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<prev • 83 results • page 1 of 3 • next >
2
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259
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Future direction of Gene Set Enrichment Analysis
gene rna-seq gsea written 5 days ago by lmanohara99 • 20
1
vote
1
answer
233
views
1
answer
How to do GSEA from gene profiles obtained from GEO
gene enrichment gsea go written 11 days ago by stewiegriffin • 0
4
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1
answer
209
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1
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GSEA following DESeq2
R deseq2 rna-seq gsea written 18 days ago by sup230 • 10 • updated 18 days ago by geek_y ♦ 7.8k
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0
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121
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0
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GSEA related to other functional analyses
rna-seq gsea goterm written 25 days ago by sup230 • 10
1
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2
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173
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2
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multi-omics data gene set enrichment analysis
R gene set enrichment analysis gsea omics written 4 weeks ago by email2mrna • 0 • updated 4 weeks ago by EagleEye • 4.6k
1
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1
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141
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1
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Scoring scheme in GSEA
gsea written 5 weeks ago by vivien.wee16 • 0 • updated 5 weeks ago by Santosh Anand • 2.9k
1
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1
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193
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1
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General questions about running GSEAPreranked
gseapreranked gsea written 5 weeks ago by mmccarthy781 • 10 • updated 5 weeks ago by Samuel Brady • 230
5
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1
answer
168
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1
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p-values in GSEA
gsea written 5 weeks ago by vivien.wee16 • 0 • updated 5 weeks ago by Giovanni M Dall'Olio ♦ 25k
0
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1
answer
185
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1
answer
How to rank genes prepared for GSEA analysis with TopGO
topgo gsea rna-seq written 7 weeks ago by wangdp123 • 60 • updated 7 weeks ago by kennethcondon2007 • 810
2
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1
answer
211
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1
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Input all the ranked genes into pre-ranked GSEA?
ranked gsea written 8 weeks ago by blairzxy • 20 • updated 7 weeks ago by assaron • 70
0
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1
answer
186
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1
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GSEA produces too few enriched sets
kallisto gsea transcriptome written 9 weeks ago by crimsontabaq • 40 • updated 9 weeks ago by kristoffer.vittingseerup • 210
4
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1
answer
147
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1
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How to perform GSEA analysis with survival phenotype?
gsea survival written 10 weeks ago by blairzxy • 20 • updated 10 weeks ago by Sean Davis ♦ 23k
0
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0
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143
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0
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GSEA signal strength
gsea written 11 weeks ago by Tom_L • 190
2
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0
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144
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0
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Differential analysis of functional enrichments
go gsea written 12 weeks ago by russhh • 2.6k
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2
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353
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5 follow
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GAGE or GSEABase using expression data and pathway.gmt file for mouse
pathway R rna-seq gsea gage written 3 months ago by snishtala03 • 0 • updated 12 weeks ago by bigmawen • 230
4
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2
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244
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2
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GVSA: problem with gene identifier
gvsa rna-seq gsea written 4 months ago by cmgraef • 0 • updated 3 months ago by Biostar ♦♦ 20
0
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1
answer
185
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1
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An enriched gene in GSEA
gsea written 3 months ago by kanwarjag • 750 • updated 3 months ago by h.mon ♦ 8.0k
0
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1
answer
309
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1
answer
How to prepare .gct file for GSEA software?
next-gen gsea sequencing written 5 months ago by zekunmu • 0 • updated 5 months ago by WouterDeCoster ♦ 20k
0
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0
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162
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0
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Help! GSEA with all data (no threshold?)
microarray gsea written 6 months ago by jenna.anderson • 0
0
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1
answer
333
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1
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Alternatives to Gene Set Enrichment Analysis dedicated for single samples
gene set enrichment analysis gsea written 7 months ago by orzech_mag • 140 • updated 7 months ago by sysbiocoder • 150
0
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1
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487
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1
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Design for GSVA - gene set enrichment analysis
enrichment gsva gsea lmfit regression written 7 months ago by mforde84 • 810
0
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2
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440
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2
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GSEA for organisms with no GO terms?
gsea go written 13 months ago by peter pfand • 70 • updated 7 months ago by anne.de.jong • 0
1
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1
answer
258
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1
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K-S null hypothesis for GSEA
gsea written 7 months ago by mubangafchama • 10 • updated 7 months ago by Jean-Karim Heriche ♦ 12k
1
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1
answer
408
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1
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GSEA blue and pink o'gram - how are they plotted?
gsea written 12 months ago by Genosa • 90 • updated 8 months ago by janders8 • 10
0
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2
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414
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2
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GSEA preranked list, values with same rank?
gsea written 9 months ago by janders8 • 10 • updated 9 months ago by tangming2005 • 2.1k
6
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2
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408
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2
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GSEA genesets postiively enriched in positive phenotype are necessarily negatively enriched in the negative phenotype?
gsea written 9 months ago by liu.huand • 0 • updated 9 months ago by fanli.gcb • 600
0
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1
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512
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1
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GSEA for qPCR data
go qpcr gsea written 17 months ago by peter pfand • 70 • updated 10 months ago by Biostar ♦♦ 20
0
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1
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329
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1
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Trimming redundant gene sets after gsea analysis
term reduction gsea go analysis written 10 months ago by fizer • 20 • updated 10 months ago by assaron • 70
1
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0
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489
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0
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GSEA heatmap for all genes?
heat map rna gsea rna-seq written 10 months ago by pat.longjump • 0
6
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1
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423
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1
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Is there an over representation for cancer processes in pathway databases (e.g. IPA) - can this be reasonably adjusted?
pathway enrichment gsea go cancer written 11 months ago by dr.michael.r.barnes • 40 • updated 11 months ago by Dan Gaston ♦ 6.8k
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