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<prev • 133 results • page 1 of 5 • next >
3
votes
2
answers
1.2k
views
2
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GSEA with variant proportions as input
variant proportions input gsea written 3.2 years ago by manali.rupji • 0 • updated 3 days ago by Biostar ♦♦ 20
4
votes
2
answers
124
views
2
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Gene set enrichment analysis with logFC and PValue
R gene expression rna-seq gsea genesetenrichment written 4 days ago by Bioinfo • 270 • updated 4 days ago by sangram_keshari • 50
1
vote
0
answers
80
views
0
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Why all NES values are >0.5
rna-seq gsea written 17 days ago by gregoire.destreel • 10 • updated 10 days ago by Biostar ♦♦ 20
3
votes
1
answer
160
views
6 follow
1
answer
Gene set enrichment analysis
enrichment gsa gsea R written 12 days ago by Bogdan • 660 • updated 12 days ago by zx8754 ♦ 5.4k
2
votes
1
answer
119
views
1
answer
GSEA on single-cell cluster data
single-cell R gsea written 17 days ago by roy.granit • 740 • updated 16 days ago by igor ♦ 6.8k
0
votes
1
answer
83
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1
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extract gseaResult in clusterprofiler
clusterprofiler gsea written 26 days ago by sugus • 20 • updated 24 days ago by Guangchuang Yu • 2.0k
5
votes
2
answers
178
views
2
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Gene set enrichment analysis with edgeR output
R edger genesetenrichment gsea rna-seq written 24 days ago by Biologist • 80 • updated 24 days ago by h.mon ♦ 20k
4
votes
1
answer
111
views
5 follow
1
answer
Performing GSEA using MSigDB gene sets in R
msigdb R gsea written 24 days ago by wilsonav • 10 • updated 24 days ago by igor ♦ 6.8k
22
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0
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3.8k
views
0
answers
Tool: Plotting GSEA output in R
javagsea plot tool rna-seq gsea written 2.2 years ago by t.kuilman • 690
1
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0
answers
169
views
0
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Normal to have high variability in Broad Institute's GSEA Output?
gsea go written 5 weeks ago by Kristin Muench • 310
0
votes
1
answer
195
views
1
answer
GSEA results change in clusterProfiler
clusterprofiler gsea written 6 weeks ago by sugus • 20 • updated 6 weeks ago by Guangchuang Yu • 2.0k
2
votes
2
answers
231
views
5 follow
2
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GSEA, input metrics
gsea rna-seq written 8 weeks ago by g.e.novakovsky • 20 • updated 8 weeks ago by shawn.w.foley • 110
0
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0
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151
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0
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How to customized CpGlist or Genelist in chAMP.gsea
gsea champ written 8 weeks ago by sugus • 20
13
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1
answer
2.5k
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1
answer
Tool: clusterProfiler: an R package for comparing biological themes among gene clusters
tool kegg clusterprofiler R gsea go written 2.3 years ago by Guangchuang Yu • 2.0k
0
votes
1
answer
263
views
1
answer
Gene Set Enrichment between two dataset
r language gsea rna-seq written 11 weeks ago by gracie • 0 • updated 11 weeks ago by ewre • 210
5
votes
2
answers
142
views
7 follow
2
answers
GSEA top genes vs all platform
functional analysis rna-seq gsea written 11 weeks ago by ra2967 • 10 • updated 11 weeks ago by Charles Warden ♦ 5.5k
2
votes
1
answer
140
views
1
answer
Pathway test for reversal of effect (three-condition comparison)
camera differential expression gsea rna-seq written 12 weeks ago by glocke01 • 160 • updated 11 weeks ago by assaron • 170
0
votes
0
answers
118
views
0
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Why is number of geneset present in MSigDB C2:CP:KEGG geneset different from the original KEGG pathway?
gsea written 3 months ago by mariet1051 • 0
0
votes
2
answers
219
views
2
answers
Need help in GSEA analysis and interpretation
barcode plot gsea rna-seq written 3 months ago by vinayjrao • 100
0
votes
1
answer
179
views
1
answer
GSEA - Calculate the probability of each gene being enriched?
gene module gsea rna-seq statistics written 3 months ago by adnbps • 0 • updated 3 months ago by vj • 370
1
vote
1
answer
257
views
1
answer
GSEA Phenotype Table Input
gsea written 4 months ago by DVA • 480 • updated 4 months ago by c.chakraborty • 90
0
votes
1
answer
174
views
1
answer
weird problem with desktop GSEA
rna-seq gsea written 4 months ago by anasofiamoreira94 • 30 • updated 4 months ago by yueli7 • 40
5
votes
3
answers
1.8k
views
3
answers
Simplest way to perform GSEA from a weighted list of entrez gene ids
enrichment transcriptomics gsea written 2.3 years ago by rachel.cavill • 20 • updated 5 months ago by pshubhamoy • 20
4
votes
1
answer
962
views
6 follow
1
answer
Interpreting GSEA results
next-gen rna-seq gsea written 10 months ago by Ron • 820 • updated 5 months ago by pshubhamoy • 20
5
votes
1
answer
918
views
1
answer
p-values in GSEA
gsea written 15 months ago by vivien.wee16 • 0 • updated 5 months ago by Biostar ♦♦ 20
0
votes
0
answers
160
views
0
answers
View gene list in GAGE enriched terms
gene ontology gsea gage written 5 months ago by mbk0asis • 380
0
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0
answers
215
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0
answers
MSigDB gene set enrichment analysis
gene ontology gsea written 6 months ago by dec986 • 130
5
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0
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349
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6 follow
0
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Tool: MSigDB for Multiple Organisms in a Tidy Data Format
msigdb pathways tool gsea R written 6 months ago by igor ♦ 6.8k
0
votes
1
answer
337
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1
answer
Deseq2 Differential Expression (9 samples 3 conditions)
deseq2 rna-seq gsea written 6 months ago by bryce.kirby • 0 • updated 6 months ago by h.mon ♦ 20k
3
votes
2
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507
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2
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Deseq2 Differentially Expressed Genes between conditions
R deseq2 rna-seq differential expression gsea written 6 months ago by bryce.kirby • 0 • updated 6 months ago by Buffo • 1.2k
<prev • 133 results • page 1 of 5 • next >
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