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How does featurecounts deal with the output from Bowtie?
featurecounts rna-seq bowtie written 8 weeks ago by wangdp123250 • updated 8 weeks ago by swbarnes29.2k
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Full GTF file vs Subset GTF file
ensembl featurecounts mirna-seq rna-seq written 4 months ago by Arindam Ghosh330 • updated 4 months ago by Shalu Jhanwar470
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Correlate ChIP-seq to gene expression
chip-seq featurecounts correlation counts rna-seq written 4 months ago by science_lizard0 • updated 4 months ago by rohitsatyam102200
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featureCounts strand specify parameter
featurecounts count matrix strand-specify rna-seq written 6 months ago by ek6990 • updated 5 months ago by Biostar ♦♦ 20
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After read mapping, count exons or genes?
genome featurecounts rna-seq written 6 months ago by tianshenbio70 • updated 6 months ago by ATpoint41k
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Genome with many duplicated genes: allow multimapping in featurecounts?
next-gen featurecounts written 6 months ago by Tatiana0 • updated 6 months ago by swbarnes29.2k
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featureCounts with pseudobam
featurecounts salmon rna-seq pseudobam kallisto written 3.9 years ago by mccormack50 • updated 7 months ago by ATpoint41k
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featureCount not processing reads
featurecounts rsubread rna-seq written 6.0 years ago by amoltej90 • updated 9 months ago by Tom530
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