Showing: grangesreset
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Clustering coordinates based on window size
iranges R genomicranges granges written 10 weeks ago by user_g20 • updated 10 weeks ago by Alex Reynolds24k
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Detecting Overlaps within Grange Object
R genomicranges granges written 3 months ago by user_g20 • updated 3 months ago by d-cameron1.8k
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Is possible to convert BSgenome object to GRange?
bsgenome granges written 6 months ago by Lila M 380 • updated 6 months ago by Devon Ryan81k
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How to save GRanges object to csv file
export granges written 10 months ago by akij80 • updated 10 months ago by Charles Plessy2.5k
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Add GenomicRanges to SummarizedExperiment
deseq2 summarizedexperiment granges written 18 months ago by s.w.vanderlaan40 • updated 13 months ago by WouterDeCoster30k
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Mapping from cDNA coordinates to genomic space
cdna genomicfeatures granges transcript written 16 months ago by longoka30 • updated 16 months ago by Biostar ♦♦ 20
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warning trying to create a TxDB for S.pombe
txdb chipseeker pombe granges metadata written 16 months ago by Lila M 380 • updated 16 months ago by ddiez1.7k
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Get upstream and downstream intergenic regions in R
R granges intergenic written 21 months ago by greentailedmouse40 • updated 21 months ago by ddiez1.7k
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Problems with GRanges promoter list for EnrichedHeatmap
R bioconductor enrichedheatmap chip-seq granges written 2.0 years ago by Anwesha_Ghosh10 • updated 2.0 years ago by zwdzwd120
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GRanges intersect operation
granges written 2.0 years ago by bsmith03046590
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HOWTO extract regions from GRanges object
iranges R genomicranges granges subsetting written 2.5 years ago by Assa Yeroslaviz1.1k • updated 2.5 years ago by geek_y8.6k
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Converting UCSCData Class to GRanges Class
genome R granges written 2.8 years ago by Dimitris Polychronopoulos0 • updated 2.8 years ago by Joseph Pearson400
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Get Gene Location Data
gene R granges human locus written 3.3 years ago by JW10
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how to query biomaRt from a GRanges object
R biomart granges sequencing written 3.4 years ago by sebastianzeki0110 • updated 3.4 years ago by Giovanni M Dall'Olio26k
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about GRAnges and append
granges written 3.6 years ago by Bogdan530
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about INCLUSIVE intersections of GRanges
granges written 3.6 years ago by Bogdan530
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"for loop" and AUTOPLOT function
ggbio granges written 3.6 years ago by Bogdan530
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Merge duplicate GRanges ranges
R merge granges written 3.9 years ago by ifreecell170 • updated 3.9 years ago by Devon Ryan81k
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cn.mops error - Help !
cn.mops exome-seq r-bioconductor granges written 4.2 years ago by poisonAlien2.5k • updated 4.1 years ago by Biostar ♦♦ 20
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How do I summarize a GRanges data frame into "one complete RLE"?
R genomicranges rle granges written 4.2 years ago by kamaitachi0 • updated 4.2 years ago by Devon Ryan81k
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