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GATK GenomicsDBImport intervals
gatk gvcf written 7 weeks ago by MAPK1.6k
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VCF - does mother or father come first in the comma separated ALT
vcf heterozygous gvcf written 13 months ago by syntax60 • updated 9 months ago by Biostar ♦♦ 20
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How to get vcf not from g.vcf?
vcf gvcf written 12 months ago by woojoy140 • updated 12 months ago by Pierre Lindenbaum129k
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gVCF what is a "break-end replacement"
gvcf written 13 months ago by syntax60
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how to extract unique variants from GVCF
gatk variant-calling filtering gvcf written 2.0 years ago by harold.smith.tarheel4.6k • updated 2.0 years ago by Pierre Lindenbaum129k
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Problem parsing interval list file to GenomicsDBImport in GATK4
gatk parsing interval gvcf written 2.7 years ago by Yatros20 • updated 2.3 years ago by prnsml0
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2
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1.6k
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Extract SNPs by position from gvcf
extract position snp gvcf written 2.4 years ago by wangdavid75820 • updated 2.4 years ago by Pierre Lindenbaum129k
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How to visualize gVCF?
gvcf written 3.4 years ago by Annika Forsingdal210
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Filreing vcf files not giving any results
vcflib vcftools gvcf written 3.5 years ago by abdulbenissa10 • updated 3.5 years ago by willgilks300
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Merging consecutive non-variant calls
vcf gatk gvcftools gvcf written 3.9 years ago by gmcinnes0 • updated 3.9 years ago by Chris Saunders180
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Get gVCF file from genome coordinates
gvcf coorinates hg19 written 4.0 years ago by Paul1.4k • updated 4.0 years ago by WouterDeCoster44k
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gVCF files from 1000 Genomes samples
1000 genomes gvcf written 4.2 years ago by donfreed1.5k • updated 4.2 years ago by QVINTVS_FABIVS_MAXIMVS2.4k
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Combine multiple vcf (or gVCF) from Ion Torrent
iontorrent snp gvcf written 4.6 years ago by pavlidisp0 • updated 4.6 years ago by Jorge Amigo11k
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1.6k
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gVCF files into Plink!
plink gvcf written 4.7 years ago by francisco.caminaceballos20
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gVCF from VCF and BAM
gvcf written 5.2 years ago by tejaswikoganti60 • updated 5.2 years ago by Ying W4.0k
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Block break from gVCF files
gvcf written 5.4 years ago by win840 • updated 5.4 years ago by rbagnall1.6k
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GATK for gVCF compilation issue
gatk gvcf written 5.6 years ago by win840
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2.6k
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Per chromosome gVCF
gatk gvcf written 5.6 years ago by win840 • updated 5.6 years ago by David W4.8k
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