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kmer counting for heterozygosity estimation
heterozygosity kmer jellyfish genome assembly written 12 weeks ago by el9700410 • updated 12 weeks ago by Dattatray Mongad350
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Genome assembly of pacbio reads with SMRT Link
pacbio hgap tool smrtlink genome assembly written 5 months ago by star71520 • updated 3 months ago by Biostar ♦♦ 20
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Identify AMR genes from WGS bacterial sequence
wgs bacteria amr genome assembly written 10 months ago by bioinforesearchquestions280 • updated 10 months ago by ctseto280
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Ran dipSpades for a diploid fungus genome -- now what?
dipspades diploid genome assembly written 2.5 years ago by Lina F160 • updated 12 months ago by mss30
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Genome structural annotation (augustus)
augsutus gene annotation genome assembly written 14 months ago by SP250 • updated 14 months ago by Kay0
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SPAdes assembler k-mer > default 127 possible?
k-mer spades genome assembly written 2.6 years ago by Anand Rao280 • updated 22 months ago by ikangkim40
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Assemble genomes from different sequencing platforms
genome assembly written 24 months ago by Elizabeth20 • updated 24 months ago by Damian Kao15k
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Finding and plotting gaps in denovo assembly in R
gaps R genome assembly written 2.0 years ago by alslonik130 • updated 2.0 years ago by Sean Davis26k
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Is BUSCO really better than CEGMA for genome assembly quality evaluation?
cegma busco genome assembly written 2.2 years ago by shelkmike130 • updated 2.0 years ago by h.mon29k
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gmsn.pl Matrix Creation Help
gmsn.pl genemark genome assembly written 2.6 years ago by zshores0 • updated 2.5 years ago by Biostar ♦♦ 20
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Running ABySS at k-mer > 97
k-mer abyss genome assembly written 2.6 years ago by Anand Rao280 • updated 2.6 years ago by benv710
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ABySS run problems
de novo mpi abyss genome assembly written 2.6 years ago by Anand Rao280 • updated 2.6 years ago by benv710
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How denovo assemblers handle N's in reads?
genome assembly written 3.1 years ago by saranpons370 • updated 3.1 years ago by Brian Bushnell17k
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Mauve Similarity plots - similar or not?
mauve genome assembly written 3.7 years ago by rrcutler120 • updated 3.7 years ago by aaron.darling40
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N50 reduces after scaffolding
sspace discovar scaffolding genome assembly written 3.9 years ago by JstRoRR60 • updated 3.8 years ago by krsahlin60
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Comparing a draft genome with its neighbour species genomes
de novo mummer genome assembly written 4.1 years ago by pbigbig200 • updated 4.1 years ago by Philipp Bayer6.6k
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Genome Assembly for a Beginner
genome assembly genome assembly written 4.2 years ago by '260 • updated 4.2 years ago by poisonAlien2.8k
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