Showing: gatkreset
<prev • 627 results • page 1 of 21 • next >
1
vote
1
answer
45
views
1
answer
0
votes
0
answers
114
views
0
answers
3
votes
0
answers
198
views
0
answers
ERROR MESSAGE: QD annotation at VariantRecalibrator
gatk variantrecalibrator snp written 4 weeks ago by Satyajeet Khare1.3k • updated 4 weeks ago by Vijay Lakhujani3.5k
0
votes
0
answers
1.3k
views
0
answers
GATK DP filter for multiple samples
gatk snps written 2.4 years ago by sun.nation120 • updated 4 weeks ago by Flávia Rogério0
0
votes
1
answer
107
views
1
answer
Consensus VCF file from several variant callers
vcf variant calling freebayes gatk written 4 weeks ago by ajuiwl30 • updated 4 weeks ago by Pierre Lindenbaum116k
0
votes
0
answers
70
views
0
answers
6
votes
2
answers
152
views
2
answers
Bash vs WDL for running GATK
gatk cromwell pipeline linux wdl written 6 weeks ago by Mehulsharma.25310 • updated 5 weeks ago by vdauwera890
1
vote
1
answer
146
views
1
answer
Warning in GATK Picard MarkDuplicates
variant calling gatk picard markduplicates written 5 weeks ago by Mehulsharma.25310 • updated 5 weeks ago by Pierre Lindenbaum116k
0
votes
0
answers
138
views
0
answers
Stop GATK MergeBamAlignment from unmapping reads
gatk4 gatk alignment bam mergebamalignment written 5 weeks ago by ttmigueltt0 • updated 5 weeks ago by finswimmer8.8k
2
votes
1
answer
985
views
1
answer
GATK: -nct and -nt
gatk parallel written 21 months ago by fire_water80 • updated 5 weeks ago by nick.carleson10
3
votes
1
answer
168
views
1
answer
Issues with Marking Duplicates in Picard
gatk picard samtools sorting bwa written 6 weeks ago by sarah.kettelkamp0 • updated 6 weeks ago by goodez420
1
vote
0
answers
163
views
5 follow
0
answers
1
vote
1
answer
127
views
1
answer
1
vote
1
answer
269
views
1
answer
How can I find SNPs between two Genomes?
genome gatk snp fasta written 7 weeks ago by Zeason0 • updated 7 weeks ago by zx87546.2k
5
votes
0
answers
177
views
0
answers
How can I find Variants position by GATK and Samtools
gatk samtools snp written 10 weeks ago by Mbillah100 • updated 8 weeks ago by Biostar ♦♦ 20
0
votes
0
answers
180
views
0
answers
1
vote
0
answers
197
views
0
answers
Standard Practice of making VCF file from SAM file
gatk snp written 10 weeks ago by hafiz.talhamalik40 • updated 9 weeks ago by Biostar ♦♦ 20
2
votes
1
answer
186
views
1
answer
Difference in Haplotypecaller in GATKv4 Vs Gatk3.7
haplotypecaller gatk written 10 weeks ago by Nandini750 • updated 9 weeks ago by lffu_003230
3
votes
0
answers
134
views
0
answers
2
votes
0
answers
158
views
0
answers
0
votes
1
answer
180
views
1
answer
0
votes
2
answers
617
views
2
answers
Error : Duplicate allele added to VariantContext GATK
vcf gatk malformed variantstotable written 10 months ago by steven.blanchard920 • updated 12 weeks ago by brett0
0
votes
0
answers
140
views
0
answers
Qs about mutect2
gatk wes mutect2 written 12 weeks ago by walker10
0
votes
0
answers
226
views
0
answers
2
votes
1
answer
194
views
1
answer
1
vote
1
answer
158
views
1
answer
1
vote
0
answers
212
views
0
answers
Question about Base calling for pacbio data
genome indel pacbio snp gatk written 3 months ago by kamel0 • updated 3 months ago by Vijay Lakhujani3.5k
0
votes
0
answers
229
views
0
answers
1
vote
0
answers
388
views
0
answers
1
vote
0
answers
450
views
0
answers
Adding read group to bam files from multiplexed samples
gatk picard bam written 5 months ago by serpalma.v20 • updated 3 months ago by Biostar ♦♦ 20
<prev • 627 results • page 1 of 21 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1192 users visited in the last hour