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Is there a way to calculate the maximum length at which the frequencies of k-mers can be accurately estimated?
k-mer frequency written 29 days ago by Joseph Hughes • 2.7k
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vcftools counts output not written to file
vcf frequency vcftools snp counts written 5 weeks ago by spider_monkey • 10
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Hla frequencies comparison
alleles frequency comparison hla written 6 weeks ago by corallo.dmn • 0
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little discrepancies gnomAD DB vs. website
frequency genomes gnomad exomes variants written 7 weeks ago by cocchi.e89 • 20 • updated 7 weeks ago by tpoterba • 50
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How do I calculate the total read depth and allele frequency using just the target bed file and aligned bam
bed frequency allele mpileup bam written 4.0 years ago by bobrowdy123 • 0 • updated 4 months ago by Biostar ♦♦ 20
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Using VEP to get gnomAD frequencies
annotation frequency vep gnomad allele frequency written 5 months ago by brett.spurrier • 20 • updated 5 months ago by Emily_Ensembl ♦ 18k
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7 follow
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How To Bin Metagenomic Assembled Contigs Using Tetranucleotide Frequency
nucleotide metagenomics frequency written 7.0 years ago by Shuixia100 • 120 • updated 5 months ago by Biostar ♦♦ 20
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1
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Improving efficiency of a script for genotype scoring that enumerates all allele combinations
calculation loop frequency efficiency written 8 months ago by Volka • 50 • updated 7 months ago by Michael Dondrup ♦ 46k
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How to Get Nucleotide/Allele Frequency Spectrum From NGS SAM/VCF File
genome frequency next-gen snp written 19 months ago by liaoyunshi • 0 • updated 8 months ago by Biostar ♦♦ 20
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Calculating frequencies of possible combinations of SNP genotypes in a population
frequency allele genotype written 8 months ago by Volka • 50 • updated 8 months ago by Gennady Khvorykh • 90
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3
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553
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How can I calculate coverage from the base frequencies file?
frequency coverage basefrequency written 18 months ago by SaltedPork • 100 • updated 18 months ago by cpad0112 ♦ 11k
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1
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Calculate the b allele frequency from a VCF file
vcf frequency written 2.3 years ago by Maj • 0 • updated 2.3 years ago by jmzeng1314 • 90
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genotype frequency data
frequency genotype gnomad written 2.6 years ago by aidpranculis • 0 • updated 2.6 years ago by Ron • 950
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allele frequency data
inputfile frequency arlequin written 2.8 years ago by soraiiafng • 0
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Mutation frequency in cancer for a particular gene
gene frequency mutation cancer written 2.9 years ago by bzhtgb • 10
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calculating frequency of snps
frequency snps written 3.0 years ago by 12021560-040 • 60
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How can I check the distribution of genotypes and alleles in two groups using SAS?
frequency allele genotype sas written 3.0 years ago by Mahantesh Biradar • 30
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detecting SNP allele and genotype frequencies from 1000 genomes at ensembl
population frequency allele mysql genotype written 3.1 years ago by Viktor Bojovic • 0
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Genotype frequencies Plink
gwas frequency plink written 3.8 years ago by Weavile • 0 • updated 3.8 years ago by chrchang523 ♦ 5.2k
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CNV frequency database for review
frequency cnv written 4.6 years ago by J.F.Jiang • 750
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How Can I Get The Field Of Ac Key-Value Pair In The Info Column In Vcf File?
vcf calling frequency allele variant written 5.3 years ago by cli2 • 0
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Arlequin Input Frequency Data
indel frequency snp written 5.3 years ago by reis.a.rita • 0
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Up To Date Allele Frequency Data - Larger Datasets?
frequency allele written 5.3 years ago by Devonj • 90 • updated 5.3 years ago by xb • 400
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1000 Genome ,Dbsnp132 ,Hap Map Frequency For A Set Of Variant
genome hapmap frequency dbsnp written 7.9 years ago by Abdel • 150 • updated 5.4 years ago by Biostar ♦♦ 20
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7 follow
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Script To Calculate Dinucleotide Frequency For Many Sequences
perl frequency written 5.4 years ago by biolab • 1.1k • updated 5.4 years ago by Pavel Senin • 1.9k
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Mafs Do Not Match Allele En Population Diversity
maf frequency allele written 5.6 years ago by Martijn • 0 • updated 5.6 years ago by Emily_Ensembl ♦ 18k
4
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2
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2.9k
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Biopython - Extracting Nucleotide Frequency On Aligned Sequences
nucleotide bioinformatics frequency alignment biopython written 6.1 years ago by ericmajinglong • 100 • updated 6.0 years ago by Medhat ♦ 8.3k
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Snp Frequency In Cases Vs Controls
frequency association snp written 6.2 years ago by anatopf • 0
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1
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Haplotype Frequency Calculation
frequency haplotype written 6.3 years ago by AsoInfo • 220 • updated 6.3 years ago by zx8754 ♦ 7.5k
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1
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10 follow
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Computing B-Allele Frequency From Bam Or Vcf Related To Exome Samples
vcf exome frequency allele bam written 6.4 years ago by Stephwen • 140 • updated 6.4 years ago by Irsan • 6.9k
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