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How much the sorting order of a gff file matters?
annotation gff rna-seq written 6 weeks ago by Shred220 • updated 6 weeks ago by Juke344.8k
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GFF3 transcript name
gff3 gff transcript resource written 6 weeks ago by blur140
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Convert .gbff (gene bank flat format) to gff3, gtf
genome gtf gff genebank gbff written 7 weeks ago by alex0 • updated 7 weeks ago by Juke344.8k
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Parsing GFF with biopython throws error
gff biopython written 3 months ago by Juliofdiaz130 • updated 9 weeks ago by Biostar ♦♦ 20
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intersection of two GFFs
bedtools gff intersect written 4 months ago by BioDH0 • updated 3 months ago by Biostar ♦♦ 20
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Tutorial: Sorting GFF/GTF files
gtf gff sort annotation forum tutorial written 3 months ago by Juke344.8k
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Motif search on a DNA sequence in a gff file (ipdSummary output)
python gff ipdsummary motif bash written 3 months ago by gabri50 • updated 3 months ago by Joe18k
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How to run HISAT2 / Stringtie / Ballgown analysis starting with gff file
gtf gff stringtie hisat2 written 3.8 years ago by al-ash140 • updated 3 months ago by Biostar ♦♦ 20
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How To Convert Blast Results To Gff
gff format blast written 10.6 years ago by Michael Barton1.8k • updated 4 months ago by Biostar ♦♦ 20
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lowercase fasta coordinates to GFF
lowercase fasta gff written 5.6 years ago by Biomonika (Noolean)3.1k • updated 4 months ago by bcontreras0
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Correct gtf file format (AGAT toolkit)
gtf gff3 gff agat rna-seq written 4 months ago by tianshenbio50 • updated 4 months ago by Juke344.8k
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IGV memory on Windows
gff igv written 6 months ago by liorglic330 • updated 4 months ago by Jim Robinson290
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How to extract sequence of a specific feature in gff
genome assembly gff rna-seq written 4 months ago by tianshenbio50 • updated 4 months ago by Juke344.8k
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Extract ID and go terms from annotation gff file, one go term per line
go term gff written 5 months ago by Cecelia20 • updated 5 months ago by JC11k
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