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<prev • 72 results • page 1 of 3 • next >
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Calculate Fst between pairs of population : Tool Used?
R tools population fst snp written 21 days ago by shreyajha • 20
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86
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How to perform fst test using SNPs frequency?
fst snp written 4 weeks ago by Abdul Rafay Khan • 1.0k
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135
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How to set the size of window for calculating Fst?
window fst snp written 6 weeks ago by serpalma.v • 20
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174
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How to detect outliers from either (a) SNP-Fst or (b) Window-Fst distributions?
fst vcftools written 11 weeks ago by serpalma.v • 20 • updated 11 weeks ago by h.mon ♦ 25k
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Plotting Fst or zFst value
z-score fst manhattan plot written 3 months ago by seta • 1.2k
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471
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How vcftools calculate Fst value?
populations fst vcftools written 4 months ago by seta • 1.2k
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398
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Fst calculation between my own population and 1000 genome populations
population 1000 genome fst written 5 months ago by seta • 1.2k • updated 5 months ago by cetin.m • 30
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the function of readVCF in PopGenome R package
vcf R popgenome fst written 7 months ago by mike229lin • 10 • updated 6 months ago by Biostar ♦♦ 20
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calculating allele frequency difference or Fst value ?
allele frequency population fst written 7 months ago by seta • 1.2k • updated 6 months ago by paolo002 • 140
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How to calculate Hudson's Fst at Population and SNP level?
population differentiation fst snp written 4.2 years ago by bibb77 • 60 • updated 7 months ago by Mr Locuace • 90
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Which method to calculate pairwise Fst from SNP data
fst snp written 7 months ago by loisrancilhac • 0
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409
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Calculating Fst for Multiallelic variants in VCFs
vcf multiallelic fst written 9 months ago by ma17 • 0
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274
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Strange FST values
plink vcftools fst written 11 months ago by hdtms • 20
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Fst between the combination of populations (pairwise)
pairwise fst plink written 12 months ago by cmcouto.silva • 30 • updated 11 months ago by Biostar ♦♦ 20
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Fst calculation with VCFtools
pooled vcftools fst written 12 months ago by Dracaena • 30
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Plotting Fst
fst written 5.4 years ago by thjnant • 90 • updated 12 months ago by Biostar ♦♦ 20
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Population information for Fst in StAMPP
vcf adegenet fst snp stampp written 14 months ago by aesculus • 10
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Fst value inflation in BayeScan?
fst outlier bayescan fst written 14 months ago by aesculus • 10 • updated 14 months ago by Biostar ♦♦ 20
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What is population branch statistic (PBS)?
population structure natural selection fst written 16 months ago by beausoleilmo • 230 • updated 16 months ago by GabrielMontenegro • 520
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2.9k
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Detecting outlier loci from pairwise Fst values
outlier fst vcftools written 4.0 years ago by Earendil • 20 • updated 16 months ago by Shangzhe Zhang • 0
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1.4k
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Fst with p-values
genomewide fst pvalue written 19 months ago by Simo • 30
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1
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Why removing SNPs with MAF<5% for Fst calculation?
maf fst snp written 20 months ago by Mr Locuace • 90 • updated 20 months ago by Kevin Blighe ♦ 43k
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469
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Fst computation utilizing epigenetic modifications like histon modifications or methylation
populatio sequencing methylation ngs fst written 24 months ago by baxy • 150
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914
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Lositan using 2 populations only? Loci falling in straight line where Fst=He
fdist fst lositan heterozygosity written 3.6 years ago by lauren.c.white89 • 0 • updated 2.2 years ago by Biostar ♦♦ 20
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Fst outlier test for pooled data
poolseq fst written 2.9 years ago by AP • 90
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2.2k
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VCFTools weir-fst-pop on haploid organisms
weir-fst-pop haploid vcftools fst written 5.2 years ago by kawaiilain • 10 • updated 2.2 years ago by guillaume.rbt • 590
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Multiple hypothesis testing, Fst outliers
fdr population genomics gpat pfst fst written 2.2 years ago by chrisbala10 • 10
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Using satsuma output when creating manhattan plots
satsuma manhattan plot fst written 2.3 years ago by ash.t.cook • 10
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2.0k
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1
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Fst (Weir and Cockerham estimator)
microsatellites fst populuation genetics written 2.8 years ago by outlier95 • 10
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1
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Estimating FST per genome
genome next-gen fst written 2.5 years ago by GabrielMontenegro • 520 • updated 2.5 years ago by Zev.Kronenberg ♦ 11k
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