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Why is `scale-free topology` estimated as -sign(slope) * (R^2) in WGCNA?
wgcna gene expression coexpression written 3 days ago by O.rka • 230
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A RNASeq gene expression browser
gene expression efp rna-seq browser written 6 weeks ago by Light92 • 50 • updated 18 days ago by Biostar ♦♦ 20
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How to map ENSEMBL Transcript IDs to coding/non-coding/miRNA
gene expression microarray mapping hta rna-seq written 26 days ago by SunRise2019 • 10
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Gene expression level is same in normal and cancer tissues
gene expression written 4 weeks ago by sana777munquad • 0
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Are the deconvolved gene expression values (already in fraction) from Cibersotx normalized or require any further normalization like TMM?
cibersortx deconvolution gene expression written 4 weeks ago by Researcher • 60
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How to test gene expression variability - expression differences independent of genotype
gene expression deseq2 rna-seq written 24 months ago by A. Domingues • 2.4k
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Compare gene expression values between L1000 and log2foldchange
l1000 gene expression cmap log2(foldchange) written 5 weeks ago by sslimb95 • 0 • updated 5 weeks ago by sabaijuriya • 0
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Error running gene expression based ProTINA
protina time series gene expression written 8 weeks ago by archie • 100
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Integration of the TCGA's Agilent 244K and Affymetrix data
gene expression agilent 244k tcga affymetrix written 8 weeks ago by Researcher • 60 • updated 8 weeks ago by jared.andrews07 ♦ 8.3k
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Comparison of comparisons with edgeR
gene expression rna-seq edger written 9 weeks ago by Cristina Zamora • 0 • updated 9 weeks ago by GenoMax ♦ 94k
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Can anyone advise about what data to plot in the ROC curve to obtain the sensitivity and specificity of a mRNA as a disease biomarker?
R gene expression microarray roc curve biomarkers written 9 weeks ago by tazyeen.safia • 0 • updated 9 weeks ago by Jean-Karim Heriche ♦ 24k
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5 follow
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Batch effect removal with the help of sva
sva gene expression batch effect written 11 weeks ago by banerjeeshayantan • 190 • updated 11 weeks ago by Papyrus • 620
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Access metadata in GEO expression datasets
geo R gene expression written 3 months ago by priya.bmg • 0
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How to find cell-type specific gene expression signatures
gene expression rna-seq written 3 months ago by nkabo • 50
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Over-Expressed Gene Sample
gene expression rna-seq written 3 months ago by chimerajit • 0
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Forum: Genes inhibiting each other's expression
forum gene expression written 3 months ago by priya.bmg • 0 • updated 3 months ago by i.sudbery ♦ 10k
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Predictive model from gene expression profile of diseased samples
prediction R svm gene expression nanostring written 4 months ago by marion.ryan • 40 • updated 3 months ago by Biostar ♦♦ 20
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Nanostring DEGs Data Analysis using NanoStringDiff R package
bioinformatics gene expression nanostring written 4 months ago by mjavad2012 • 0
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is there any way to filter NCBI datasets by sample type?
gene R gene expression python written 4 months ago by tyasird • 10 • updated 4 months ago by Pierre Lindenbaum ♦ 133k
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Methylation-Gene expression correlation
dna methylation gene expression correlation written 5 months ago by nazaninhoseinkhan • 410 • updated 4 months ago by Kevin Blighe ♦ 69k
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Assessing controls for RNASeq
gene expression deseq rna-seq written 5 months ago by lockdowndog • 0 • updated 5 months ago by i.sudbery ♦ 10k
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Using GeneMeta R Package to meta-analyse multiple gene expression datasets
gene expression genemeta meta-analysis written 5 months ago by psyc_biostars • 0
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Should you normalise gene expression data before meta analysing?
gene expression normalisation written 5 months ago by psyc_biostars • 0
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Can I extract absolute gene expression from Illumina beadchip human microarray?
gene expression microarray written 6 months ago by tigeradab • 50
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RNA-Seq database across rodents
gene expression rna-seq written 6 months ago by qwzhang0601 • 70
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Best correlation between the expression of a given gene and the rest of genes in scRNAseq data
gene expression correlation rna-seq written 6 months ago by mmalumbresm • 0
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7 follow
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Illumina HumanHT-12 V3.0 expression beadchip reading data
illumina gene expression affy microarray written 10 months ago by bhargavdave1 • 0 • updated 6 months ago by zhijianzheng007 • 20
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Gene expression from cell counts matrix
gene expression rna-seq written 6 months ago by re_raz • 0 • updated 6 months ago by GenoMax ♦ 94k
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Methylation Analysis EPIC array
methylation dmrcate gene expression minfi written 6 months ago by Will Yam • 10
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107 follow
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Tutorial: Survival analysis with gene expression
geo survival analysis tutorial gene expression cox written 2.2 years ago by Kevin Blighe ♦ 69k • updated 7 months ago by Hamtaro • 10
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