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Ran dipSpades for a diploid fungus genome -- now what?
dipspades diploid genome assembly written 3.0 years ago by Lina F180 • updated 1 day ago by Biostar ♦♦ 20
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meaning of CheckM output
contigs checkm genome assembly written 10 weeks ago by zhangdengwei130 • updated 10 weeks ago by Asaf8.4k
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kmer counting for heterozygosity estimation
heterozygosity kmer jellyfish genome assembly written 8 months ago by el9700410 • updated 8 months ago by Dattatray Mongad350
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Genome assembly of pacbio reads with SMRT Link
pacbio hgap tool smrtlink genome assembly written 10 months ago by star71520 • updated 8 months ago by Biostar ♦♦ 20
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Identify AMR genes from WGS bacterial sequence
wgs bacteria amr genome assembly written 16 months ago by bioinforesearchquestions280 • updated 16 months ago by ctseto280
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Genome structural annotation (augustus)
augsutus gene annotation genome assembly written 20 months ago by SP270 • updated 20 months ago by Kay10
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SPAdes assembler k-mer > default 127 possible?
k-mer spades genome assembly written 3.1 years ago by Anand Rao320 • updated 2.3 years ago by ikangkim40
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Assemble genomes from different sequencing platforms
genome assembly written 2.4 years ago by Elizabeth20 • updated 2.4 years ago by Damian Kao15k
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Finding and plotting gaps in denovo assembly in R
gaps R genome assembly written 2.5 years ago by alslonik140 • updated 2.5 years ago by Sean Davis26k
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Is BUSCO really better than CEGMA for genome assembly quality evaluation?
cegma busco genome assembly written 2.7 years ago by shelkmike270 • updated 2.5 years ago by h.mon31k
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gmsn.pl Matrix Creation Help
gmsn.pl genemark genome assembly written 3.0 years ago by zshores0 • updated 3.0 years ago by Biostar ♦♦ 20
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Running ABySS at k-mer > 97
k-mer abyss genome assembly written 3.1 years ago by Anand Rao320 • updated 3.1 years ago by benv710
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ABySS run problems
de novo mpi abyss genome assembly written 3.1 years ago by Anand Rao320 • updated 3.1 years ago by benv710
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