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<prev • 122 results • page 1 of 5 • next >
13
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1
answer
2.3k
views
1
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Tool: clusterProfiler: an R package for comparing biological themes among gene clusters
tool kegg clusterprofiler R gsea go written 2.1 years ago by Guangchuang Yu • 1.9k
0
votes
1
answer
143
views
1
answer
Gene Set Enrichment between two dataset
r language gsea rna-seq written 17 days ago by gracie • 0 • updated 16 days ago by ewre • 200
5
votes
2
answers
90
views
7 follow
2
answers
GSEA top genes vs all platform
functional analysis rna-seq gsea written 17 days ago by ra2967 • 10 • updated 17 days ago by Charles Warden ♦ 5.1k
1
vote
1
answer
87
views
1
answer
Pathway test for reversal of effect (three-condition comparison)
camera differential expression gsea rna-seq written 20 days ago by glocke01 • 160 • updated 17 days ago by assaron • 150
0
votes
0
answers
79
views
0
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Why is number of geneset present in MSigDB C2:CP:KEGG geneset different from the original KEGG pathway?
gsea written 28 days ago by mariet1051 • 0
0
votes
2
answers
155
views
2
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Need help in GSEA analysis and interpretation
barcode plot gsea rna-seq written 4 weeks ago by vinayjrao • 100
0
votes
1
answer
131
views
1
answer
GSEA - Calculate the probability of each gene being enriched?
gene module gsea rna-seq statistics written 7 weeks ago by adnbps • 0 • updated 7 weeks ago by vj • 360
1
vote
1
answer
183
views
1
answer
GSEA Phenotype Table Input
gsea written 9 weeks ago by DVA • 470 • updated 8 weeks ago by c.chakraborty • 80
0
votes
1
answer
128
views
1
answer
weird problem with desktop GSEA
rna-seq gsea written 12 weeks ago by anasofiamoreira94 • 30 • updated 12 weeks ago by yueli7 • 40
5
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3
answers
1.6k
views
3
answers
Simplest way to perform GSEA from a weighted list of entrez gene ids
enrichment transcriptomics gsea written 2.1 years ago by rachel.cavill • 20 • updated 3 months ago by pshubhamoy • 20
4
votes
1
answer
740
views
6 follow
1
answer
Interpreting GSEA results
next-gen rna-seq gsea written 8 months ago by Ron • 800 • updated 3 months ago by pshubhamoy • 20
5
votes
1
answer
800
views
1
answer
p-values in GSEA
gsea written 13 months ago by vivien.wee16 • 0 • updated 3 months ago by Biostar ♦♦ 20
0
votes
0
answers
122
views
0
answers
View gene list in GAGE enriched terms
gene ontology gsea gage written 3 months ago by mbk0asis • 360
0
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0
answers
173
views
0
answers
MSigDB gene set enrichment analysis
gene ontology gsea written 4 months ago by dec986 • 110
5
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0
answers
246
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6 follow
0
answers
Tool: MSigDB for Multiple Organisms in a Tidy Data Format
msigdb pathways tool gsea R written 4 months ago by igor ♦ 6.5k
0
votes
1
answer
254
views
1
answer
Deseq2 Differential Expression (9 samples 3 conditions)
deseq2 rna-seq gsea written 4 months ago by bryce.kirby • 0 • updated 4 months ago by h.mon ♦ 18k
3
votes
2
answers
398
views
2
answers
Deseq2 Differentially Expressed Genes between conditions
R deseq2 rna-seq differential expression gsea written 4 months ago by bryce.kirby • 0 • updated 4 months ago by Buffo • 1.1k
4
votes
1
answer
319
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5 follow
1
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GSEA results from RNA-Seq data of different patients are shared! weird!
rna-seq gsea written 4 months ago by Daniel-X • 0
3
votes
1
answer
234
views
1
answer
Is there a name for these charts?
fgsea visualization gsea written 4 months ago by russhh • 3.6k • updated 4 months ago by assaron • 150
4
votes
3
answers
718
views
5 follow
3
answers
How do you compare GSEA results between treatments?
microarray gsea written 8 months ago by shawn.w.foley • 90 • updated 5 months ago by a_liberzon • 0
0
votes
0
answers
273
views
0
answers
GSEA Leading edge analysis error
rnaseq gsea written 5 months ago by sandKings • 10
0
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0
answers
222
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0
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High-quality visualization of GSEA data illustrating relationships between multiple pathways.
figure gsea written 5 months ago by Vincent Laufer • 970
2
votes
1
answer
524
views
1
answer
GSEA preranking metric for RNA Seq
deseq2 rna-seq gsea written 6 months ago by bipin • 0 • updated 6 months ago by Kevin Blighe ♦ 25k
3
votes
1
answer
288
views
1
answer
GSEA: Why is signal2noise suggested only for 3+ samples?
gsea rna-seq written 6 months ago by bipin • 0 • updated 6 months ago by h.mon ♦ 18k
5
votes
3
answers
716
views
5 follow
3
answers
How to handle the 'Inf' and '-Inf' in cufflinks output when use clusterprofiler gseGO
cufflinks gsea clusterprofiler gsego rna-seq written 10 months ago by yaotianran • 0 • updated 6 months ago by garcia.nacho • 0
1
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1
answer
718
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1
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How to do GSEA from gene profiles obtained from GEO
gene enrichment gsea go written 12 months ago by stewiegriffin • 0 • updated 7 months ago by Biostar ♦♦ 20
0
votes
0
answers
430
views
0
answers
GSEA-class file (.cls) parsing error message
gsea written 7 months ago by snguyen268 • 0
1
vote
1
answer
780
views
1
answer
DESeq2 followed by GSEA
gene R next-gen rna-seq gsea written 7 months ago by langya • 20 • updated 7 months ago by Ram • 110
5
votes
3
answers
2.5k
views
3
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difference between GSEA and Gene Ontology
gene ontology gsea rna-seq written 2.1 years ago by GHanumanth404 • 10 • updated 8 months ago by gabriel.rosser • 120
1
vote
1
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420
views
1
answer
KEGG pathways and modules
annotation kegg gsea kegg modules written 8 months ago by amborella • 0 • updated 8 months ago by EagleEye ♦ 5.6k
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