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<prev • 222 results • page 1 of 8 • next >
0
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3.0k
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GFF3 to GTF
gtf gff written 2.6 years ago by silas008 • 70 • updated 8 days ago by RamRS ♦ 17k
2
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1
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121
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5 follow
1
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Merging position of all different CDS of a single gene in one line
cds gff gene duplication written 12 days ago by 1234anjalianjali1234 • 30 • updated 12 days ago by rjactonspsfcf • 50
4
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1
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2.1k
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1
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Cufflinks gffread utility
gff cufflinks reverse complement gffread written 2.3 years ago by Thomas • 90 • updated 14 days ago by madzayasodara • 0
5
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1
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2.4k
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1
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Merging Blastx Hits From Overlapping Bacterial Genome Segments
genome annotation gff bacteria blast written 8.6 years ago by Darked89 ♦ 4.2k • updated 17 days ago by RamRS ♦ 17k
6
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1
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113
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5 follow
1
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Calculate CDS phase in gff3 format
genome feature format cds gff phase written 26 days ago by marongiu.luigi • 300 • updated 26 days ago by Carambakaracho • 510
2
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1
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934
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1
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Convert bed12 to GFF
bed gff bed12 written 19 months ago by cmdcolin • 870 • updated 5 weeks ago by ta_awwad • 150
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0
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117
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0
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Visualize multiple GFF files
overlap gff visualization statistics written 5 weeks ago by Anand Rao • 160
7
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1
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160
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1
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What is wrong with NCBI's gff file?
gff written 6 weeks ago by rimgubaev • 70
1
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1
answer
129
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1
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some questions on GFF3
gtf annotation gff written 7 weeks ago by prasundutta87 • 200
1
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1
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164
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1
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gffread query for gff to gtf conversion
gtf annotation gff software written 7 weeks ago by prasundutta87 • 200
0
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1
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119
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1
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gffread error when converting gff to gtf
gtf software error gff gffread written 7 weeks ago by LucasK • 0 • updated 7 weeks ago by Jeffin Rockey • 690
2
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1
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124
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1
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collapsing GFF coordinates with common start OR stop
bedtools perl gff parse script written 9 weeks ago by Anand Rao • 160 • updated 9 weeks ago by h.mon ♦ 19k
5
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2
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510
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2
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How to extract all promoter regions in multi-fasta format from genome using GFF?
genome fasta gff promoter written 8 months ago by rimgubaev • 70
1
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1
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172
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1
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ssrs filtering from gff3 file
genome gff rna-seq ssrs written 11 weeks ago by moohit21 • 0 • updated 11 weeks ago by Vijay Lakhujani ♦ 3.0k
0
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0
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198
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0
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Training GeneMark-ES: Data format error; gmhmme3 : warning, evidence_training.gff line ignored
evidence gff genemark-es training written 11 weeks ago by gabri • 40
0
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0
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128
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0
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prepare a GFF file for MOCK fasta reference
genome gff sequence written 3 months ago by Sam • 70
1
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1
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913
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5 follow
1
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Variant Effect Predictor parameters for custom gff and fasta
fasta gff vep snp written 20 months ago by R.Blues • 80 • updated 3 months ago by nicolas.dussex • 30
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2
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6.3k
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10 follow
2
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Get intronic and intergenic sequences based on gff file
gff written 4.0 years ago by biolab • 1.0k • updated 3 months ago by zx8754 ♦ 5.0k
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2
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1.8k
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2
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Converting from BED to SAF/GFF
saf bed gff featurecount written 21 months ago by ccag • 30 • updated 3 months ago by ATpoint ♦ 7.5k
2
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1
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263
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1
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How do I filter out transcripts with less than two exons
bedtools bed gff galaxy written 3 months ago by alex.v.nesta • 0 • updated 3 months ago by cpad0112 • 9.0k
0
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1
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220
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5 follow
1
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getting a combination of all predicted genes
bedtools gff written 4 months ago by bitpir • 90 • updated 4 months ago by Alex Reynolds ♦ 25k
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182
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GFF liftOver using CrossMap is failing.
software error gff crossmap liftover written 4 months ago by kirannbishwa01 • 860
45
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4
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41k
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20 follow
4
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Convertion Of Gff3 To Gtf
gtf gff written 6.3 years ago by geek_y ♦ 8.7k • updated 4 months ago by Asbesto • 0
1
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1
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178
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1
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Using GFF3Writer in Biopython
gff3 ensembl gff biopython written 4 months ago by Alice • 230 • updated 4 months ago by finswimmer ♦ 5.4k
2
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1
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169
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1
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Get summary of augustus ouput (gff)
augustus gff written 4 months ago by Toto26 • 10 • updated 4 months ago by goodez • 260
2
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1
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243
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1
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IGV tracks gene annotation
gene gff igv written 4 months ago by bitpir • 90 • updated 4 months ago by h.mon ♦ 19k
5
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2
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10k
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2
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Gff Or Bed File For Hg19 Genome
genome seq gff hg19 written 5.1 years ago by rob.costa1234 • 150 • updated 4 months ago by h.mon ♦ 19k
6
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1
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196
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1
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Removal of gene sequences from genome.
genome gff blast written 4 months ago by Candah • 70 • updated 4 months ago by Pierre Lindenbaum ♦ 112k
3
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0
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325
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0
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using awk to extract a specific pattern
gff awk extract parsing written 5 months ago by Toto26 • 10
1
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1
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317
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1
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bedtools getfasta (how to get only cds coding sequence)
mac fasta gff written 5 months ago by benjamin • 0
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