Showing: freebayesreset
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How to subset bamfile based on chromosome IDs
bam freebayes subset written 7 days ago by mernster0 • updated 7 days ago by ATpoint24k
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Freebayes haplotype calling
variantcall haplotype freebayes snp written 12 weeks ago by k.itokawa0 • updated 11 weeks ago by colindaven1.8k
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Variant discrepancy between technical replicates
alignment freebayes written 5 months ago by kspata60 • updated 5 months ago by geek_y9.9k
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how to run freebayes in multi-thread
vcf multi-thread freebayes written 8 months ago by marongiu.luigi380 • updated 8 months ago by RamRS24k
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Consensus VCF file from several variant callers
vcf variant calling freebayes gatk written 10 months ago by ajuiwl30 • updated 10 months ago by Pierre Lindenbaum123k
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Using freebayes to call variants
next-gen freebayes sequencing written 10 months ago by zhou_12280 • updated 10 months ago by finswimmer12k
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SNP calling from pool sequencing with freebayes
ngs freebayes snp written 4.3 years ago by marcoabbestia0 • updated 13 months ago by Biostar ♦♦ 20
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How to know if a variant is sequencing or mapping artifact?
vcf variant freebayes written 16 months ago by kspata60 • updated 16 months ago by finswimmer12k
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Freebayes command stopped due to lack of space
snp calling freebayes forum written 16 months ago by amcheroo0 • updated 16 months ago by finswimmer12k
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Find variants supported by at least 20 reads freebayes
variant calling freebayes written 16 months ago by kspata60 • updated 16 months ago by finswimmer12k
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Getting Haplotypes from a VCF file
vcf haplotypes freebayes written 20 months ago by gkuffel2270 • updated 18 months ago by Biostar ♦♦ 20
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Variant Calls: Freebayes vs GATK
.vcf gatk freebayes written 19 months ago by oars160 • updated 18 months ago by vdauwera960
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freebayes haplotype calling (phased variants)
freebayes haplotype phase variant phased written 3.6 years ago by mark.rose30 • updated 20 months ago by gkuffel2270
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How unphased VCF is converted into ped file?
vcf ddrad phaseing freebayes ped written 20 months ago by jingjin220340 • updated 20 months ago by Kevin Blighe49k
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how to genotype given SNP alleles from NGS data using freebayes
ngs freebayes genotype written 2.1 years ago by J.F.Jiang760 • updated 22 months ago by ines.sanchezdonoso0
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Converting MNP to SNP
vcf freebayes snp written 24 months ago by finswimmer12k
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Freebayes to output BAM after haplotype assembly
freebayes written 2.3 years ago by cvniru0 • updated 2.2 years ago by Biostar ♦♦ 20
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