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How to modify the nodes features in Gradient1 style in Cytoscape?

cytoscape string gradient1 3d written 14 months ago by Farah • 70 • updated 13 months ago by xanderpico • 330

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Recent Replies

C: How to confirm if VCF file is normalized and Left aligned ? by _r_am ♦ 32k
> author of such an awesome tool to commit without building Everyone is human, and people can...
C: How to confirm if VCF file is normalized and Left aligned ? by vaibhash • 0
I guess its more about "control" than any other reason ... I will ask if vt can be installed, and...
A: GATK BaseRecalibratore Error by daffodil • 10
Dear Pierre Thanks a lot It is done:)
C: How to confirm if VCF file is normalized and Left aligned ? by _r_am ♦ 32k
bcftools also does left alignment. If your sysadmin won't allow conda, ask them to install vt. Th...
C: Creating a non-coding RNA index for STAR by GenoMax ♦ 95k
Then you could simply use counts for the `coding` entries from GTF file after the STAR alignment....
C: GO analysis using topGO by avelarbio46 • 10
> goEnrichment$KS <- as.numeric(goEnrichment$KS) should come before filtering KS!
A: GATK BaseRecalibratore Error by Pierre Lindenbaum ♦ 133k
remove space in ' /`home/hg19/snp/ dbsnp_138.hg19.vcf`' (=> `/home/hg19/snp/dbsnp_138.hg19.vc...
A: merging VCFs with non-overlapping sets of variants but partially overlapping set by Pierre Lindenbaum ♦ 133k
use GATK **_3.8_** CombineVariants. https://github.com/broadinstitute/gatk-docs/blob/master/gat...
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This is not exactly what you are asking for, but still it may be helpful. http://prodata.swmed.e...
A: Bioinformatics papers and books to recommend? by Mensur Dlakic • 8.3k
If you are willing to pay $85 (for paperback edition), I recommend this book: https://www.amazon...
C: Creating a non-coding RNA index for STAR by plberry • 10
I am using raw public RNC-seq, mRNA-seq, and Ribo-seq datasets to explore sequence and codon choi...
C: Creating a non-coding RNA index for STAR by GenoMax ♦ 95k
You should use the correct tool for the job at hand. That said what is the rest of the data suppo...

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