Showing: gatbreset
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7
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4
answers
1.7k
views
4
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Tool: DiscoSnp becomes DiscoSnp++
discosnp snp tool gatb indels written 3.8 years ago by pierre.peterlongo830 • updated 2.8 years ago by acros10
4
votes
2
answers
3.4k
views
2
answers
1
vote
2
answers
1.2k
views
2
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GATB - Bloom filter for k-mers
gatb written 3.8 years ago by karel.brinda0
0
votes
2
answers
1.2k
views
2
answers
Build Graph lost k-mers
gatb written 3.7 years ago by lardo0 • updated 3.7 years ago by Brian Bushnell16k
3
votes
2
answers
1.3k
views
2
answers
Effect of Read Length?
discosnp gatb written 3.2 years ago by jfontana3170 • updated 3.2 years ago by pierre.peterlongo830
7
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2
answers
1.4k
views
2
answers
4
votes
2
answers
896
views
2
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Kmer and rev-comp in separate nodes
gatb written 3.2 years ago by Shatlyk Ashyralyyev20 • updated 3.1 years ago by edrezen700
0
votes
1
answer
1.3k
views
1
answer
Does GATB support paired reads
gatb written 4.2 years ago by cts1.6k • updated 4.2 years ago by edrezen700
15
votes
1
answer
1.6k
views
1
answer
Blog: Fast kmer reverse complement code using bit tricks
kmer reverse-complement gatb code blog written 4.2 years ago by Rayan Chikhi1.4k • updated 4.2 years ago by Rob2.8k
2
votes
1
answer
985
views
1
answer
Bloocoo failed on two input files.
gatb written 3.8 years ago by lh331k • updated 3.8 years ago by claire.lemaitre100
5
votes
1
answer
1.1k
views
1
answer
News: New version of the GATB library
news next-gen gatb minia dsk written 3.8 years ago by edrezen700 • updated 3.8 years ago by Rayan Chikhi1.4k
4
votes
1
answer
1.0k
views
1
answer
iterating nodes example 'char const*' error
gatb written 3.8 years ago by Haluk170
0
votes
1
answer
933
views
1
answer
2
votes
1
answer
927
views
1
answer
Adding read information to dBG nodes
gatb minia written 3.5 years ago by R.Fuentes10
4
votes
1
answer
960
views
1
answer
GATB download links don't work
gatb written 3.4 years ago by guillaume.gautreau44140 • updated 3.4 years ago by Rayan Chikhi1.4k
4
votes
1
answer
1.5k
views
1
answer
GATB de Bruijn graph
sequence gatb written 3.4 years ago by Rob2.8k
0
votes
1
answer
891
views
1
answer
process substitution input
dbgh5 gatb written 3.1 years ago by gmdc0 • updated 3.1 years ago by edrezen700
0
votes
1
answer
874
views
1
answer
Segmentation fault error while using GATB
gatb written 2.5 years ago by AriyurD0 • updated 2.4 years ago by Rayan Chikhi1.4k
2
votes
1
answer
660
views
1
answer
Illumina mate-pair reads with TakeABreak
gatb takeabreak written 2.4 years ago by vincenzo.bonnici0 • updated 2.4 years ago by claire.lemaitre100
2
votes
1
answer
603
views
1
answer
Getting list of connected nodes to a node
gatb written 2.1 years ago by An7ar350 • updated 2.1 years ago by edrezen700
0
votes
1
answer
635
views
1
answer
GATB Multithread always one core
gatb written 21 months ago by lys89180 • updated 20 months ago by Rayan Chikhi1.4k
0
votes
1
answer
515
views
1
answer
importing a GFA2 scaffold graph
gatb written 16 months ago by egoltsman0 • updated 12 months ago by Rayan Chikhi1.4k
0
votes
1
answer
409
views
1
answer
Inserting k-mers into existing Graph with GATB
gatb written 15 months ago by TK0 • updated 14 months ago by pierre.peterlongo830
0
votes
1
answer
472
views
1
answer
GATB-minia-pipelne fails at bloocoo step
gatb written 15 months ago by Shyam120 • updated 12 months ago by RamRS19k
2
votes
1
answer
425
views
1
answer
GATB - Multithreaded iteration of paired banks ?
multithreading gatb written 14 months ago by wfd0 • updated 12 months ago by Rayan Chikhi1.4k
1
vote
1
answer
526
views
1
answer
compiling gatb-core with external Boost and hdf5
conda bioconda packaging gatb cmake written 14 months ago by ilya_shl0 • updated 13 months ago by Rayan Chikhi1.4k
3
votes
1
answer
443
views
1
answer
GATB - create or manipulate data of Sequence
gatb written 13 months ago by wfd0 • updated 13 months ago by pierre.peterlongo830
3
votes
1
answer
297
views
1
answer
GATB - Read fasta files
gatb written 9 months ago by robi10 • updated 9 months ago by guillaume.rizk20
6
votes
1
answer
184
views
1
answer
DSK: readme and options
gatb written 5 months ago by sebastien.letort70 • updated 5 months ago by pierre.peterlongo830
3
votes
1
answer
198
views
1
answer
GATB buildNode giving errors
gatb written 4 months ago by cwright0 • updated 4 months ago by Rayan Chikhi1.4k
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