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<prev • 197 results • page 1 of 7 • next >
7
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Patch for GEOquery package error: getGEO Error in download.file, cannot open destfile
geo R tutorial geoquery microarray written 6 months ago by martinguerrerog89 • 250 • updated 5 days ago by zx8754 ♦ 4.7k
4
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1
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58
views
1
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series_matrix.txt in GEO are they always the normalized values?
geo series_matrix.txt written 14 days ago by Leite • 280 • updated 13 days ago by Kevin Blighe ♦ 24k
0
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0
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94
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0
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How can I add gene symbol name in to gpl.soft file?
geo R gene written 20 days ago by gbahramali • 20 • updated 20 days ago by zx8754 ♦ 4.7k
0
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89
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GEO Affymetrix microarray datasets: how are series matrix files obtained from CEL files?
geo probes probe sets microarray cel written 28 days ago by Ld_60 • 20
47
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4
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30 follow
4
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How To Download All Sra Samples At Once ?
geo sra download written 4.4 years ago by biorepine • 1.4k • updated 5 weeks ago by Federico Giorgi • 410
4
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0
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190
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Tool: GREIN: An interactive web platform for re-processing and re-analyzing GEO RNA-seq data
geo enrichment processed data tool rna-seq written 6 weeks ago by Naim.Mahi • 40
0
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1
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162
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1
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Finding Gene Symbols for Probes in Raw Data
gene gpl gse chip-seq geo written 8 weeks ago by samet • 0
3
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0
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221
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0
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How to handle Log2 Transformation that creates Nan Values
geo R microarray limma written 3 months ago by farzaneafzali • 10 • updated 3 months ago by WouterDeCoster ♦ 30k
1
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1
answer
234
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1
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Unit of gene expression in GEO2R
genome geo expression geo2r gene written 3 months ago by sina.majidian • 0 • updated 3 months ago by Kevin Blighe ♦ 24k
1
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1
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172
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1
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GEO2R Application and Uses
geo geo2r computational biology written 4 months ago by iamvarda9000 • 0
0
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1
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511
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1
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Data mining for 300 genes from GEO
geo written 14 months ago by RT • 330 • updated 4 months ago by Biostar ♦♦ 20
2
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1
answer
209
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1
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Differential Expression fro GEO Data
geo R limma rna-seq written 4 months ago by kalyanimeha • 20 • updated 4 months ago by Sean Davis ♦ 24k
0
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325
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How to find up-regulated and down-regulated genes after GEO2R analysis?
geo up-regulated genes geo2r down-regulated written 4 months ago by DK • 50
4
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0
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251
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0
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Analysis of public RNA seq datasets
geo rna-seq differential expression pipelines written 4 months ago by fawazfebin • 0
6
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2
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2.0k
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2
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Get a complete GSM-to-SRX/SRR table
geo sra gsm gse sradb written 16 months ago by predeus • 590
0
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0
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398
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0
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how to find a particular GEO dataset or cohort in cBioportal and TCGA
geo R gdac tcga cbioportal written 5 months ago by CuriusScientist • 30
1
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2
answers
284
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2
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Downloading multiple samples with GEO accesion numbers
geo microarray written 5 months ago by osieman52 • 10
171
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8
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67k
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153 follow
8
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Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 3.9 years ago by Obi Griffith ♦ 16k • updated 5 months ago by simplitia • 20
0
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0
answers
252
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0
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GEOquery and MethylAnalysis
geo R methylumi geoquery methylation written 5 months ago by alex.v.nesta • 0
1
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0
answers
303
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0
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how to use "marray"and "lumi"packages
marray geo lumi written 7 months ago by a511512345 • 60 • updated 6 months ago by Biostar ♦♦ 20
1
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0
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353
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0
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Need help in downloading CEL files for multiple datasets from GEO in one go
geo R next-gen rna-seq python written 6 months ago by sndbt123 • 0
13
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3
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2.7k
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6 follow
3
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Geo Profiles: Downloading Profile Data.
geo ncbi api written 7.5 years ago by Pierre Lindenbaum ♦ 110k • updated 7 months ago by Biostar ♦♦ 20
2
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1
answer
436
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1
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Retrieving age metadata for GEO samples
geo metadata written 7 months ago by EverInEarnest • 30 • updated 7 months ago by Sean Davis ♦ 24k
7
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0
answers
1.3k
views
0
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Tool: Digital Expression Explorer
geo tool rna-seq written 2.8 years ago by mark.ziemann • 1.1k
0
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0
answers
488
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0
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How to read large GEO series matrix file when getGEO fails
geo R microarray written 8 months ago by hzc363 • 0
0
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1
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699
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1
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Error in retrieving SupportFiles from GEO
geo R geoquery geo2r written 2.2 years ago by 786 • 50 • updated 8 months ago by Sean Davis ♦ 24k
21
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1
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712
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6 follow
1
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build the expression matrix step by step from GEO raw data
geo written 8 months ago by a511512345 • 60 • updated 8 months ago by Kevin Blighe ♦ 24k
1
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2
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951
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2
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Accessing Expression Levels for Genes of Interest from GEO Experiments
geo fpkm rna rna-seq lncrna written 2.4 years ago by a.aiezza • 30 • updated 9 months ago by Biostar ♦♦ 20
0
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0
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362
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0
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GEO2R - significantly DEGs
geo geo2r deg written 9 months ago by hcv • 0
1
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1
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485
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1
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Where to find DNase-seq and RNA-seq assays for various cancer lines?
genome geo dnase-seq rna-seq sequencing written 10 months ago by bhchiang • 0 • updated 10 months ago by jared.andrews07 • 750
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