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What is the best test to compare the expression of two different sets of genes in the same transcriptome?
gene R rna-seq written 17 hours ago by Pas • 20 • updated 2 hours ago by Jean-Karim Heriche ♦ 13k
1
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64
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extract sequences based on ids file
gene genome sequence written 3 hours ago by Mehmet • 170 • updated 3 hours ago by Alex Reynolds ♦ 20k
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60
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reorder sequences in fasta file based on ids from different file
gene genome sequence written 3 hours ago by Mehmet • 170
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105
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gene prediction in diabetes type II
gene rna-seq written 1 day ago by holynafas • 0
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2
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386
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5 follow
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gene list annotation
genome gene software error written 7 months ago by rajesh • 10 • updated 1 day ago by EagleEye • 4.7k
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113
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1
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gene list to disease ontology ID of each gene
genome gene software error written 1 day ago by rajesh • 10 • updated 1 day ago by EagleEye • 4.7k
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7 follow
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Professor assign me some tasks, gene ontology sucks. Anyone please guide me, i am trying it since last 5 months.
gene gene ontology proteins sequencing written 3 days ago by arjahejo • 0 • updated 2 days ago by Alex Reynolds ♦ 20k
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1
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126
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1
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Feature/Motif Extraction from Sequences?
genome sequence alignment snp gene written 4 days ago by ad • 30 • updated 2 days ago by simon.vanheeringen • 20
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1
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137
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1
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What cause the differences between genes annotations from different databases?
gene database next-gen written 3 days ago by magicpants • 20 • updated 3 days ago by Jean-Karim Heriche ♦ 13k
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How can I handle 5 different time series gene expression pattern for the yeast gene SAM3 to infer gene functions for similarities between microarray time series gene expression patterns?
gene written 26 days ago by Thomas.F.Hahn3 • 20 • updated 3 days ago by Biostar ♦♦ 20
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76
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Match reads from sam (first col) to fastq file and extract to a file
genome gene next-gen sequence sequencing written 3 days ago by pup-ccmb • 0
3
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1
answer
121
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1
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Why genomic information shown in UCSC/Ensembl browser for a specific gene is different from it's bed file?
genome gene next-gen ensembl ucsc written 4 days ago by bioinf_data-analyst9449 • 0 • updated 4 days ago by genecats.ucsc • 340
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2
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109
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How to check relations in gene ontology?
gene reasoning go ontology written 4 days ago by jachymb • 0 • updated 4 days ago by Pierre Lindenbaum ♦ 98k
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103
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python dynamic output for biological sequences
gene python draw genome written 4 days ago by andynkili • 10
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1
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139
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1
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Dataset preparation for driver/passenger gene discovery
gene tcga snv snp cancer written 6 days ago by mhasa006 • 10 • updated 5 days ago by Kevin Blighe • 1.2k
0
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1
answer
126
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1
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Data analysis using statistics
gene statistics written 8 days ago by sharmatina189059 • 0 • updated 8 days ago by Jean-Karim Heriche ♦ 13k
0
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1
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124
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1
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standalone BLAST parametes
genome gene blast written 8 days ago by cvu • 110 • updated 8 days ago by Macspider • 1.5k
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2
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114
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2
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How to add the suffix if the entries are the same in fasta file
gene sequencing written 9 days ago by horsedog • 20 • updated 9 days ago by Brian Bushnell ♦ 14k
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111
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db with effect of SNP on gene or regulatory region
gene snp written 9 days ago by theoharis • 0
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108
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Compare mus musculus and mus spretus genome structure annotation
gene model annotation written 9 days ago by arta • 0
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99
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Database of PLANT cloned genes/How to get sequences of gene symbols
gene sequence written 9 days ago by User000 • 240
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1
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129
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1
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how to show geographical relationship of contigs from the two assemblies
gene assembly alignment sequencing written 9 days ago by Mehmet • 170 • updated 9 days ago by h.mon ♦ 8.7k
5
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2
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141
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2
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Genes around open regions
gene genes open atac-seq written 10 days ago by g.sathish.k • 0 • updated 10 days ago by Alex Reynolds ♦ 20k
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3
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128
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3
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To retrieve bacterial Phylum and Class information from a set of tax id
gene next-gen sequence rna-seq snp written 10 days ago by sinumolgeorge • 0 • updated 10 days ago by Brian Bushnell ♦ 14k
1
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1
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123
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1
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enrichment analysis tools
gene enrichment de expression rna-seq written 11 days ago by vm.higareda • 0 • updated 11 days ago by EagleEye • 4.7k
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94
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GSEA Heatmap Expression Scale
gene rna-seq gsea heatmap written 11 days ago by pat.longjump • 0
2
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2
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145
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2
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Bias in hypergeometric test
gene association hypergeometric test drug written 11 days ago by kakukeshi • 0 • updated 11 days ago by vchris_ngs • 4.0k
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111
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Rn28s1 28S ribosomal RNA [ Mus musculus] annotation in GTF file
genome gene rna-seq sequencing written 11 days ago by efratk • 0
2
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1
answer
139
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1
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how to name a gene
genome gene written 11 days ago by mm521 • 0 • updated 11 days ago by h.mon ♦ 8.7k
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117
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0
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query on epitopes of receptors
gene sequencing written 12 days ago by aaronpoh • 0
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