Showing: freebayesreset
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Consensus VCF file from several variant callers
vcf variant calling freebayes gatk written 9 weeks ago by ajuiwl30 • updated 9 weeks ago by Pierre Lindenbaum116k
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Using freebayes to call variants
next-gen freebayes sequencing written 10 weeks ago by zhou_12280 • updated 10 weeks ago by finswimmer9.8k
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SNP calling from pool sequencing with freebayes
ngs freebayes snp written 3.6 years ago by marcoabbestia0 • updated 5 months ago by Biostar ♦♦ 20
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How to know if a variant is sequencing or mapping artifact?
vcf variant freebayes written 7 months ago by kspata40 • updated 7 months ago by finswimmer9.8k
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Freebayes command stopped due to lack of space
snp calling freebayes forum written 8 months ago by amcheroo0 • updated 8 months ago by finswimmer9.8k
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Find variants supported by at least 20 reads freebayes
variant calling freebayes written 8 months ago by kspata40 • updated 8 months ago by finswimmer9.8k
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Getting Haplotypes from a VCF file
vcf haplotypes freebayes written 12 months ago by gkuffel2270 • updated 10 months ago by Biostar ♦♦ 20
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Variant Calls: Freebayes vs GATK
.vcf gatk freebayes written 10 months ago by oars150 • updated 10 months ago by vdauwera890
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freebayes haplotype calling (phased variants)
freebayes haplotype phase variant phased written 2.9 years ago by mark.rose30 • updated 12 months ago by gkuffel2270
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How unphased VCF is converted into ped file?
vcf ddrad phaseing freebayes ped written 12 months ago by jingjin22030 • updated 12 months ago by Kevin Blighe37k
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how to genotype given SNP alleles from NGS data using freebayes
ngs freebayes genotype written 17 months ago by J.F.Jiang730 • updated 14 months ago by ines.sanchezdonoso0
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Converting MNP to SNP
vcf freebayes snp written 15 months ago by finswimmer9.8k
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freebayes VCF output (FREQ header)
vcf freebayes written 16 months ago by Thomas90
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Freebayes to output BAM after haplotype assembly
freebayes written 19 months ago by cvniru0 • updated 18 months ago by Biostar ♦♦ 20
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calling phased variants
phase variants freebayes problem platypus written 2.9 years ago by mark.rose30 • updated 22 months ago by arezansoff20
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calculating genotype quality from genotype likelihood
genotype likelihood genotype quality freebayes written 23 months ago by Ana130 • updated 23 months ago by youcai40
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Detecting Variants near repeats
vcf repeats bam freebayes written 4.7 years ago by Adrian Pelin2.2k • updated 23 months ago by Macspider2.7k
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How to fix FreeBayes error "unable to find FASTA index entry"
galaxy freebayes written 23 months ago by genome2110 • updated 23 months ago by shenwei3564.5k
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