Showing: freebayesreset
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Variant discrepancy between technical replicates
alignment freebayes written 5 weeks ago by kspata50 • updated 5 weeks ago by geek_y9.7k
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how to run freebayes in multi-thread
vcf multi-thread freebayes written 4 months ago by marongiu.luigi380 • updated 3 months ago by RamRS21k
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Consensus VCF file from several variant callers
vcf variant calling freebayes gatk written 6 months ago by ajuiwl30 • updated 6 months ago by Pierre Lindenbaum120k
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Using freebayes to call variants
next-gen freebayes sequencing written 6 months ago by zhou_12280 • updated 6 months ago by finswimmer11k
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SNP calling from pool sequencing with freebayes
ngs freebayes snp written 3.9 years ago by marcoabbestia0 • updated 9 months ago by Biostar ♦♦ 20
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How to know if a variant is sequencing or mapping artifact?
vcf variant freebayes written 11 months ago by kspata50 • updated 11 months ago by finswimmer11k
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Freebayes command stopped due to lack of space
snp calling freebayes forum written 12 months ago by amcheroo0 • updated 12 months ago by finswimmer11k
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Find variants supported by at least 20 reads freebayes
variant calling freebayes written 12 months ago by kspata50 • updated 12 months ago by finswimmer11k
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Getting Haplotypes from a VCF file
vcf haplotypes freebayes written 16 months ago by gkuffel2270 • updated 14 months ago by Biostar ♦♦ 20
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Variant Calls: Freebayes vs GATK
.vcf gatk freebayes written 14 months ago by oars150 • updated 14 months ago by vdauwera920
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freebayes haplotype calling (phased variants)
freebayes haplotype phase variant phased written 3.2 years ago by mark.rose30 • updated 16 months ago by gkuffel2270
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How unphased VCF is converted into ped file?
vcf ddrad phaseing freebayes ped written 16 months ago by jingjin220330 • updated 16 months ago by Kevin Blighe43k
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how to genotype given SNP alleles from NGS data using freebayes
ngs freebayes genotype written 21 months ago by J.F.Jiang750 • updated 18 months ago by ines.sanchezdonoso0
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Converting MNP to SNP
vcf freebayes snp written 19 months ago by finswimmer11k
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Freebayes to output BAM after haplotype assembly
freebayes written 23 months ago by cvniru0 • updated 22 months ago by Biostar ♦♦ 20
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calling phased variants
phase variants freebayes problem platypus written 3.2 years ago by mark.rose30 • updated 2.2 years ago by arezansoff20
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calculating genotype quality from genotype likelihood
genotype likelihood genotype quality freebayes written 2.2 years ago by Ana170 • updated 2.2 years ago by youcai50
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