Showing: genomicrangesreset
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Assign a genomic region to a window
R bioconductor windows genomicranges written 19 days ago by Ana140 • updated 18 days ago by benformatics650
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How to convert output from bowtie1 to Genomic ranges
genomicranges rna-seq bowtie written 5 weeks ago by Konstantinos Yeles40 • updated 5 weeks ago by ATpoint14k
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How do I subset a GRanges on chromosome, region and strand?
R bioconductor genomicranges written 3 months ago by endrebak85290 • updated 3 months ago by Bastien Hervé3.7k
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Get indices from GenomicRanges reduce function
R genomicranges reduce written 6 months ago by User 7754230 • updated 6 months ago by Nicolas Rosewick7.4k
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Trouble with GenomicFeatures Package
R bioconductor genomicranges genomicfeatures written 12 months ago by MarjoryMollusc40 • updated 6 months ago by zx87546.8k
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R reduce across multiple ranges by row
R genomicranges reduce ranges written 6 months ago by User 7754230 • updated 6 months ago by RamRS20k
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GRanges : setdiff and keep extra columns
genomicranges written 20 months ago by Nicolas Rosewick7.4k • updated 6 months ago by Kevin Blighe39k
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Clustering coordinates based on window size
iranges R genomicranges granges written 10 months ago by user_g20 • updated 10 months ago by Alex Reynolds27k
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Detecting Overlaps within Grange Object
R genomicranges granges written 11 months ago by user_g20 • updated 11 months ago by d-cameron2.0k
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Setting elementMetadata in genomicranges list objects
genomicranges values elementmetadata mcols written 4.8 years ago by reviewer320 • updated 2.8 years ago by leekaiinthesky170
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bedtools intersectBed and GRanges countOverlaps
bedtools R genomicranges bed written 2.9 years ago by User 7754230 • updated 2.9 years ago by Alex Reynolds27k
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HOWTO extract regions from GRanges object
iranges R genomicranges granges subsetting written 3.2 years ago by Assa Yeroslaviz1.2k • updated 3.2 years ago by geek_y9.3k
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extract gene names from bigwig information
genome genomicranges bigwig written 4.1 years ago by tomasscheitel20 • updated 4.1 years ago by Alex Reynolds27k
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How do I summarize a GRanges data frame into "one complete RLE"?
R genomicranges rle granges written 4.8 years ago by kamaitachi0 • updated 4.8 years ago by Devon Ryan88k
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