Limit : this year
all time today this week this month this year
1,000 results • Page 1 of 20
Sort: Rank
Rank Views Votes Replies
3
votes
3
replies
361
views
Forum: Importance of Data Structures for Bioinformatics?
data-structures
updated 6 days ago by 40k • written 6 days ago by • 0
19
votes
14
replies
898
views
Forum: What is the amount of sequencing data produced annually?
data research sequencing
updated 7 days ago by 21k • written 8 days ago by ▴ 70
19
votes
10
replies
875
views
Forum: Pain points using commercial clouds
gpt tinybio
updated 12 days ago by ▴ 70 • written 28 days ago by ▴ 720
9
votes
6
replies
1.3k
views
6 follow
Forum: GTF files from Ensembl Releases 105 and 106 unsorted
Ensembl bug GTF
updated 14 days ago by 77k • written 10 months ago by ▴ 30
3
votes
2
replies
296
views
Forum: How to contribute to the next edition of Biostars Handbook
handbook
updated 20 days ago by 40k • written 20 days ago by ▴ 20
3
votes
6
replies
717
views
6 follow
Forum: Is Bioinformatics a Professional Degree?
career degree
28 days ago by anasjamshed ▴ 120
2
votes
5
replies
554
views
6 follow
Forum: Biostar as a next generation version
app mobile Biostar software tools
updated 28 days ago by 77k • written 29 days ago by • 0
2
votes
9
replies
667
views
Forum: open source projects looking for contributors
open-source
updated 15 days ago by ▴ 70 • written 29 days ago by ▴ 20
0
votes
0
replies
267
views
Forum: Recruiters: what do you expect on a junior bioinformatician?
career skills
updated 5 weeks ago by 40k • written 5 weeks ago by ▴ 20
3
votes
4
replies
473
views
Forum: Discussion: Uploading terabytes of data to NCBI SRA
NCBI WGS archiving servers remote
updated 4 weeks ago by 134k • written 5 weeks ago by ▴ 130
0
votes
0
replies
223
views
Forum: I have a Master's and little experience in Bioinformatics - what would be the next best step?
career
updated 5 weeks ago by 40k • written 5 weeks ago by ▴ 10
1
vote
3
replies
428
views
Forum: Spaceranger missing spatial coordinates [Discussion]
Visium
updated 5 weeks ago by 134k • written 6 weeks ago by ▴ 550
11
votes
8
replies
767
views
6 follow
Forum: How to write a review article in bioinformatics
article review
updated 27 days ago by 40k • written 7 weeks ago by ▴ 10
361
votes
58
replies
64k
views
44 follow
Forum: Recommend Your Favorite Bioinformatics Books
books education
written 13.6 years ago by 98k
1
vote
2
replies
4.9k
views
Forum: Would you rather analyze a dataset with a strong, non-collinear batch effect, or a weak, collinear batch effect.
collinear latent batch-effect variable GLM
9 weeks ago by LauferVA 3.7k
0
votes
3
replies
3.6k
views
10 follow
Forum: Discussion question: Cutoff for SNP phylogeny
Phylogenetics SNP
written 10 months ago by ▴ 110
2
votes
3
replies
464
views
Forum: Purely analytic or in silico manuscripts that have significantly improved biological understanding
dry-lab
updated 11 weeks ago by 134k • written 11 weeks ago by 3.7k
0
votes
2
replies
619
views
Forum: [Detailed Question] How to Normalize of Metagenomics Gene Abundances (with HMMs models)
normalization
updated 3 months ago by 10k • written 3 months ago by • 0
33
votes
23
replies
3.0k
views
8 follow
Forum: Is there a file format better suited for the era of pangenomics than the .vcf? What are its attributes?
VCF file-format genomics
updated 3 months ago by 21k • written 3 months ago by 3.7k
7
votes
8
replies
1.0k
views
Forum: Would solving many Rosalind problems show your ability for this field in job-wise?
rosalind career
3 months ago by K • 0
2
votes
3
replies
528
views
Forum: Mapping a predicted sequence to a genome
predicted map alignment sequence
updated 3 months ago by ★ 25k • written 3 months ago by • 0
0
votes
0
replies
232
views
Forum: Recommendation sought for differential exon usage of a single gene
splicing differential-exon-usage
updated 3 months ago by 40k • written 3 months ago by ▴ 10
7
votes
4
replies
740
views
Forum: [Meta] Use of AI
AI Artificial-Intelligence meta ChatGPT
updated 3 months ago by 40k • written 3 months ago by 3.7k
2
votes
2
replies
329
views
Forum: Colleges
Colleges india universities
updated 3 months ago by 40k • written 3 months ago by • 0
19
votes
15
replies
1.5k
views
6 follow
Forum: Cross out line in Biostars
meta
updated 4 months ago by 40k • written 5.4 years ago by 5.3k
120
votes
33
replies
37k
views
24 follow
Forum: Where To Look For Quality Bioinformatics Short Courses And Workshops?
Courses
updated 4 months ago by ★ 2.4k • written 10.1 years ago by 11k
100
votes
38
replies
29k
views
34 follow
Forum: List of cloud genomics companies
cloud-genomics
updated 28 days ago by 21k • written 9.9 years ago by ★ 3.6k
26
votes
12
replies
7.1k
views
6 follow
Forum: Mapping God Found ‘Scientifically Dishonest’ By Anonymous Peer Reviewers
ngs
updated 4 months ago by ▴ 10 • written 9.9 years ago by ▴ 50
170
votes
43
replies
17k
views
25 follow
Forum: Crac: Funny And/Or Weird Names For Bioinformatics Tools
humor
updated 5 months ago by 11k • written 10.5 years ago by 98k
0
votes
2
replies
493
views
Forum: How to start in bioinformatics?
career
updated 4 months ago by 40k • written 5 months ago by • 0
3
votes
4
replies
869
views
Forum: I'm looking for a mentor in Bioinformatics
mentor teaching
5 months ago by cwaingartentrabajo • 0
12
votes
5
replies
1.2k
views
6 follow
Forum: Bioinformatics opportunities in Europe?
career
updated 5 months ago by ▴ 30 • written 5 months ago by • 0
18
votes
14
replies
1.4k
views
7 follow
Forum: What's the general view on point & click bioinformatics for routine analyses?
ngs RNA-Seq next-gen-sequencing
5 months ago by Simon ▴ 40
0
votes
0
replies
6.8k
views
Forum: Optimal approach for variant calling with 3 diluted germline sample in one sequencing - Capture Sequencing
germline Calling Variant Capture Sequencing
5 months ago by Alexandre Eeckhoutte • 0
11
votes
11
replies
1.2k
views
7 follow
Forum: Any tips in landing a bioinformatic job?
Spain R
updated 5 months ago by 3.7k • written 6 months ago by ▴ 30
4
votes
2
replies
454
views
Forum: advice on course selection for a bioinformatics career.
career
updated 6 months ago by 98k • written 6 months ago by • 0
0
votes
1
reply
350
views
Forum: Graduate in molecular biology and genetics
biology genetics Molecular
updated 6 months ago by 134k • written 6 months ago by • 0
4
votes
1
reply
502
views
Forum: Open problems in genomics 2023
genomics pangenomics
updated 6 months ago by 134k • written 6 months ago by 5.5k
5
votes
3
replies
628
views
Forum: Someone posted the same question to StackOverflow and Biostars. The results will blow your mind.
meta
updated 6 months ago by 21k • written 6 months ago by ▴ 70
18
votes
10
replies
1.6k
views
Forum: Rust bioinformatics projects ideas
projects scRNA-seq RNA-seq Rust
6 months ago by bompipi95 ▴ 130
1
vote
0
replies
300
views
Forum: Penetrance versus heritability
penetrance heritability
6 months ago by tacrolimus ▴ 140
10
votes
15
replies
1.4k
views
Forum: How should reference genome fasta files be distributed by UCSC?
reference-genome fasta freeze ucsc-genome-browser
updated 3 months ago by 21k • written 7 months ago by ★ 1.6k
8
votes
4
replies
654
views
Forum: Implementing FAIR data principles to a bioinformatics lab
data
updated 7 months ago by 21k • written 7 months ago by ★ 1.5k
0
votes
0
replies
314
views
Forum: NGSrich - hg38
Coverage NGSrich
7 months ago by RK • 0
5
votes
5
replies
986
views
Forum: Bioinformatics - how to start?
molecular-biology
updated 7 months ago by ★ 25k • written 7 months ago by • 0
8
votes
8
replies
1.4k
views
7 follow
Forum: A Computer Scientist who wants to start Bioinformatics
computer-science books resources ngs
updated 8 months ago by ▴ 10 • written 9 months ago by • 0
7
votes
3
replies
824
views
Forum: Find a research paper for reproducing the results
research paper
updated 8 months ago by 134k • written 8 months ago by ★ 2.5k
1
vote
1
reply
583
views
Forum: Gene ontology vs Gene set enrichment
set enrichment GSEA ontology Gene analysis gene
updated 9 months ago by ★ 3.3k • written 9 months ago by • 0
6
votes
12
replies
1.4k
views
Forum: How to decide when to have local hardware vs cloud computing?
hardware computational-resources cloud
9 months ago by Lluís R. ★ 1.2k
15
votes
11
replies
2.3k
views
7 follow
Forum: BioStars and ChatGPT
ChatGPT Meta GPT
updated 5 months ago by ▴ 590 • written 9 months ago by ▴ 350
1,000 results • Page 1 of 20
Recent Votes
Answer: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore
Answer: Number of accessible regions included by DESeq2 to generate the PCA plot with th
Updated List of Unix tutorials 2023
Suggested tool or algorithm for accessing pathogenicity and prioritization of somatic INDELs in cancer research
Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM
Comment: ncbi error report log for validate fastq issue
Recent Locations • All
United States, just now
Cambridge, MA, just now
United States, 6 minutes ago
United States, 8 minutes ago
United States, 8 minutes ago
South Korea, 9 minutes ago
Australia, 9 minutes ago
Recent Awards • All
Autobiographer to Yogi ▴ 40
Popular Question to svlachavas ▴ 780
Popular Question to benformatics 3.7k
Scholar to i.sudbery 17k
Commentator to Istvan Albert 98k
Popular Question to windsur ▴ 20
Great Question to dukecomeback ▴ 40
Recent Replies
Comment: Network analysis with cytoscape by Yogi ▴ 40
A few questions. 1. What does the network represent? 2. Can you insert a high level picture of the network (or pictures) if you want to zo…
Answer: Chip-Seq and correlation of bam file by jared.andrews07 ★ 15k
Use [deepTools' plotCorrelation function](https://deeptools.readthedocs.io/en/develop/content/tools/plotCorrelation.html).
Answer: Transcription factor co-localization p-values by jared.andrews07 ★ 15k
[regioneR](https://bioconductor.org/packages/release/bioc/html/regioneR.html) seems to be what you want.
Comment: Complex multifactorial DE analysis with limma/edgeR based on rnaseq data by LChart 3.4k
> Our major biological questions are: to have a general comparison of cancer vs normal “treatment” conditions; In addition if doable, to co…
Comment: Which function is best for pathway analysis? by Chris ▴ 180
Thanks @luffy! Great material but seem they didn't mention how to customize the background genes depend on our data.
Comment: CollectRnaSeqMetrics (Picard) output to convert FeatureCounts into TPM by camillab. ▴ 140
I have calculate from this [tutorial][1]. so basically it retrieve the normalized counts matrix using `Deseq2` . Do you think it is correct…
Comment: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore by GenoMax 134k
`dorado` can't demultiplex data as yet (v.0.3.4). Also no adapter trimming. So something to keep in mind if you are switching. To address …
Comment: Frustrated with DEA results by dsull ★ 4.7k
Let the data speak. If there's no difference, then there's no difference. Human clinical data is always messy and unpredictable, especiall…
Comment: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore by Ram 40k
I don't think they bought the Mac Studio just for the MiniON. If they did, that might be overkill. All things considered, I'd prefer an App…
Comment: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore by ATpoint 77k
Wondering why investing all that money for such an overpriced piece of hardware. You could get an equivalent Windows or Linux workstation f…
Answer: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore by Christopher ▴ 10
I'm using a Mac Studio with M1 Ultra chip to sequence with a MinION Mk1B now and it's working great! Fast basecalling and adaptive sequenci…
Comment: ncbi error report log for validate fastq issue by GenoMax 134k
You may want to use `--split-files` instead. With your `--split-spot` option looks like you end up with interleaved data files. Unless you …
Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor by Ram 40k
Nope, I kinda gave up. I got to the image on what fragment size is (https://www.biostars.org/p/106291/#106344) but cannot figure out how to…
Comment: ncbi error report log for validate fastq issue by 1769mkc ★ 1.1k
I got it working after i updated the sra lite option while using vdb-config -i the output is what i see like this docker run -t -…
Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor by camillab. ▴ 140
yeah but I am sure you know how to do it, whereas I am just go more confused :/
Traffic: 1098 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6