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Find mutations that are spatially clustered?
genome clustering granges variants written 17 days ago by Rubal310 • updated 17 days ago by bernatgel2.5k
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GenomicRanges : How to reduce a GRanges by gene
R genomicranges reduce granges written 9 months ago by Nicolas Rosewick8.7k • updated 5 weeks ago by ATpoint31k
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Using NCBI's genomic accession to directly load GRanges in R
ncbi R granges written 7 months ago by guedes.aureliano0 • updated 6 months ago by Biostar ♦♦ 20
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Removing overlaps in GRange function
iranges R granges firebrowse raster written 17 months ago by jmw7300 • updated 17 months ago by zx87549.1k
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Calculate distances between items in different GRanges
R bioconductor granges written 3.2 years ago by igor9.8k • updated 20 months ago by zx87549.1k
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Clustering coordinates based on window size
iranges R genomicranges granges written 23 months ago by user_g20 • updated 23 months ago by Alex Reynolds29k
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Detecting Overlaps within Grange Object
R genomicranges granges written 24 months ago by user_g20 • updated 24 months ago by d-cameron2.1k
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Is possible to convert BSgenome object to GRange?
bsgenome granges written 2.2 years ago by Lila M 810 • updated 2.2 years ago by Devon Ryan94k
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How to save GRanges object to csv file
export granges written 2.6 years ago by akij100 • updated 2.6 years ago by Charles Plessy2.7k
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Add GenomicRanges to SummarizedExperiment
deseq2 summarizedexperiment granges written 3.2 years ago by s.w.vanderlaan40 • updated 2.8 years ago by WouterDeCoster43k
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Mapping from cDNA coordinates to genomic space
cdna genomicfeatures granges transcript written 3.1 years ago by longoka30 • updated 3.0 years ago by Biostar ♦♦ 20
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warning trying to create a TxDB for S.pombe
txdb chipseeker pombe granges metadata written 3.1 years ago by Lila M 810 • updated 3.1 years ago by ddiez1.8k
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Get upstream and downstream intergenic regions in R
R granges intergenic written 3.4 years ago by greentailedmouse50 • updated 3.4 years ago by ddiez1.8k
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Problems with GRanges promoter list for EnrichedHeatmap
R bioconductor enrichedheatmap chip-seq granges written 3.7 years ago by Anwesha_Ghosh10 • updated 3.7 years ago by zwdzwd120
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GRanges intersect operation
granges written 3.7 years ago by bsmith030465150
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HOWTO extract regions from GRanges object
iranges R genomicranges granges subsetting written 4.2 years ago by Assa Yeroslaviz1.3k • updated 4.2 years ago by geek_y10k
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Converting UCSCData Class to GRanges Class
genome R granges written 4.5 years ago by Dimitris Polychronopoulos0 • updated 4.5 years ago by Joseph Pearson450
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