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How to export subset of metadata and expression data from BioConductor GEOquery?
geo R bioconductor written 6.1 years ago by William4.7k • updated 4 weeks ago by Biostar ♦♦ 20
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series_matrix.txt in GEO are they always the normalized values?
geo series_matrix.txt written 2.3 years ago by Leite1.1k • updated 6 weeks ago by linouhao0
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Preparing GSE data for DESeq2 Analysis
geo deseq2 rna-seq written 3 months ago by thewisechineseguru0 • updated 3 months ago by jared.andrews077.6k
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Getting sample information from GEO
geo ncbi written 3.4 years ago by Tom_L340 • updated 3 months ago by zhangsx.ivan0
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Obtaining gene expression data from GEO
geo R microarray written 3 months ago by silsie64520 • updated 3 months ago by patelk26130
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DESeq2 on GEO dataset
geo R preprocessing deseq2 rna-seq written 6 months ago by hariprasadp.iitkgp0 • updated 4 months ago by Biostar ♦♦ 20
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How to find out p-value format in chip-seq .bed files from GEO
geo pvalue chip-seq written 4 months ago by geenkgo0 • updated 4 months ago by igor11k
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What are these files?
geo bed rnaseq bedgraph written 4 months ago by ebs1524210 • updated 4 months ago by jared.andrews077.6k
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Tutorial: Survival analysis with gene expression
geo survival analysis tutorial gene expression cox written 2.0 years ago by Kevin Blighe66k • updated 4 months ago by Hamtaro10
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extracting count matrix from GEO
geo written 4 months ago by lordoftheflower10 • updated 4 months ago by Kevin Blighe66k
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GEO raw data download
geo methylation written 4 months ago by kwanghoon10 • updated 4 months ago by Kevin Blighe66k
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Downloading data onto R STUDIO
geo R tcga written 4 months ago by silsie64520
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Drop values in expression dataset python
geo python geoparse rna-seq written 5 months ago by highfillchad0 • updated 5 months ago by zorbax210
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Analysing GSE datasets with GEOquery
geo R rna-seq written 3.4 years ago by IsmailM110 • updated 5 months ago by meteorickliu0
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log2 RSEM data
geo galaxy rna-seq written 5 months ago by pbm110 • updated 5 months ago by RamRS30k
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RNA-seq data for binary classification problem
geo R tcga classification rna-seq written 6 months ago by Abhi0 • updated 6 months ago by igor11k
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Download NCBI GEO dataset
geo gse rna-seq written 6 months ago by DataFanatic260 • updated 6 months ago by wm490
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