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Fimo and PSSM
fimo pssm written 7 months ago by Igor Lalin0
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FIMO score calculation
fimo pwm written 2.6 years ago by bharata1803470 • updated 14 months ago by caokai0010
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FIMO parameter for PWM motif scanning
fimo pwm written 20 months ago by bharata1803470
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FIMO vs AME - true positive and false positives across search tools
ame fimo meme motif written 2.0 years ago by rbronste360 • updated 24 months ago by Biostar ♦♦ 20
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FIMO target coordinates in fasta file
fasta fimo meme motif written 2.7 years ago by rbronste360 • updated 2.3 years ago by ATpoint38k
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Fimo output for classes of TFs from specific database
fimo meme chip-seq written 2.4 years ago by rbronste360 • updated 2.4 years ago by Alex Reynolds30k
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Extracting the exact motif location from FIMO
fimo meme motif chip-seq written 2.4 years ago by rbronste360 • updated 2.4 years ago by h.mon31k
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FIMO output to bed
bedtools fimo meme bedops written 2.7 years ago by rbronste360 • updated 2.7 years ago by YaGalbi1.5k
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FIMO outputs only Chr1 hits
fimo meme motif written 2.7 years ago by rbronste360 • updated 2.7 years ago by Satyajeet Khare1.5k
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De-novo motif discovery and repeats
de novo fimo meme motif written 2.7 years ago by rbronste360 • updated 2.7 years ago by Alex Reynolds30k
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Interpret fimo results in negative strand
fimo transcription factors motifs written 3.2 years ago by anshupa.vssut50 • updated 3.2 years ago by genomax89k
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Background letter frequencies
fimo meme motif written 3.3 years ago by sangram_keshari230
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meme-suite: How does FIMO works?
meme-suite motif identification fimo written 3.5 years ago by RT350 • updated 3.4 years ago by Santosh Anand5.1k
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FIMO GFF output to standard BED
fimo chip-seq motif sequencing written 3.6 years ago by rbronste360 • updated 3.6 years ago by Alex Reynolds30k
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meme text format
fimo meme text format written 6.3 years ago by Assa Yeroslaviz1.4k • updated 6.3 years ago by dariober11k
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Anyone used FIMO from MEME before?
fimo meme jaspar written 6.3 years ago by Mamta450 • updated 6.3 years ago by Alex Reynolds30k
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