Showing: freebayesreset
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How to know if a variant is sequencing or mapping artifact?
vcf variant freebayes written 9 hours ago by kspata30 • updated 4 hours ago by finswimmer2.9k
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Freebayes command stopped due to lack of space
snp calling freebayes forum written 10 days ago by amcheroo0 • updated 10 days ago by finswimmer2.9k
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Find variants supported by at least 20 reads freebayes
variant calling freebayes written 10 days ago by kspata30 • updated 10 days ago by finswimmer2.9k
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Getting Haplotypes from a VCF file
vcf haplotypes freebayes written 4 months ago by gkuffel2250 • updated 11 weeks ago by Biostar ♦♦ 20
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Variant Calls: Freebayes vs GATK
.vcf gatk freebayes written 3 months ago by oars110 • updated 12 weeks ago by vdauwera770
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freebayes haplotype calling (phased variants)
freebayes haplotype phase variant phased written 2.3 years ago by mark.rose10 • updated 4 months ago by gkuffel2250
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How unphased VCF is converted into ped file?
vcf ddrad phaseing freebayes ped written 4 months ago by jingjin22030 • updated 4 months ago by Kevin Blighe22k
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Converting MNP to SNP
vcf freebayes snp written 8 months ago by finswimmer2.9k
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freebayes VCF output (FREQ header)
vcf freebayes written 8 months ago by Thomas90
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Freebayes to output BAM after haplotype assembly
freebayes written 11 months ago by cvniru0 • updated 10 months ago by Biostar ♦♦ 20
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calling phased variants
phase variants freebayes problem platypus written 2.2 years ago by mark.rose10 • updated 14 months ago by arezansoff10
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calculating genotype quality from genotype likelihood
genotype likelihood genotype quality freebayes written 15 months ago by Ana100 • updated 15 months ago by youcai40
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Detecting Variants near repeats
vcf repeats bam freebayes written 4.1 years ago by Adrian Pelin2.1k • updated 15 months ago by Macspider2.4k
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How to fix FreeBayes error "unable to find FASTA index entry"
galaxy freebayes written 15 months ago by genome210 • updated 15 months ago by shenwei3563.8k
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Freebayes tumor vs. normal inquiry
ngs tumor freebayes snp written 2.1 years ago by alons250 • updated 21 months ago by sambrightman20
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