦ 20
4
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2
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651
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2
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convert paired fastq files to fasta with EMBOSS:seqret or FASTX-toolkit:fastq_to_fasta
fasta fastq fastx emboss conversion written 12 months ago by marongiu.luigi • 420 • updated 12 months ago by finswimmer ♦ 13k
2
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1
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494
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5 follow
1
answer
FastX toolkit - problems with Collapser
collapser fastx rna-seq written 17 months ago by jcarlosariute • 0
3
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1
answer
1.7k
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1
answer
fastq_quality_trimmer: Premature End-Of-File
fastx fastq_quality_trimmer written 2.5 years ago by blur • 110 • updated 2.5 years ago by Charles Plessy • 2.7k
6
votes
2
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2.6k
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6 follow
2
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RESOLVED: libgtextutils make error : FASTX toolkit
ngs fastx 16s rrna genomics rna-seq written 2.7 years ago by prathyushakonda • 20 • updated 2.7 years ago by Charles Plessy • 2.7k
2
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1
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1.3k
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1
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Fastx_reverse_complement error. Invalid quality score even with -Q33
fastq fastx reverse-complement written 2.9 years ago by roblogan6 • 30
4
votes
1
answer
2.1k
views
5 follow
1
answer
Fastx_toolkit with nanopore data
fasta fastq fastx nanopore written 2.9 years ago by glgowers • 10 • updated 2.9 years ago by Botond Sipos • 1.7k
2
votes
1
answer
1.2k
views
1
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PE reads uneven after cutadapt
fastx bowtie written 3.1 years ago by blur • 110 • updated 3.1 years ago by dariober ♦ 10k
0
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0
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1.2k
views
0
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FASTX error - quality score
fastx written 3.2 years ago by blur • 110
0
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0
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2.2k
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0
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bowtie "Saw ASCII character -54 but expected 33-based Phred qual." after -Q 33 fastx reverse complement
fastx rna-seq bowtie written 3.3 years ago by gufernandez10 • 10
0
votes
1
answer
2.2k
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1
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Help needed using FastX toolkit: Segmentation fault
fastx quality-control written 4.0 years ago by Angelo Victoria • 30 • updated 4.0 years ago by p.papathanos • 0
0
votes
0
answers
852
views
0
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fastx issue with reverse_complement , change in overepresented sequences
fastq fastx rna-seq written 4.2 years ago by gufernandez10 • 10
1
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1
answer
1.9k
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1
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Fastx toolkits: fastq_quality_filter does not discart any read
toolkit fastx quality_filter discart written 4.2 years ago by DVR • 20 • updated 4.0 years ago by zorbax • 30
2
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1
answer
1.9k
views
1
answer
Fastx toolkits: Problems with fastq_quality_boxplot_graph.sh
boxplot fastx written 4.2 years ago by DVR • 20
2
votes
1
answer
1.2k
views
1
answer
Q33 in fastx_clipper
fastx q33 rna-seq written 4.5 years ago by EVR • 570 • updated 3.4 years ago by Biostar ♦♦ 20
3
votes
2
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3.8k
views
2
answers
Filtering sanger_fastq, illumina_fastq files using Fastx-Toolkit
illumina fastq fastx filtering written 4.7 years ago by bioinfo • 740
0
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2
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1.5k
views
2
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How many poor quality bases define a bad read (using fastx or equivalent)?
quality fastx fastq rna-seq sequencing written 4.7 years ago by james.lloyd • 90 • updated 4.7 years ago by Gary • 470
7
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3
answers
5.3k
views
3
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fastx toolkit problem: fastq to fasta
fastx written 5.1 years ago by biolab • 1.1k • updated 8 months ago by sara.dandreano • 0
10
votes
5
answers
13k
views
10 follow
5
answers
Trimming fastq with quality
fastq fastx rna-seq trim fastqc written 5.3 years ago by RafaelMP • 110 • updated 9 months ago by genomax ♦ 75k
2
votes
1
answer
2.2k
views
1
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Fastx Quality Stats Readout Intrepretation: Columns
fastx qc written 5.7 years ago by QVINTVS_FABIVS_MAXIMVS • 2.3k • updated 5.7 years ago by Dan D ♦ 7.0k
0
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3
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2.4k
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3
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What Is The Best Way To Get Rid Of Low Quality Bases In A Sequence
trimming fastx written 5.9 years ago by kmkdesilva • 80 • updated 5.9 years ago by rob234king • 580
3
votes
1
answer
2.2k
views
1
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Max Length With Fastx Tookit
length fastx written 6.1 years ago by serpalma.v • 20 • updated 6.1 years ago by Istvan Albert ♦♦ 81k
18
votes
1
answer
12k
views
1
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Fastx Invalid Quality Score Value
fastx bash written 6.1 years ago by sckinta • 550 • updated 4.7 years ago by Biostar ♦♦ 20
14
votes
2
answers
18k
views
8 follow
2
answers
Fastqc Over-Represented Sequences Are Adapters ?
fastx fastqc written 6.1 years ago by sckinta • 550 • updated 6.1 years ago by Rohit • 1.4k
8
votes
2
answers
11k
views
6 follow
2
answers
How To Install Fastx-Toolkit
fastx written 6.1 years ago by kmkdesilva • 80
1
vote
1
answer
2.2k
views
1
answer
Fastx Quality Filter
fastq fastx written 6.1 years ago by freddy • 40 • updated 5.9 years ago by moorem • 220
2
votes
3
answers
5.2k
views
5 follow
3
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Fastx Barcode Splitter
barcode fastq fastx written 6.2 years ago by freddy • 40 • updated 10 months ago by athira112athira • 0
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