Showing: grangesreset
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GenomicRanges : How to reduce a GRanges by gene
R genomicranges reduce granges written 24 days ago by Nicolas Rosewick7.9k • updated 24 days ago by zx87547.8k
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Removing overlaps in GRange function
iranges R granges firebrowse raster written 9 months ago by jmw7300 • updated 9 months ago by zx87547.8k
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Calculate distances between items in different GRanges
R bioconductor granges written 2.5 years ago by igor8.0k • updated 12 months ago by zx87547.8k
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Clustering coordinates based on window size
iranges R genomicranges granges written 14 months ago by user_g20 • updated 14 months ago by Alex Reynolds28k
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Detecting Overlaps within Grange Object
R genomicranges granges written 15 months ago by user_g20 • updated 15 months ago by d-cameron2.0k
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Is possible to convert BSgenome object to GRange?
bsgenome granges written 18 months ago by Lila M 770 • updated 18 months ago by Devon Ryan91k
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How to save GRanges object to csv file
export granges written 23 months ago by akij90 • updated 23 months ago by Charles Plessy2.7k
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Add GenomicRanges to SummarizedExperiment
deseq2 summarizedexperiment granges written 2.5 years ago by s.w.vanderlaan40 • updated 2.1 years ago by WouterDeCoster40k
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Mapping from cDNA coordinates to genomic space
cdna genomicfeatures granges transcript written 2.4 years ago by longoka30 • updated 2.3 years ago by Biostar ♦♦ 20
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warning trying to create a TxDB for S.pombe
txdb chipseeker pombe granges metadata written 2.4 years ago by Lila M 770 • updated 2.4 years ago by ddiez1.8k
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Get upstream and downstream intergenic regions in R
R granges intergenic written 2.7 years ago by greentailedmouse50 • updated 2.7 years ago by ddiez1.8k
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Problems with GRanges promoter list for EnrichedHeatmap
R bioconductor enrichedheatmap chip-seq granges written 3.0 years ago by Anwesha_Ghosh10 • updated 3.0 years ago by zwdzwd120
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GRanges intersect operation
granges written 3.0 years ago by bsmith030465150
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HOWTO extract regions from GRanges object
iranges R genomicranges granges subsetting written 3.5 years ago by Assa Yeroslaviz1.2k • updated 3.5 years ago by geek_y9.8k
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Converting UCSCData Class to GRanges Class
genome R granges written 3.8 years ago by Dimitris Polychronopoulos0 • updated 3.8 years ago by Joseph Pearson450
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Get Gene Location Data
gene R granges human locus written 4.3 years ago by JW10
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how to query biomaRt from a GRanges object
R biomart granges sequencing written 4.4 years ago by sebastianzeki0170 • updated 4.4 years ago by Giovanni M Dall'Olio26k
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about GRAnges and append
granges written 4.6 years ago by Bogdan800
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