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<prev • 249 results • page 1 of 9 • next >
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Predicting coding sequence region from GFF with exons + reference genome
genome annotation gff augustus maker written 14 hours ago by Grey Monroe • 0
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1
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78
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1
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generating 'maximal' cds sequence from multiple isoforms of a gene
gene cds gff written 7 days ago by mforthman • 30 • updated 7 days ago by Brice Sarver • 3.1k
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1
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101
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1
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Visualize short nucleotide sequences and some ranges on top
bed gff visualization written 8 days ago by mschmid • 110 • updated 7 days ago by bernatgel • 2.1k
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57
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Relate CDS annotation to parent gene
genome gff written 8 days ago by Mostafa Mahmoud • 0
2
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106
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Extracting START and STOP codon position from Augustus GFF
augustus gff3 grep gff gene prediction written 8 days ago by mhfk2901 • 10
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174
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Converting assembled genomes (.fna) and predicted genes (.faa) to genbank or gff file?
genome annotation gff microbiology genbank written 9 weeks ago by bioguy • 40 • updated 27 days ago by Biostar ♦♦ 20
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182
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5 follow
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How to annotate FASTA genome using GFF genes from another genome?
fasta annotation gff program genome written 3 months ago by Macspider • 3.0k
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4
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13 follow
4
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How To Count The Reads Mapped To Exon And Exon-Exon Junctions?
reads gff exon sam bam written 6.4 years ago by lwc628 • 210 • updated 4 months ago by m13113153781 • 0
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234
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6 follow
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Convert fasta headers to GFF
htseq gff tophat rna-seq parsing written 4 months ago by alexis.groppi • 30
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1
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Tabix With Gff3
gff3 tabix gff written 5.7 years ago by kevin.mohamed1992 • 0 • updated 4 months ago by Biostar ♦♦ 20
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1
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1.5k
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1
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What Is The Correct Specification For Gff3?
gff3 gff written 6.9 years ago by Alex Reynolds ♦ 29k • updated 4 months ago by Biostar ♦♦ 20
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2
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6.5k
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8 follow
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How To Merge Gff Files
gff merge written 6.5 years ago by upendrakumar.devisetty • 350 • updated 4 months ago by O.rka • 120
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2
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230
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remove UTR annotations from gff
gff written 4 months ago by rob234king • 570 • updated 4 months ago by Ace • 60
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1
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256
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1
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Distance of promoter from TSS
annotation gff promoter transcription written 5 months ago by ognjen011 • 170 • updated 5 months ago by mrals89 • 50
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0
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231
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0
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Amino acid sequence from CDS information of gff file
cds gff amino acid written 5 months ago by doubleA • 0
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0
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281
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Annotation problem while using Rsubread
gtf annotation gff written 5 months ago by gokberk • 60
2
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1
answer
215
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1
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how to get gff file bos tau8 from ucsc to import in usegalaxy
gff ucsc htseq-count usegalaxy written 6 months ago by Kian • 40
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255
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How to get hold of the gff files for RepeatMAsker annotated human genome
genome gff repaetmasker human written 6 months ago by kwicher • 10
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296
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0
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GTF from consensus sequence
gtf fasta gff written 7 months ago by lfiedlerc • 10
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0
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298
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0
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IGB won't open .gff file.
genome gff3 gff igb sequencing written 8 months ago by sj93 • 10
3
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1
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360
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1
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Number of discovered genes in genome does not correspond with published annotation
ncbi genome gff rna-seq annotation written 8 months ago by P16226 • 0 • updated 8 months ago by kashiff007 • 100
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717
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Filtering GFF annotations file
R gff maker written 9 months ago by alslonik • 110
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1
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729
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1
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Getting GFF annotation from sequence coordinates.
ncbi python gff gene annotation written 9 months ago by jsporter • 60
12
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2
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694
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8 follow
2
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Visualize multiple GFF files
overlap gff visualization statistics written 14 months ago by Anand Rao • 240 • updated 9 months ago by Joe ♦ 14k
5
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1
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654
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1
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'CDS' but not 'exon' in GFF
cds gff exon rna-seq written 10 months ago by NielQC • 10 • updated 9 months ago by tdmurphy • 170
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2.1k
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Gff file error in HTSeq-count
gff htseq count written 2.4 years ago by y.gladbach • 0 • updated 9 months ago by Biostar ♦♦ 20
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310
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How to get non-redundant set from multiple GFF files
gene gff homology-based gene prediction written 9 months ago by bio_d • 0
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546
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0
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Merging 2 GFF files
gff3 gff combine merge written 10 months ago by bwczech • 70
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1
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1.9k
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1
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How to convert genomic position to transcript position?
gff written 3.6 years ago by biolab • 1.1k • updated 11 months ago by Biostar ♦♦ 20
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1
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Convert bed12 to GFF
bed gff bed12 written 2.7 years ago by cmdcolin • 1.2k
<prev • 249 results • page 1 of 9 • next >
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