Showing: gtfreset
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Convert gff.gz file to gtf
gtf gff rna-seq written 2 hours ago by akh54050
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99
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2
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90
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1
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115
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Extracting sequence and annotation of a particular gene
gtf annotation written 4 weeks ago by Adrian Pelin2.3k • updated 4 weeks ago by ATpoint15k
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2
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5 follow
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How to subset a bed or gtf file to some genes of interest?
gtf bed gene genome written 4.0 years ago by cyril-cros890 • updated 6 weeks ago by dimitrischat60
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153
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GTF from consensus sequence
gtf fasta gff written 7 weeks ago by lfiedlerc10
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1
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672
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1
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same transcript id with STAR quant mode
gtf star rna-seq written 17 months ago by grant.hovhannisyan1.5k • updated 12 weeks ago by manuel.belmadani730
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238
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197
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Homer annotatePeaks.pl custom GTF
gtf homer atac-seq written 3 months ago by Lucy0
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195
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1
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Add double qoutes around transcript_id in gtf file
gtf stringtie rna-seq awk written 3 months ago by BioBaby0 • updated 3 months ago by finswimmer11k
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193
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346
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what is the easiest/fastest way to convert from BAM to GTF
gtf bam written 6 months ago by Sam100 • updated 4 months ago by Biostar ♦♦ 20
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12 follow
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Transform a GTF file into a data frame in R
gtf data frame annotation file rna-seq annotation written 19 months ago by cristian220 • updated 5 months ago by Biostar ♦♦ 20
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518
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hisat2 and RSEM pipeline
software error gtf rna-seq rsem hisat2 written 5 months ago by Shahzad10 • updated 5 months ago by EagleEye6.2k
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2
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284
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no gene_id for tRNA in GFF3
gff3 annotation gtf written 6 months ago by prasundutta87330
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285
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1
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Where to find a valid GTF file for stringtie asssembly?
gtf stringtie transcriptome written 6 months ago by Vijay Lakhujani4.0k • updated 6 months ago by Damian Kao15k
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1.5k
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How to rename chromosome names in GTF file?
gtf fasta annotation genome written 19 months ago by cristian220 • updated 7 months ago by Biostar ♦♦ 20
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GFF3 to GTF
gtf gff written 3.2 years ago by silas00880 • updated 7 months ago by RamRS21k
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2
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446
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2
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1
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534
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1
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Converting fasta to gtf using reference genome
fasta gtf conversion written 8 months ago by KI0 • updated 8 months ago by h.mon24k
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1
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469
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1
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1.1k
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problem with using gtf file in cufflinks in Galaxy
gtf fpkm cufflinks rna-seq written 3.0 years ago by nazaninhoseinkhan360 • updated 8 months ago by Biostar ♦♦ 20
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8
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9.5k
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extract only geneID and gene symbol from GTF file
genome gtf python written 4.0 years ago by catherine12243110 • updated 8 months ago by Minstein70
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1
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340
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Create a GTF file from mapped reads
genome gtf saf written 8 months ago by JulianC10 • updated 8 months ago by grant.hovhannisyan1.5k
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372
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1
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the track part of UCSC table browser
table browser gtf rna-seq ucsc written 10 months ago by mikysyc201630 • updated 8 months ago by Denise - Open Targets4.9k
3
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1
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847
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1
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Convert gff3 to gtf with R or shell
gff3 R ngs shell gtf written 8 months ago by bioinfo8120
1
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1
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396
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1
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1
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1
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315
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1
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some questions on GFF3
gtf annotation gff written 8 months ago by prasundutta87330
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1
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478
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1
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