Showing: gtfreset
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Gene feature information missing in Stringtie merged assembly
gtf assembly rna-seq written 7 weeks ago by waqaskhokhar99960 • updated 7 weeks ago by Juke-342.5k
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1
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161
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bedtools slop set start to -1
gtf bed slop bedtools written 8 weeks ago by Medhat8.4k • updated 8 weeks ago by Alex Reynolds28k
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GTF file in Ensembl database for RNA-Seq analysis
gtf rna-seq written 4 months ago by wangdp123160 • updated 4 months ago by Benn7.5k
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180
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220
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Extracting sequence and annotation of a particular gene
gtf annotation written 5 months ago by Adrian Pelin2.3k • updated 5 months ago by ATpoint21k
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5 follow
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How to subset a bed or gtf file to some genes of interest?
gtf bed gene genome written 4.4 years ago by cyril-cros890 • updated 5 months ago by dimitrischat70
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255
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GTF from consensus sequence
gtf fasta gff written 5 months ago by lfiedlerc10
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1
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805
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same transcript id with STAR quant mode
gtf star rna-seq written 21 months ago by grant.hovhannisyan1.7k • updated 6 months ago by manuel.belmadani1.1k
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Homer annotatePeaks.pl custom GTF
gtf homer atac-seq written 7 months ago by Lucy0
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286
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Add double qoutes around transcript_id in gtf file
gtf stringtie rna-seq awk written 8 months ago by BioBaby10 • updated 8 months ago by finswimmer12k
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what is the easiest/fastest way to convert from BAM to GTF
gtf bam written 10 months ago by Sam120 • updated 8 months ago by Biostar ♦♦ 20
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Transform a GTF file into a data frame in R
gtf data frame annotation file rna-seq annotation written 23 months ago by cristian230 • updated 9 months ago by Biostar ♦♦ 20
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hisat2 and RSEM pipeline
software error gtf rna-seq rsem hisat2 written 9 months ago by Shahzad10 • updated 9 months ago by EagleEye6.4k
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no gene_id for tRNA in GFF3
gff3 annotation gtf written 10 months ago by prasundutta87340
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522
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1
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Where to find a valid GTF file for stringtie asssembly?
gtf stringtie transcriptome written 10 months ago by lakhujanivijay4.3k • updated 10 months ago by Damian Kao15k
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How to rename chromosome names in GTF file?
gtf fasta annotation genome written 23 months ago by cristian230 • updated 11 months ago by Biostar ♦♦ 20
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GFF3 to GTF
gtf gff written 3.5 years ago by silas008100 • updated 11 months ago by RamRS23k
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Converting fasta to gtf using reference genome
fasta gtf conversion written 12 months ago by KI0 • updated 12 months ago by h.mon27k
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problem with using gtf file in cufflinks in Galaxy
gtf fpkm cufflinks rna-seq written 3.3 years ago by nazaninhoseinkhan360 • updated 12 months ago by Biostar ♦♦ 20
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8
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8
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extract only geneID and gene symbol from GTF file
genome gtf python written 4.3 years ago by catherine12243120 • updated 12 months ago by Minstein110
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