Showing: gatkreset
<prev • 615 results • page 1 of 21 • next >
5
votes
0
answers
125
views
0
answers
How can I find Variants position by GATK and Samtools
gatk samtools snp written 17 days ago by Mbillah100 • updated 4 days ago by Biostar ♦♦ 20
0
votes
0
answers
115
views
0
answers
1
vote
0
answers
148
views
0
answers
Standard Practice of making VCF file from SAM file
gatk snp written 20 days ago by hafiz.talhamalik30 • updated 12 days ago by Biostar ♦♦ 20
2
votes
1
answer
112
views
1
answer
Difference in Haplotypecaller in GATKv4 Vs Gatk3.7
haplotypecaller gatk written 21 days ago by Nandini710 • updated 13 days ago by lffu_003230
3
votes
0
answers
92
views
0
answers
2
votes
0
answers
111
views
0
answers
0
votes
1
answer
96
views
1
answer
0
votes
2
answers
535
views
2
answers
0
votes
0
answers
87
views
0
answers
Qs about mutect2
gatk wes mutect2 written 29 days ago by walker10
0
votes
0
answers
141
views
0
answers
2
votes
1
answer
93
views
1
answer
1
vote
1
answer
102
views
1
answer
1
vote
0
answers
177
views
0
answers
Question about Base calling for pacbio data
genome indel pacbio snp gatk written 7 weeks ago by kamel0 • updated 6 weeks ago by Vijay Lakhujani3.2k
0
votes
0
answers
160
views
0
answers
1
vote
0
answers
242
views
0
answers
1
vote
0
answers
361
views
0
answers
Adding read group to bam files from multiplexed samples
gatk picard bam written 4 months ago by serpalma.v20 • updated 7 weeks ago by Biostar ♦♦ 20
1
vote
1
answer
286
views
1
answer
0
votes
0
answers
960
views
0
answers
Calling SNPs on Bisulphite Data
bissnp gatk written 3.0 years ago by John12k • updated 8 weeks ago by CEB0
4
votes
1
answer
1.3k
views
1
answer
NCBI dbSNP compatibility w/ Ensembl whole genome
ncbi gatk ensembl written 2.8 years ago by umn_bist320 • updated 8 weeks ago by RamRS19k
5
votes
1
answer
1.4k
views
1
answer
[ERROR] Malformed VCF: empty alleles are not permitted in VCF records
vcf gatk rna-seq written 2.8 years ago by umn_bist320 • updated 8 weeks ago by RamRS19k
3
votes
1
answer
937
views
1
answer
[GATK] Weird error using Picard SortVcf on COSMIC file
gatk picard rna-seq mutect2 written 2.7 years ago by umn_bist320 • updated 8 weeks ago by RamRS19k
9
votes
1
answer
171
views
5 follow
1
answer
0
votes
0
answers
154
views
0
answers
1
vote
1
answer
1.7k
views
1
answer
GATK dbSNP for Ensembl
gatk snp ensembl written 3.5 years ago by bharata1803380 • updated 8 weeks ago by zx87545.7k
3
votes
1
answer
1.2k
views
1
answer
best practices to use GATK with PacBio
gatk next-gen sequence snp pacbio written 2.6 years ago by Medhat8.0k • updated 9 weeks ago by prasundutta87260
5
votes
0
answers
250
views
0
answers
0
votes
0
answers
887
views
0
answers
XHMM GATK exome sequencing deletions genome wide or selected genes ?
gatk genelist xhmm written 2.7 years ago by Floris Brenk860 • updated 9 weeks ago by RamRS19k
3
votes
1
answer
146
views
1
answer
How can i use combination of both -nct and -nt in GATK?
genome gatk forum next-gen written 10 weeks ago by mandecent.gupta0 • updated 10 weeks ago by RamRS19k
2
votes
0
answers
202
views
0
answers
2
votes
1
answer
208
views
1
answer
<prev • 615 results • page 1 of 21 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1755 users visited in the last hour