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<prev • 83 results • page 1 of 3 • next >
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calculate fst for every allele in any position
fst snp written 2 days ago by mostafarafiepour • 60
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per site max fst and avg fst within windows?
fst snp written 28 days ago by mrfz003 • 0
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70
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Using BCFtools to obtain between population Fst values from vcf file
vcf bcftools fst snp weir and cockerham written 5 weeks ago by ishengomae • 100
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128
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Generating FST values from RRBS data
bisulfite sequencing rrbs snp fst written 10 weeks ago by alan.g.hudson • 0
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selection signatures using fst method
bovine snp data plink selection signatures fst written 11 weeks ago by kas • 0
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136
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Fst Visulization from WGS data
R next-gen fst snp wgs written 3 months ago by jaafari.omid • 50
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117
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Permutation of Fst statistics of genotyped data to get p value
pvalue fst plink empirical pvalue genotype written 3 months ago by doodle • 30
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146
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Permutation of Fst statistics of genotyped data to get p value
pvalue fst plink empirical pvalue genotype written 3 months ago by doodle • 30
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159
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Post Fst calculation analysis
population structure diversity loci fst snp written 4 months ago by doodle • 30
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149
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Window-based Fst analysis
population genetic fst written 4 months ago by seta • 1.2k
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169
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How to begin with Fst calculation of SNPs from two different populations
populations fst snp written 4 months ago by doodle • 30
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222
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Calculate Fst between pairs of population : Tool Used?
R tools population fst snp written 6 months ago by shreyajha • 30
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193
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How to perform fst test using SNPs frequency?
fst snp written 7 months ago by Abdul Rafay Khan • 1.1k
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369
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How to set the size of window for calculating Fst?
window fst snp written 7 months ago by serpalma.v • 20
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443
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How to detect outliers from either (a) SNP-Fst or (b) Window-Fst distributions?
fst vcftools written 8 months ago by serpalma.v • 20 • updated 8 months ago by h.mon ♦ 28k
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Plotting Fst or zFst value
z-score fst manhattan plot written 9 months ago by seta • 1.2k
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984
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How vcftools calculate Fst value?
populations fst vcftools written 10 months ago by seta • 1.2k
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608
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1
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Fst calculation between my own population and 1000 genome populations
population 1000 genome fst written 11 months ago by seta • 1.2k • updated 11 months ago by cetin.m • 30
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543
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the function of readVCF in PopGenome R package
vcf R popgenome fst written 12 months ago by mike229lin • 10 • updated 11 months ago by Biostar ♦♦ 20
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calculating allele frequency difference or Fst value ?
allele frequency population fst written 13 months ago by seta • 1.2k • updated 12 months ago by paolo002 • 150
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5
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How to calculate Hudson's Fst at Population and SNP level?
population differentiation fst snp written 4.7 years ago by bibb77 • 80 • updated 13 months ago by Mr Locuace • 90
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1.4k
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Which method to calculate pairwise Fst from SNP data
fst snp written 13 months ago by loisrancilhac • 0
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600
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Calculating Fst for Multiallelic variants in VCFs
vcf multiallelic fst written 15 months ago by ma17 • 10
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373
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Strange FST values
plink vcftools fst written 17 months ago by hdtms • 20
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1.1k
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Fst between the combination of populations (pairwise)
pairwise fst plink written 18 months ago by cmcouto.silva • 30 • updated 17 months ago by Biostar ♦♦ 20
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1.1k
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Fst calculation with VCFtools
pooled vcftools fst written 18 months ago by Dracaena • 30
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1
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3.3k
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1
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Plotting Fst
fst written 5.9 years ago by thjnant • 90 • updated 18 months ago by Biostar ♦♦ 20
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1
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1.1k
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1
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Population information for Fst in StAMPP
vcf adegenet fst snp stampp written 20 months ago by aesculus • 10
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733
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Fst value inflation in BayeScan?
fst outlier bayescan fst written 20 months ago by aesculus • 10 • updated 20 months ago by Biostar ♦♦ 20
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3.6k
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What is population branch statistic (PBS)?
population structure natural selection fst written 22 months ago by beausoleilmo • 260 • updated 22 months ago by GabrielMontenegro • 540
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