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Recent Replies
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C: Atypical Volcano plot of RNAseq data by
saamar.rajput • 50
Could you identify the reason now?
-
C: Atypical Volcano plot of RNAseq data by
saamar.rajput • 50
More details about the code added!
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C: Is "Attribute Circle Layout" of a protein-protein network standard and acceptabl by
F. Golestan • 20
OK. Many thanks for your useful explanation.
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A: Merge two columns... by
nterhoeven • 80
You can do this with `left_join()` from the `tidyverse` package You should rename the `log2FC` c...
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A: Distribution of mutations in different parts of the genome by
venu ♦ 6.3k
This is called `topography of mutations`. There are not many papers on this aspect of the mutatio...
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A: Gene regulation network analysis mixed with other unrelated events by
tujuchuanli • 50
Thanks a lot for your great help.
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A: show location of amino acid corresponding to SNP in a PDB model by
Emily_Ensembl ♦ 19k
We have this in Ensembl. Search for the variant, then go to 3D protein model. For example [rs699 ...
-
C: How to handle several measurements of the same gene on one DNA microarray? by
froessler • 0
Hi, thanks a lot for your comment, I will consider it. :)
-
C: How to handle several measurements of the same gene on one DNA microarray? by
froessler • 0
Dear Kevin, Thanks a lot for your answer. As I'm currently not only working with microarrays fro...
-
C: scRNA-seq: Kallisto processing of bioproject data (fastq-dump) by
Nicolas Rosewick ♦ 8.1k
ok so I guess that the SRR123_3.fastq.gz is the sequencing barcode ( to multiplex multiple sample...
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A: Extract every CDS sequences from a VCF file by
maxime.policarpo • 80
I found a way to extract the sequences i wanted. For those who wonder how I did : I first extra...
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C: Extract every CDS sequences from a VCF file by
maxime.policarpo • 80
Well this is not very convenient because any indel of the individual mapped to the genome will ca...
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