Limit : all time
all time today this week this month this year
1,000 results • Page 2 of 20
Sort: Rank
Rank Views Votes Replies
18
votes
10
replies
1.8k
views
7 follow
Forum: Add artificial intelligence training related disclaimers to your profile
licensing AI
updated 9 months ago by 53k • written 9 months ago by 98k
7
votes
2
replies
642
views
Forum: Improvement of Wikipedia articles with bioinformatic subjects
Wikipedia Bioinformatics
8 months ago by Matthias Zepper 4.1k
5
votes
4
replies
964
views
Forum: Best BAM viewer in 2022
sam bam
updated 3 months ago by 40k • written 10 months ago by ▴ 70
1.2k
votes
206
replies
52k
views
108 follow
Forum: What Are The Most Common Stupid Mistakes In Bioinformatics?
software
updated 3 months ago by ★ 1.2k • written 12.5 years ago by 21k
10
votes
13
replies
2.5k
views
8 follow
Forum: Does a PhD or work experience set you up better to do bioinformatics work in industry?
advice industry phd
updated 10 months ago by 6.1k • written 10 months ago by ▴ 10
0
votes
2
replies
755
views
Forum: Best Phd Programs in Usa ( Computational Biology)
computational-biology drug-design
updated 9 months ago by 40k • written 12 months ago by • 0
4
votes
5
replies
956
views
6 follow
Forum: Which Bioinformatics Master's degree is better?
career masters
updated 4 months ago by 40k • written 11 months ago by • 0
2
votes
1
reply
658
views
Forum: Package is not available (for R version XXX)？ Manually download and install R packages
installation package R
updated 8 months ago by 5.5k • written 11 months ago by ▴ 30
3
votes
6
replies
810
views
Forum: How to become a moderator and other ways of contributing to Biostars
meta biostars
updated 4 months ago by 40k • written 11 months ago by 6.1k
2
votes
3
replies
721
views
Forum: Experiences with different cloud computing resources / providers
cloud pipeline rna-seq alignment
updated 12 months ago by 21k • written 12 months ago by ▴ 10
19
votes
13
replies
2.0k
views
8 follow
Forum: Can bioinformatics Phds be completely or almost completely done remotely?
PhD
updated 12 months ago by 6.2k • written 12 months ago by ▴ 40
8
votes
13
replies
2.0k
views
8 follow
Forum: Commercial software for genomics / NGS / bioinformatics
NGS software genomics
updated 12 months ago by • 0 • written 12 months ago by ★ 1.2k
4
votes
4
replies
1.1k
views
Forum: Bioinformatics analogies
Bioinformatics
updated 12 months ago by 98k • written 12 months ago by ▴ 40
2
votes
4
replies
967
views
Forum: Is low N in-vivo research a blind spot for RNA-seq?
statistics metascience power sample-size
updated 6 months ago by 40k • written 13 months ago by ▴ 210
2
votes
4
replies
771
views
Forum: strand specific data
strand DNA RNA specific coding
13 months ago by upasana • 0
3
votes
0
replies
574
views
Forum: Let's build a list of Drug Databases including Tyrosine Kinase Inhibitors: Update 1
pharmacology RTK IC50 TKI database
13 months ago by LauferVA 3.7k
7
votes
14
replies
2.0k
views
7 follow
Forum: Why isn't GWAS used in oncology?
gwas association oncology studies somatic cancer
updated 13 months ago by 3.4k • written 13 months ago by ▴ 80
4
votes
4
replies
1.2k
views
Forum: Cloud Computing Services available?
resources Cloud-Computing
updated 9 months ago by 40k • written 15 months ago by ★ 2.3k
2
votes
7
replies
1.1k
views
Forum: Build a Visual Analytic App for Rna-seq data [Ideas Accepted]
R plot rna-seq count
updated 14 months ago by 40k • written 14 months ago by ▴ 20
6
votes
3
replies
1.5k
views
Forum: Best formats for storing large amounts of data for random access
file-formats databases
updated 14 months ago by 4.1k • written 14 months ago by 17k
0
votes
1
reply
483
views
Forum: Add an intercept column to a bed file
plink intercept bed
updated 14 months ago by 77k • written 14 months ago by • 0
4
votes
2
replies
1.7k
views
Forum: Best resource for getting a person with a Math/Comp Sci background the right amount of Biology knowledge
biology teaching
updated 9 months ago by 40k • written 14 months ago by 3.7k
0
votes
0
replies
555
views
Forum: Normalization of ChIP-seq _ Spikein normalization + RPGC
ChIP-seq normalization RPGC Spikein Normalization
14 months ago by goddy93 • 0
3
votes
1
reply
547
views
Forum: Would an automated NGS analytics platform help research?
ngs data-analysis
updated 14 months ago by 40k • written 14 months ago by • 0
5
votes
2
replies
1.1k
views
Forum: Skills for industry career in bioinformatics
industry
updated 14 months ago by 12k • written 14 months ago by ▴ 10
9
votes
6
replies
1.0k
views
Forum: Programming languages in industry
programming language
updated 14 months ago by 9.7k • written 14 months ago by ▴ 30
2
votes
6
replies
1.0k
views
Forum: Getting the best of RNA-Seq
RNA-Seq isoform gene expression
15 months ago by Antonio R. Franco ★ 5.1k
1
vote
0
replies
563
views
Forum: Not all Over Representation Analyses are the same!
clusterProfiler Analysis fisher hypergeometric ORA Pathway
15 months ago by Francesco ▴ 20
3
votes
2
replies
671
views
Forum: From protein-protein interaction networks to..
workflow computational knowledge limitations
updated 3 months ago by 40k • written 15 months ago by ▴ 50
0
votes
0
replies
552
views
Forum: Best practices for merging vcfs with different positions + different samples?
vcf bcftools genotypes
updated 9 months ago by 40k • written 15 months ago by ▴ 30
24
votes
6
replies
4.6k
views
6 follow
Forum: Awk in Bioinformatics
perl awk shell
updated 10 months ago by 40k • written 5.1 years ago by ★ 9.3k
7
votes
8
replies
1.3k
views
Forum: Can we lock posts related to merging vcf files?
vcf
updated 10 months ago by 40k • written 16 months ago by 2.8k
0
votes
0
replies
502
views
Forum: Bioinformatics for understanding cancer and other diseases
cancer omics
updated 9 months ago by 40k • written 16 months ago by ★ 1.5k
1
vote
3
replies
1.9k
views
Forum: What counts as a valid biological replicate in single cell RNAseq?
statistics biological replicates scRNA-seq
updated 16 months ago by 3.7k • written 16 months ago by • 0
3
votes
3
replies
719
views
Forum: Looking for a PostDoc position in ML-heavy medical bioinformatics in Germany
Germany PostDoc
updated 16 months ago by 26k • written 16 months ago by ★ 2.9k
0
votes
0
replies
234
views
Forum: Can Bioinformatics be used in developing a product?
product company business
updated 9 months ago by 40k • written 16 months ago by ▴ 10
0
votes
2
replies
930
views
Forum: Bioinformatics algorithm tutorials in C++/C
protein gene genome
updated 16 months ago by 53k • written 16 months ago by ▴ 970
34
votes
11
replies
8.6k
views
13 follow
Forum: Gallery: Computational tools for DNA methylation
computational-tools methylation
updated 13 months ago by 40k • written 7.9 years ago by ★ 9.3k
6
votes
8
replies
2.2k
views
Forum: PC build for Nanopore data analysis
python PC pipeline nanopore-sequencing
16 months ago by stan.aanhane ▴ 30
7
votes
6
replies
1.3k
views
Forum: How to learn bioinformatics?
learning
updated 9 months ago by 40k • written 16 months ago by ▴ 10
2
votes
3
replies
674
views
Forum: What is difference between Bioinformatics and Data Science?
Data-Science
updated 9 months ago by 40k • written 16 months ago by ▴ 30
2
votes
2
replies
795
views
Forum: Project ideas
project-ideas
updated 16 months ago by 53k • written 16 months ago by • 0
0
votes
0
replies
450
views
Forum: Beagle5 imputation accuracy
beagle5 DR2 imputation impute2 impute-info
16 months ago by ch333 • 0
1
vote
6
replies
847
views
Forum: Bioinformatics Software Developer job interview steps and what to expect?
interview software-development
updated 15 months ago by 40k • written 17 months ago by • 0
2
votes
2
replies
622
views
Forum: What sequencing method is the most efficient for identifying genes driving rare diseases?
NGS GWAS WGS
updated 9 months ago by 40k • written 17 months ago by • 0
5
votes
5
replies
876
views
Forum: Best book introducing R programming?
coding R
17 months ago by Scottie ▴ 10
4
votes
6
replies
1.2k
views
Forum: How relevant are read numbers in FastQ headers for paired reads?
header fastq number read
17 months ago by Matthias Zepper 4.1k
0
votes
0
replies
525
views
Forum: commonly-used bioinformatics pipeline
Galaxy
updated 9 months ago by 40k • written 17 months ago by ▴ 120
0
votes
0
replies
459
views
Forum: Master's topic in Bioinformatics
Bio-informatique
17 months ago by Badji Oumar • 0
13
votes
15
replies
3.0k
views
8 follow
Forum: Biostar under spam attack - restrictions added to post content and title
meta biostars
updated 7 months ago by 40k • written 8.2 years ago by 98k
1,000 results • Page 2 of 20
Recent Votes
Comment: Low Alignment rate
Comment: ncbi error report log for validate fastq issue
GEO data mining (IB) - Downloading Sequence Read Archive (SRA) raw data
Answer: Fetch Fastq files directly for SRA data
Answer: Running Rockhopper from a command-line
Comment: Hisat2 index and alignment question
Comment: How the first sequencing template removed in pair end sequencing
Recent Locations • All
United Kingdom, just now
India, 2 minutes ago
France, 3 minutes ago
Istanbul, Turkey, 4 minutes ago
Iran, 7 minutes ago
United States, 7 minutes ago
Belgium, 9 minutes ago
Recent Awards • All
Scholar to Radu Tanasa ▴ 60
Voter to rfran010 ▴ 810
Popular Question to bharata1803 ▴ 550
Teacher to GenoMax 134k
Scholar to Mensur Dlakic ★ 25k
Teacher to LChart 3.4k
Popular Question to morovatunc ▴ 550
Recent Replies
Comment: Help writing code for a question on my homework by Joe 21k
This isn't really the right place for this question. Please ask this as a separate new question, but only if it is bioinformatics related.
Comment: How to determine the total count for each gene in lymphotype B by dalibenam64 • 0
thank you very much for your response I'm really grateful !! but I'm still confused because for example for patients I have 2 replicates…
Comment: Sequence quality drops in the 3' end of the left sequence in paired end. What co by eggrandio ▴ 40
But shouldn't quality drop at both 3'ends and not just on the left one?
Comment: Sequence quality drops in the 3' end of the left sequence in paired end. What co by ATpoint 77k
https://www.biostars.org/p/91624/
Comment: to annotate BEDPE files by Lhl ▴ 760
is this what you are looking for? https://github.com/imgag/ngs-bits/blob/master/doc/tools/BedpeGeneAnnotation.md
Comment: ncbi error report log for validate fastq issue by 1769mkc ★ 1.1k
" you're forced to use it" this is sort of since I have use docker image and then pass the GSM id as list of input first to check if the th…
Comment: ncbi error report log for validate fastq issue by ATpoint 77k
I don't think this log is helpful. Can't you just get fastq download links via sra-explorer.info or the tool mentioned by @rob in his answe…
Comment: GO ENRICHMENT ANALYSIS- DESEQ by Basti ★ 1.7k
You need to show an example of your list
Comment: How the first sequencing template removed in pair end sequencing by rfran010 ▴ 810
Great! It looks like USER enzyme is used to cleave before the first read sequencing and formamidopyrimidine DNA N-glycosylase is used to cl…
Comment: module and trait correlation for WGCNA by andres.firrincieli 3.4k
Hi, First of all, you should never use DEGs for WGCNA. See @kevinblighe answer: [link][1]. > However, when it comes to module-trait analy…
Comment: identify DEGs across all conditions and per specific conditions by luffy ▴ 50
@camillab, Please look into Kevin Blighe's response in this [post][1] hope that helps. [1]: https://www.biostars.org/p/357464/
Answer: Running Rockhopper from a command-line by langziv ▴ 50
I managed to resolve the issue by passing absolute paths instead of relative ones.
Comment: Which function is best for pathway analysis? by luffy ▴ 50
@chris Please look into @Hamid Ghaedi's well documented [post][1] on ORA and GSEA, Or [this][2] documentation. Hope this helps. [1]: ht…
Comment: Bacterial Pangenome Analysis by kirankumareripogu ▴ 10
Hi @liorglic, Thank you for your prompt response. I totally agree with you that different blastp cuttoffs provide different results and…
Answer: Fetch Fastq files directly for SRA data by Rob 6.2k
What is the accession for the project? Many — though not all — of the projects present in the NCBI SRA are also hosted in the European Nuc…
Traffic: 2023 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6