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3
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1
answer
1.3k
views
1
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Phylogeny based on multiple sequences
genome gene next-gen alignment written 4.2 years ago by Mehmet • 510 • updated 3 hours ago by eeb109 • 0
1
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0
answers
63
views
0
answers
How to extract certain CDS from a GenBank file in linux terminal
gene genome sequence written 12 hours ago by arriyaz.nstu • 0
0
votes
0
answers
61
views
0
answers
[GNOMAD v2]How to count the number of heterozygous individuals
genome heterozygous individuals gnomad snp written 1 day ago by leeray00151 • 10
1
vote
2
answers
83
views
2
answers
Conversion of Vep.vcf to MAF format?
maf genome vep snp cancer written 8 days ago by thind.amarinder • 20
0
votes
0
answers
53
views
0
answers
Gffread_How to obtain fasta files of gene features (ORF, UTR) by transcripts based on gff?
genome assembly sequence rna-seq gene written 1 day ago by tianshenbio • 40
2
votes
1
answer
94
views
1
answer
GWAS vs other bioinformatics methods
genome gene rna-seq written 2 days ago by warriorgirl073095 • 0 • updated 1 day ago by gdaly9000 • 10
2
votes
1
answer
80
views
1
answer
How to extract sequence of a specific feature in gff
genome assembly gff rna-seq written 2 days ago by tianshenbio • 40 • updated 1 day ago by Juke34 • 4.1k
2
votes
1
answer
60
views
1
answer
After read mapping, count exons or genes?
genome featurecounts rna-seq written 2 days ago by tianshenbio • 40 • updated 2 days ago by ATpoint ♦ 34k
0
votes
0
answers
41
views
0
answers
Searching for regex matching sequence upstream and downstream a BLAST hit
genome python microbial biopython regex written 2 days ago by piotrkoper86 • 0
1
vote
1
answer
82
views
1
answer
Phasing a trio in multi-sample vcf with zygosity
genome written 5 days ago by ellieuk • 0 • updated 2 days ago by Pierre Lindenbaum ♦ 128k
9
votes
1
answer
113
views
6 follow
1
answer
Which tool is best for getting genomic data analysis?
hail.is genome tools next-gen data-analysis written 3 days ago by akshaykum684 • 0
1
vote
0
answers
88
views
0
answers
Genomic data analysis - Beginner
genome tutorial beginner dataanalysis written 3 days ago by akshaykum684 • 0
0
votes
1
answer
50
views
1
answer
Subsetting .vcf.gz based on .txt file
gene vcf genome snp sequencing written 3 days ago by chvbs2000 • 0 • updated 3 days ago by Yean • 100
0
votes
0
answers
118
views
0
answers
Adding Gene Name attribute to CDS feature ??
genome annotation gff written 3 days ago by Mostafa Mahmoud • 0
0
votes
0
answers
37
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0
answers
what is the role of the plink .map file in copy number variation analysis?
software error genome written 4 days ago by dongguiying2017 • 0
3
votes
1
answer
2.4k
views
1
answer
How To Retrieve Coding Snps Typed Only In 1000G Data
genome non snp written 8.8 years ago by Sarah Tyrell • 20 • updated 4 days ago by Biostar ♦♦ 20
0
votes
0
answers
92
views
0
answers
Compare columns to find similarities and differences
genome gene sequence snp written 5 days ago by pythonlover • 0
0
votes
0
answers
61
views
0
answers
NaN Error occured when using JSpecies to calculate ANIm and ANIb
genome software error written 5 days ago by xyqfuture • 0
0
votes
1
answer
80
views
1
answer
Biopython vs Python
genome written 5 days ago by mspingdeng • 0 • updated 5 days ago by h.mon ♦ 29k
0
votes
1
answer
69
views
1
answer
How can I filter RNA-seq reads to remove reads where more than 50% of the read is low quality (Q<20)?
genome quality rna-seq filtering written 6 days ago by mar77 • 0
0
votes
0
answers
47
views
0
answers
Filter record of pubmed articles on Humans.
genome written 6 days ago by vikassahalgaur • 0
0
votes
1
answer
65
views
1
answer
Difference between genomic build annotations
genome gene snp written 7 days ago by filippo • 0 • updated 6 days ago by JC ♦ 10k
0
votes
0
answers
69
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0
answers
Advice on how to retrieve and analyze a set of promoters of many genes / to find putative TFs involved in gene expression reguolation based upon a list of co-expressed genes
genome R human written 7 days ago by Eisuan • 0
1
vote
1
answer
59
views
1
answer
get original symbol for a non model organism
genome annotation gene symbol pathway analysis written 7 days ago by mjavad2012 • 0 • updated 7 days ago by JC ♦ 10k
3
votes
1
answer
7.8k
views
1
answer
Scale and Center [normalized] RNA-seq expression counts for PCA ?
genome R pca rna-seq sequencing written 5.3 years ago by gaelgarcia • 170 • updated 7 days ago by majeedmj.ict • 10
1
vote
0
answers
65
views
0
answers
how to check the integrity of a sam file derived from bwa mem?
genome alignment sequencing written 7 days ago by dongguiying2017 • 0
0
votes
0
answers
118
views
0
answers
Integration of data from different platform to perform population genetics analysis
genome assembly gwas rna-seq population genetics written 10 weeks ago by devarora • 150 • updated 7 days ago by Biostar ♦♦ 20
2
votes
0
answers
65
views
0
answers
how to define new discovered genes from list of genes?
genome genes machine learning new genes written 7 days ago by Chaimaa • 180
0
votes
1
answer
74
views
1
answer
detection positive selection using multiple copy genes in orthologs
genome gene sequence written 12 days ago by Mehmet • 510 • updated 7 days ago by h.mon ♦ 29k
6
votes
3
answers
103
views
5 follow
3
answers
Gene prediction programs predicting different genes
genome annotation augustus rnaseq funannotate written 8 days ago by Ambika • 30 • updated 7 days ago by Juke34 • 4.1k
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