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Recent Replies
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C: How get read group information from fastq files in SRA by
zamani_2012 • 0
Many thanks for your comment. If I do not enter this information, will it not have a negative eff...
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ATpoint ♦ 38k
This option is not mandatory, just leave it blank. There is no formal definition of a read group,...
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yunzhe.jiang97 • 0
Hi, I am not familiar with Perl at all. Is there another way to get syntenic regions?
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C: How to download synteny form ENSEMBL by
yunzhe.jiang97 • 0
Hi, I am not familiar with Perl at all. Is there another way to get syntenic regions?
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ATpoint ♦ 38k
The tophit on google directy to your question. Please give some context and how this is related t...
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C: Is it valid to use differential gene expression analysis tool for scRNA-seq with by
tofukaj • 10
More significant genes acquired.
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C: Compare transcriptome between different species of Leishmania by
hugo.avila • 100
Ohh yeah ! Sorry my mistake. For some reason i read Listeria
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genomax ♦ 89k
As the amount of data increased it is possible that sequences added to the pool led to discovery...
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C: Difference in imputation between platforms and RS names by
anamaria • 100
Yes indeed. Unfortunately I don't have any record on what kind of MAF threshold was used prior an...
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C: Variant Calling for Organism aligned to a reference genome of not the same speci by
JC ♦ 11k
> best pipeline for variant calling under these circumstances None, you cannot distinguish b...
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C: Variant Call Format (.vcf) conversion to .bam by
Hamid Ghaedi • 220
Upvoted your answer because I supposed, @abyssaldharok has not idea about what he/she asked.
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C: Difference in imputation between platforms and RS names by
Kevin Blighe ♦ 65k
I suppose that it indicates how disagreement is on rare alleles; so, the differences could be acc...
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