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<prev • 78 results • page 1 of 3 • next >
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Fst Visulization from WGS data
R next-gen fst snp wgs written 6 days ago by jaafari.omid • 50
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Permutation of Fst statistics of genotyped data to get p value
pvalue fst plink empirical pvalue genotype written 24 days ago by charvinangia • 30
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Permutation of Fst statistics of genotyped data to get p value
pvalue fst plink empirical pvalue genotype written 24 days ago by charvinangia • 30
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92
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Post Fst calculation analysis
population structure diversity loci fst snp written 7 weeks ago by charvinangia • 30
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74
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Window-based Fst analysis
population genetic fst written 7 weeks ago by seta • 1.2k
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93
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How to begin with Fst calculation of SNPs from two different populations
populations fst snp written 8 weeks ago by charvinangia • 30
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149
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Calculate Fst between pairs of population : Tool Used?
R tools population fst snp written 3 months ago by shreyajha • 30
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135
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How to perform fst test using SNPs frequency?
fst snp written 4 months ago by Abdul Rafay Khan • 1.0k
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252
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How to set the size of window for calculating Fst?
window fst snp written 4 months ago by serpalma.v • 20
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How to detect outliers from either (a) SNP-Fst or (b) Window-Fst distributions?
fst vcftools written 5 months ago by serpalma.v • 20 • updated 5 months ago by h.mon ♦ 27k
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311
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Plotting Fst or zFst value
z-score fst manhattan plot written 6 months ago by seta • 1.2k
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707
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How vcftools calculate Fst value?
populations fst vcftools written 7 months ago by seta • 1.2k
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512
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1
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Fst calculation between my own population and 1000 genome populations
population 1000 genome fst written 8 months ago by seta • 1.2k • updated 8 months ago by cetin.m • 30
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442
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the function of readVCF in PopGenome R package
vcf R popgenome fst written 10 months ago by mike229lin • 10 • updated 9 months ago by Biostar ♦♦ 20
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calculating allele frequency difference or Fst value ?
allele frequency population fst written 10 months ago by seta • 1.2k • updated 9 months ago by paolo002 • 140
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How to calculate Hudson's Fst at Population and SNP level?
population differentiation fst snp written 4.4 years ago by bibb77 • 80 • updated 10 months ago by Mr Locuace • 90
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Which method to calculate pairwise Fst from SNP data
fst snp written 10 months ago by loisrancilhac • 0
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494
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Calculating Fst for Multiallelic variants in VCFs
vcf multiallelic fst written 12 months ago by ma17 • 0
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322
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Strange FST values
plink vcftools fst written 14 months ago by hdtms • 20
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Fst between the combination of populations (pairwise)
pairwise fst plink written 15 months ago by cmcouto.silva • 30 • updated 14 months ago by Biostar ♦♦ 20
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948
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Fst calculation with VCFtools
pooled vcftools fst written 15 months ago by Dracaena • 30
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3.1k
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Plotting Fst
fst written 5.7 years ago by thjnant • 90 • updated 15 months ago by Biostar ♦♦ 20
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Population information for Fst in StAMPP
vcf adegenet fst snp stampp written 17 months ago by aesculus • 10
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630
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Fst value inflation in BayeScan?
fst outlier bayescan fst written 17 months ago by aesculus • 10 • updated 17 months ago by Biostar ♦♦ 20
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1
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2.9k
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1
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What is population branch statistic (PBS)?
population structure natural selection fst written 19 months ago by beausoleilmo • 250 • updated 19 months ago by GabrielMontenegro • 530
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3.0k
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Detecting outlier loci from pairwise Fst values
outlier fst vcftools written 4.3 years ago by Earendil • 20 • updated 19 months ago by Shangzhe Zhang • 0
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Fst with p-values
genomewide fst pvalue written 22 months ago by Simo • 30
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Why removing SNPs with MAF<5% for Fst calculation?
maf fst snp written 23 months ago by Mr Locuace • 90 • updated 23 months ago by Kevin Blighe ♦ 48k
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502
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Fst computation utilizing epigenetic modifications like histon modifications or methylation
populatio sequencing methylation ngs fst written 2.2 years ago by baxy • 150
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Lositan using 2 populations only? Loci falling in straight line where Fst=He
fdist fst lositan heterozygosity written 3.9 years ago by lauren.c.white89 • 0 • updated 2.4 years ago by Biostar ♦♦ 20
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