Showing: gtfreset
<prev • 240 results • page 1 of 8 • next >
11
votes
2
answers
3.9k
views
5 follow
2
answers
How to subset a bed or gtf file to some genes of interest?
gtf bed gene genome written 3.9 years ago by cyril-cros870 • updated 10 days ago by dimitrischat60
1
vote
0
answers
109
views
0
answers
GTF from consensus sequence
gtf fasta gff written 13 days ago by lfiedlerc10
0
votes
1
answer
612
views
1
answer
same transcript id with STAR quant mode
gtf star rna-seq written 15 months ago by grant.hovhannisyan1.4k • updated 6 weeks ago by manuel.belmadani570
1
vote
0
answers
169
views
0
answers
1
vote
0
answers
146
views
0
answers
1
vote
1
answer
160
views
1
answer
Add double qoutes around transcript_id in gtf file
gtf stringtie rna-seq awk written 11 weeks ago by BioBaby0 • updated 11 weeks ago by finswimmer11k
0
votes
0
answers
160
views
0
answers
4
votes
0
answers
299
views
0
answers
what is the easiest/fastest way to convert from BAM to GTF
gtf bam written 5 months ago by Sam100 • updated 3 months ago by Biostar ♦♦ 20
26
votes
3
answers
4.1k
views
12 follow
3
answers
Transform a GTF file into a data frame in R
gtf data frame annotation file rna-seq annotation written 18 months ago by cristian200 • updated 4 months ago by Biostar ♦♦ 20
0
votes
1
answer
414
views
1
answer
hisat2 and RSEM pipeline
software error gtf rna-seq rsem hisat2 written 4 months ago by Shahzad10 • updated 4 months ago by EagleEye6.2k
3
votes
2
answers
239
views
2
answers
no gene_id for tRNA in GFF3
gff3 annotation gtf written 4 months ago by prasundutta87330
0
votes
1
answer
237
views
1
answer
Where to find a valid GTF file for stringtie asssembly?
gtf stringtie transcriptome written 5 months ago by bioExplorer3.7k • updated 5 months ago by Damian Kao15k
7
votes
1
answer
1.3k
views
1
answer
How to rename chromosome names in GTF file?
gtf fasta annotation genome written 18 months ago by cristian200 • updated 5 months ago by Biostar ♦♦ 20
0
votes
1
answer
3.5k
views
1
answer
GFF3 to GTF
gtf gff written 3.1 years ago by silas00880 • updated 6 months ago by RamRS20k
1
vote
2
answers
412
views
2
answers
0
votes
1
answer
446
views
1
answer
Converting fasta to gtf using reference genome
fasta gtf conversion written 6 months ago by KI0 • updated 6 months ago by h.mon24k
8
votes
1
answer
414
views
1
answer
2
votes
2
answers
1.0k
views
2
answers
problem with using gtf file in cufflinks in Galaxy
gtf fpkm cufflinks rna-seq written 2.9 years ago by nazaninhoseinkhan360 • updated 6 months ago by Biostar ♦♦ 20
15
votes
8
answers
9.1k
views
8
answers
extract only geneID and gene symbol from GTF file
genome gtf python written 3.9 years ago by catherine12243110 • updated 6 months ago by Minstein70
0
votes
0
answers
538
views
0
answers
1
vote
1
answer
300
views
1
answer
Create a GTF file from mapped reads
genome gtf saf written 6 months ago by JulianC10 • updated 6 months ago by grant.hovhannisyan1.4k
0
votes
1
answer
338
views
1
answer
the track part of UCSC table browser
table browser gtf rna-seq ucsc written 9 months ago by mikysyc201630 • updated 7 months ago by Denise - Open Targets4.8k
3
votes
1
answer
703
views
1
answer
Convert gff3 to gtf with R or shell
gff3 R ngs shell gtf written 7 months ago by bioinfo8120
1
vote
1
answer
341
views
1
answer
1
vote
1
answer
277
views
1
answer
some questions on GFF3
gtf annotation gff written 7 months ago by prasundutta87330
1
vote
1
answer
423
views
1
answer
0
votes
1
answer
335
views
1
answer
gffread error when converting gff to gtf
gtf software error gff gffread written 7 months ago by LucasK0 • updated 7 months ago by Jeffin Rockey1.0k
3
votes
1
answer
466
views
1
answer
How to represent trans-spliced genes in GTF?
gtf file-format trans-splicing written 21 months ago by Dan500 • updated 7 months ago by Biostar ♦♦ 20
4
votes
2
answers
5.2k
views
2
answers
STAR genome index with and/or with out *.gtf annotation
gtf alignment star rna-seq bowtie written 2.8 years ago by kirannbishwa01950 • updated 7 months ago by drskm70
4
votes
1
answer
304
views
1
answer
Why a gene name have more than one ensembl ID in gtf?
gtf ensembl written 8 months ago by walker10 • updated 8 months ago by Emily_Ensembl17k
<prev • 240 results • page 1 of 8 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1949 users visited in the last hour