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I have differentially expressed protein IDs that were scored between Wild-type E coli and E coli (with knockout gene). How can I generate a plot to show differences in terms of functional analysis.
geneontology proteins go goslim written 2 days ago by tpm • 0
3
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186
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How are GO biological processes and pathways related?
pathway geneontology go written 3 months ago by D3xt3r • 0 • updated 3 months ago by i.sudbery ♦ 7.6k
4
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133
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5 follow
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How can I discover gene function on a bacterial genome
gene geneontology bacteria ontology written 3 months ago by vicslab • 0 • updated 3 months ago by onestop_data • 260
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3.7k
views
6 follow
1
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GO analysis using topGO Arabidopsis
geneontology goenrichment topgo rna-seq written 3.1 years ago by Sreeraj Thamban • 140 • updated 14 months ago by Kevin Blighe ♦ 59k
3
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Given a list of cell surface genes, is there a computational possibility to predict their interaction partners on the surface of another cell?
gene R rna-seq fibroblasts geneontology written 16 months ago by charlesgwellem • 0 • updated 16 months ago by kristoffer.vittingseerup • 3.2k
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12 follow
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Gene Set Enrichment Analysis after DESeq2
geneontology deseq2 rna-seq gsea written 2.6 years ago by Sreeraj Thamban • 140 • updated 18 months ago by enxxx23 • 230
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535
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How do transcript-level gene ontology
geneontology transcript written 19 months ago by lkianmehr • 30
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How to calculate GOsimilarity between different species
similarity geneontology comparativegenomic R written 3.5 years ago by teresa.noviello89 • 0 • updated 3.0 years ago by e.rempel • 810
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Difference GO terms Uniprot and PANTHER
geneontology panther uniprot go written 3.1 years ago by padgaus • 50 • updated 3.1 years ago by Jean-Karim Heriche ♦ 22k
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Gene Ontology term enrichment tools that count duplicate/redundant genes
geneontology go genomics ontology written 3.2 years ago by memory_donk • 290 • updated 3.2 years ago by Carlo Yague • 5.0k
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6 follow
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Ggplot for Gene ontology data
geneontology ggplot rna-seq written 3.4 years ago by Kritika • 260 • updated 3.4 years ago by raya.girish • 20
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News: Published: GeneSCF: a real-time based functional enrichment tool with support for multiple organisms
tool cancer geneontology news kegg geneenrichment written 3.7 years ago by EagleEye ♦ 6.6k • updated 3.7 years ago by Mike • 1.5k
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AWK Join two files does not work
gawk bash awk refgene geneontology written 4.1 years ago by pablosolar.r • 20 • updated 4.1 years ago by lh3 ♦ 32k
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GO enrichment analysis on Non-model Organism
geneontology enrichment analysis written 4.7 years ago by EVR • 570 • updated 4.7 years ago by Jean-Karim Heriche ♦ 22k
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can i perform gene ontology using microarray gene expression data?
genome geneontology tutorial microarray written 4.7 years ago by fzrh • 10 • updated 4.7 years ago by Devon Ryan ♦ 95k
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