Showing selected topics • reset
<prev • 296 results • page 1 of 10 • next >
1
vote
1
answer
106
views
1
answer
editing gtf file
gtf gee edit written 18 days ago by dieunelderilus10 • updated 16 days ago by Jorge Amigo12k
2
votes
0
answers
325
views
0
answers
Tool: Extend 3' UTR of a GTF file
gtf annotation tool rna-seq python written 3 months ago by Shred230
0
votes
0
answers
105
views
0
answers
1
vote
3
answers
169
views
3
answers
Is there any tool/API available to convert GTF/GFF to JSON format?
gtf ncbi gff json ensembl written 6 weeks ago by lakhujanivijay5.3k • updated 5 weeks ago by vkkodali2.4k
0
votes
1
answer
165
views
1
answer
How to get transcript ID and tpm from the gtf files of ballgown outputs?
gtf ballgown hisat2 rna-seq awk written 6 weeks ago by newbie90 • updated 6 weeks ago by _r_am32k
1
vote
1
answer
171
views
1
answer
1
vote
0
answers
201
views
0
answers
1
vote
1
answer
167
views
1
answer
How to extract required lines of particular chromosome from a gtf file?
gtf command rna-seq linux written 10 weeks ago by Biologist190 • updated 10 weeks ago by _r_am32k
0
votes
0
answers
137
views
0
answers
0
votes
0
answers
119
views
0
answers
40
votes
4
answers
7.3k
views
9 follow
4
answers
How To Get Gene Regions +3Kb Upstream
gtf ucsc written 8.3 years ago by Stephen2.7k • updated 12 weeks ago by Biostar ♦♦ 20
1
vote
1
answer
135
views
1
answer
htseq-count without GTF?
htseq count fpkm htseq-count gtf written 3 months ago by blur150 • updated 3 months ago by ATpoint44k
40
votes
4
answers
12k
views
17 follow
4
answers
Transform a GTF file into a data frame in R
gtf data frame annotation file rna-seq annotation written 3.4 years ago by cristian260 • updated 3 months ago by D. Puthier330
7
votes
3
answers
407
views
6 follow
3
answers
Please help : How to deal with 'Missing gene_name' of GTF file?
gtf drop-seq rna-seq written 4 months ago by tofukaj10 • updated 3 months ago by Juke344.9k
0
votes
0
answers
173
views
0
answers
3
votes
1
answer
527
views
1
answer
Convert .gbff (gene bank flat format) to gff3, gtf
genome gtf gff genebank gbff written 4 months ago by alex0 • updated 4 months ago by Juke344.9k
5
votes
2
answers
425
views
5 follow
2
answers
TSS metaprofile using Deeptools
gtf deeptools computematrix metaprofile written 5 months ago by mickey_9530 • updated 5 months ago by zhuobaowen10
0
votes
1
answer
1.9k
views
1
answer
2
votes
0
answers
369
views
0
answers
0
votes
0
answers
212
views
0
answers
2
votes
0
answers
398
views
0
answers
Tutorial: Sorting GFF/GTF files
gtf gff sort annotation forum tutorial written 6 months ago by Juke344.9k
0
votes
0
answers
158
views
0
answers
Tool to merge two GTFs
gtf R written 6 months ago by manninm0
0
votes
0
answers
188
views
0
answers
1
vote
2
answers
2.6k
views
2
answers
2
votes
0
answers
3.2k
views
0
answers
Calculating Fpkm/Rpkm For Each Read Group Given A Gtf File
gtf rpkm fpkm rna-seq written 6.8 years ago by Nathan S. Watson-Haigh200 • updated 6 months ago by Biostar ♦♦ 20
2
votes
1
answer
5.2k
views
1
answer
How to run HISAT2 / Stringtie / Ballgown analysis starting with gff file
gtf gff stringtie hisat2 written 4.1 years ago by al-ash150 • updated 6 months ago by Biostar ♦♦ 20
0
votes
0
answers
133
views
0
answers
1
vote
1
answer
156
views
1
answer
Genome vs. Transcriptome Annotation
gtf annotation rna-seq written 7 months ago by arussell348320 • updated 7 months ago by _r_am32k
5
votes
1
answer
273
views
1
answer
2
votes
0
answers
331
views
0
answers
<prev • 296 results • page 1 of 10 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1897 users visited in the last hour
_