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How to calculate Polygenic Risk Score from Summary Results with Z-Score only

z-score prs grs polygenic risk score risk score written 3 months ago by AnnaStieber • 0 • updated 9 weeks ago by Sam • 2.2k

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214

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Allelic scoring in PLINK

score grs prs plink written 10 weeks ago by lee.stopak • 10

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2.0k

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Genetic rsisk score, polygenic risk score

grs prs written 3.0 years ago by J.F.Jiang • 750 • updated 17 months ago by bikash.k • 0

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6.0k

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Genetic Risk Score (GRS)/ OR values

gwas grs snp written 4.1 years ago by Juliana • 30 • updated 4.1 years ago by coleman_jonathan • 410

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Recent Replies

C: mRNA.Exp[[page.Counter]] : subscript out of bounds by chetana • 40
Hi, Were you able to fix that error? I've just come across the error and never really used Fireb...
C: Run RepeatMasker problems by xhfeng0307 • 0
Thanks, Sishuo, I will take a look on the post. Not sure could fix it.
C: Run RepeatMasker problems by xhfeng0307 • 0
It seems like I do not have this folder, `~/anaconda3/share/RepeatMasker$ cd RepeatMasker bash: ...
C: How to find a variant in a particular position in a bam file only using samtools by h.mon ♦ 24k
In recent versions, mpileup has been moved from samtools to bcftools, and you don't need the grep...
A: Should I specify exome region to do the QC with qualimap2 for WES analysis? by h.mon ♦ 24k
You should include a bed file with the targets captured by the exome out you used, not the "true"...
C: Y-DNA and mtDNA Haplogroup Predictor by Leon • 10
I have no experience with the method about MToolBox myself.
C: Y-DNA and mtDNA Haplogroup Predictor by moushengxu • 390
Thanks so much for the reply. How about MToolBox?
C: How to find a variant in a particular position in a bam file only using samtools by tw617 • 30
**THANK YOU!** $ samtools mpileup -v -u out.bam | grep "17375390" | cut -f 8 > out.vcf ...
A: How to find a variant in a particular position in a bam file only using samtools by swbarnes2 ♦ 5.0k
Look up how to use samtools mpileup
C: How to find a variant in a particular position in a bam file only using samtools by tw617 • 30
Thanks for the reply but I can already see it in IGV, I need to be able to show it is there using...
A: How to find a variant in a particular position in a bam file only using samtools by h.mon ♦ 24k
Call variants for the region of interest only (`-r chr:from-to`), output vcf, and use the vcf to ...
C: Y-DNA and mtDNA Haplogroup Predictor by Leon • 10
if you want to use vcf file as software input, for mtDNA, I think haplogrep is the most popular c...

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