Showing: gseareset
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GSEA leading edge analysis fails
rnaseq gsea written 4 days ago by sandKings10
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GSEA preranking metric for RNA Seq
deseq2 rna-seq gsea written 12 days ago by bipin.nalvakha0 • updated 11 days ago by Kevin Blighe13k
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GSEA: Why is signal2noise suggested only for 3+ samples?
gsea rna-seq written 18 days ago by bipin.nalvakha0 • updated 17 days ago by h.mon11k
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How to do GSEA from gene profiles obtained from GEO
gene enrichment gsea go written 6 months ago by stewiegriffin0 • updated 6 weeks ago by Biostar ♦♦ 20
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DESeq2 followed by GSEA
gene R next-gen rna-seq gsea written 7 weeks ago by langya0 • updated 7 weeks ago by Ram110
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Interpreting GSEA results
next-gen rna-seq gsea written 10 weeks ago by Ron690 • updated 10 weeks ago by abbey30
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difference between GSEA and Gene Ontology
gene ontology gsea rna-seq written 19 months ago by GHanumanth4040 • updated 10 weeks ago by gabriel.rosser100
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KEGG pathways and modules
annotation kegg gsea kegg modules written 11 weeks ago by amborella0 • updated 11 weeks ago by EagleEye4.9k
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Linking patient survival to gene-set analysis
tcga gsea survival rna-seq written 3 months ago by mattkarikomi0 • updated 12 weeks ago by Kevin Blighe13k
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How do you compare GSEA results between treatments?
microarray gsea written 3 months ago by shawn.w.foley60 • updated 12 weeks ago by Kevin Blighe13k
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Cut-off for genesets in GSEA
gsea written 3 months ago by Shamim Sarhadi190 • updated 3 months ago by assaron110
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GSEA Preranking algorithms
preranking gsea rna-seq written 3 months ago by Doom10
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Doing GSEA analysis on a set of genes
enrichment rna-seq gsea written 3 months ago by chahatupretiiitk40 • updated 3 months ago by EagleEye4.9k
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Gene Set Enrichment Analysis after DESeq2
geneontology deseq2 rna-seq gsea written 4 months ago by Sreeraj Thamban80 • updated 4 months ago by prakash100
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GSVA enrichment score and heatmap
ssgsea R gsva gsea written 4 months ago by steve.booth10 • updated 4 months ago by Kevin Blighe13k
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Gene sets associated with neurological functioning?
msigdb gene sets psychiatric genetics gsea written 4 months ago by Ellen O0 • updated 4 months ago by Alex Reynolds22k
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How can we calculate expression value from raw data
sequence rna-seq gsea written 5 months ago by lmanohara9920 • updated 5 months ago by Michael Dondrup43k
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GSEA related to other functional analyses
rna-seq gsea goterm written 7 months ago by sup23030 • updated 5 months ago by Biostar ♦♦ 20
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Tool: Plotting GSEA output in R
javagsea plot tool rna-seq gsea written 18 months ago by t.kuilman370
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GSEA following DESeq2
R deseq2 rna-seq gsea written 6 months ago by sup23030 • updated 6 months ago by geek_y8.2k
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