Showing: gseareset
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GSVA enrichment score and heatmap
ssgsea R gsva gsea written 5 days ago by steve.booth10 • updated 5 days ago by Kevin Blighe3.0k
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How can we calculate expression value from raw data
sequence rna-seq gsea written 23 days ago by lmanohara9920 • updated 23 days ago by Michael Dondrup43k
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GSEA related to other functional analyses
rna-seq gsea goterm written 11 weeks ago by sup23020 • updated 24 days ago by Biostar ♦♦ 20
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Tool: Plotting GSEA output in R
javagsea plot tool rna-seq gsea written 14 months ago by t.kuilman340
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GSEA following DESeq2
R deseq2 rna-seq gsea written 10 weeks ago by sup23020 • updated 10 weeks ago by geek_y8.0k
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multi-omics data gene set enrichment analysis
R gene set enrichment analysis gsea omics written 3 months ago by email2mrna0 • updated 3 months ago by EagleEye4.7k
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Scoring scheme in GSEA
gsea written 3 months ago by vivien.wee160 • updated 3 months ago by Santosh Anand3.0k
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General questions about running GSEAPreranked
gseapreranked gsea written 3 months ago by mmccarthy78110 • updated 3 months ago by Samuel Brady230
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p-values in GSEA
gsea written 3 months ago by vivien.wee160 • updated 3 months ago by Giovanni M Dall'Olio25k
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How to rank genes prepared for GSEA analysis with TopGO
topgo gsea rna-seq written 3 months ago by wangdp12360 • updated 3 months ago by kennethcondon2007840
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Input all the ranked genes into pre-ranked GSEA?
ranked gsea written 3 months ago by blairzxy20 • updated 3 months ago by assaron70
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GSEA produces too few enriched sets
kallisto gsea transcriptome written 4 months ago by crimsontabaq40 • updated 4 months ago by kristoffer.vittingseerup290
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How to perform GSEA analysis with survival phenotype?
gsea survival written 4 months ago by blairzxy20 • updated 4 months ago by Sean Davis23k
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GSEA signal strength
gsea written 4 months ago by Tom_L210
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GAGE or GSEABase using expression data and pathway.gmt file for mouse
pathway R rna-seq gsea gage written 5 months ago by snishtala030 • updated 4 months ago by bigmawen230
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GVSA: problem with gene identifier
gvsa rna-seq gsea written 6 months ago by cmgraef0 • updated 5 months ago by Biostar ♦♦ 20
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An enriched gene in GSEA
gsea written 5 months ago by kanwarjag790 • updated 5 months ago by h.mon9.0k
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How to prepare .gct file for GSEA software?
next-gen gsea sequencing written 7 months ago by zekunmu0 • updated 7 months ago by WouterDeCoster22k
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GSEA for organisms with no GO terms?
gsea go written 15 months ago by peter pfand70 • updated 9 months ago by anne.de.jong0
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K-S null hypothesis for GSEA
gsea written 9 months ago by mubangafchama10 • updated 9 months ago by Jean-Karim Heriche13k
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