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<prev • 141 results • page 1 of 5 • next >
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Enrichr : how to provide background as gene symbols or int ?
gene microarray rna-seq gsea written 4 days ago by rf • 100
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131
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Estimating gene set enrichment using Fishers exact test
fisherstest rna-seq gsea lncrna written 14 days ago by Biologist • 130
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104
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5 follow
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How to perform GSEAPreranked analysis in a proper manner?
gsea written 20 days ago by Deepak Tanwar • 3.9k • updated 20 days ago by mikhael.manurung • 0
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2
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269
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5 follow
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Pathway analysis and Gene enrichment Analysis Queries
rnaseq enrichment score pathway analysis gsea written 11 weeks ago by bioinforesearchquestions • 200 • updated 11 weeks ago by dz2353 • 50
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1
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259
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1
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In GSEA, how can one "correlate" gene expression with categorical phenotype data?
pearson genes correlation gsea expression written 3 months ago by O.rka • 70 • updated 3 months ago by Kevin Blighe ♦ 37k
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199
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Run GSEA with custom gene sets?
gene enrichment differential-abundance custom gsea written 3 months ago by O.rka • 70 • updated 3 months ago by h.mon ♦ 23k
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4.4k
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10 follow
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Gene Set Enrichment Analysis after DESeq2
geneontology deseq2 rna-seq gsea written 16 months ago by Sreeraj Thamban • 120 • updated 3 months ago by enxxx23 • 210
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239
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5 follow
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Add RPKM values together for multiple different genes?
rpkm rna-seq gsea written 3 months ago by tpham2654 • 0 • updated 3 months ago by Michael Dondrup ♦ 45k
2
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1
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228
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1
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Differentially expressed genes data sets for download
geo dataset differentially expressed genes gsea written 4 months ago by Mk • 10 • updated 4 months ago by Istvan Albert ♦♦ 79k
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GSEA with variant proportions as input
variant proportions input gsea written 3.5 years ago by manali.rupji • 0 • updated 4 months ago by Biostar ♦♦ 20
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2
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355
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2
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Gene set enrichment analysis with logFC and PValue
R gene expression rna-seq gsea genesetenrichment written 4 months ago by Vasu • 300 • updated 4 months ago by sangram_keshari • 120
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Why all NES values are >0.5
rna-seq gsea written 4 months ago by gregoire.destreel • 10 • updated 4 months ago by Biostar ♦♦ 20
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373
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6 follow
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Gene set enrichment analysis
enrichment gsa gsea R written 4 months ago by Bogdan • 700 • updated 4 months ago by zx8754 ♦ 6.5k
2
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1
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654
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1
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GSEA on single-cell cluster data
single-cell R gsea written 4 months ago by roy.granit • 770 • updated 4 months ago by igor ♦ 7.3k
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1
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217
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1
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extract gseaResult in clusterprofiler
clusterprofiler gsea written 4 months ago by sugus • 30 • updated 4 months ago by Guangchuang Yu • 2.1k
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2
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491
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8 follow
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Gene set enrichment analysis with edgeR output
R edger genesetenrichment gsea rna-seq written 4 months ago by Biologist • 130 • updated 4 months ago by h.mon ♦ 23k
4
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1
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450
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5 follow
1
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Performing GSEA using MSigDB gene sets in R
msigdb R gsea written 4 months ago by wilsonav • 10 • updated 4 months ago by igor ♦ 7.3k
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4.7k
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Tool: Plotting GSEA output in R
javagsea plot tool rna-seq gsea written 2.5 years ago by t.kuilman • 720
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304
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Normal to have high variability in Broad Institute's GSEA Output?
gsea go written 5 months ago by Kristin Muench • 350
1
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1
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438
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5 follow
1
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GSEA results change in clusterProfiler
clusterprofiler gsea written 5 months ago by sugus • 30 • updated 5 months ago by Guangchuang Yu • 2.1k
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466
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5 follow
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GSEA, input metrics
gsea rna-seq written 6 months ago by g.e.novakovsky • 20 • updated 6 months ago by shawn.w.foley • 190
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301
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How to customized CpGlist or Genelist in chAMP.gsea
gsea champ written 6 months ago by sugus • 30
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1
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2.9k
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1
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Tool: clusterProfiler: an R package for comparing biological themes among gene clusters
tool kegg clusterprofiler R gsea go written 2.6 years ago by Guangchuang Yu • 2.1k
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1
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460
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1
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Gene Set Enrichment between two dataset
r language gsea rna-seq written 6 months ago by gracie • 0 • updated 6 months ago by ewre • 210
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2
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254
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7 follow
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GSEA top genes vs all platform
functional analysis rna-seq gsea written 6 months ago by ra2967 • 10 • updated 6 months ago by Charles Warden ♦ 6.1k
2
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1
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227
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1
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Pathway test for reversal of effect (three-condition comparison)
camera differential expression gsea rna-seq written 6 months ago by glocke01 • 160 • updated 6 months ago by assaron • 170
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176
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Why is number of geneset present in MSigDB C2:CP:KEGG geneset different from the original KEGG pathway?
gsea written 7 months ago by mariet1051 • 0
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2
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323
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2
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Need help in GSEA analysis and interpretation
barcode plot gsea rna-seq written 7 months ago by vinayjrao • 110
0
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1
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263
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1
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GSEA - Calculate the probability of each gene being enriched?
gene module gsea rna-seq statistics written 7 months ago by adnbps • 0 • updated 7 months ago by vj • 390
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1
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383
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1
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GSEA Phenotype Table Input
gsea written 8 months ago by DVA • 490 • updated 8 months ago by c.chakraborty • 110
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