Showing: gatbreset
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compiling gatb-core with external Boost and hdf5
conda bioconda packaging gatb cmake written 23 days ago by ilya_shl0 • updated 14 days ago by Rayan Chikhi1.2k
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Inserting k-mers into existing Graph with GATB
gatb written 9 weeks ago by TK0 • updated 7 weeks ago by pierre.peterlongo600
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145
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GATB-minia-pipelne fails at bloocoo step
gatb written 8 weeks ago by Shyam80
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145
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importing a GFA2 scaffold graph
gatb written 3 months ago by egoltsman0
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GATB Multithread always one core
gatb written 8 months ago by lys89180 • updated 7 months ago by Rayan Chikhi1.2k
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Getting list of connected nodes to a node
gatb written 12 months ago by An7ar350 • updated 12 months ago by edrezen680
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News: Making efficient NGS data analysis softwares - GATB-Core Library Tutorial
news next-gen tutorial gatb tool written 12 months ago by patrick.durand110 • updated 12 months ago by genomax34k
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Tool: MindTheGap new release !
mindthegap gatb tool written 15 months ago by claire.lemaitre100
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410
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1
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Illumina mate-pair reads with TakeABreak
gatb takeabreak written 16 months ago by vincenzo.bonnici0 • updated 15 months ago by claire.lemaitre100
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519
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Segmentation fault error while using GATB
gatb written 16 months ago by AriyurD0 • updated 16 months ago by Rayan Chikhi1.2k
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Tool: DiscoSnp becomes DiscoSnp++
discosnp snp tool gatb indels written 2.7 years ago by pierre.peterlongo600 • updated 20 months ago by acros10
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LEON producing truncated output
leon fastq gatb written 22 months ago by intipedroso10
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process substitution input
dbgh5 gatb written 2.0 years ago by gmdc0 • updated 2.0 years ago by edrezen680
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Kmer and rev-comp in separate nodes
gatb written 2.1 years ago by Shatlyk Ashyralyyev20 • updated 2.1 years ago by edrezen680
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3
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Effect of Read Length?
discosnp gatb written 2.1 years ago by jfontana3170 • updated 2.1 years ago by pierre.peterlongo600
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GATB de Bruijn graph
sequence gatb written 2.3 years ago by Rob2.1k
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GATB download links don't work
gatb written 2.4 years ago by guillaume.gautreau44140 • updated 2.4 years ago by Rayan Chikhi1.2k
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663
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Adding read information to dBG nodes
gatb minia written 2.5 years ago by R.Fuentes10
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Build Graph lost k-mers
gatb written 2.6 years ago by lardo0 • updated 2.6 years ago by Brian Bushnell14k
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731
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1
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iterating nodes example 'char const*' error
gatb written 2.7 years ago by Haluk160
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News: New version of the GATB library
news next-gen gatb minia dsk written 2.7 years ago by edrezen680 • updated 2.7 years ago by Rayan Chikhi1.2k
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729
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Bloocoo failed on two input files.
gatb written 2.8 years ago by lh330k • updated 2.8 years ago by claire.lemaitre100
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