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2
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1
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92
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1
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genomic inflation factor and how to use it to estimate adjusted P-values in GWAS?
lambda gwas written 4 days ago by Ana • 120 • updated 3 days ago by Fabio Marroni • 1.9k
1
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0
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50
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Where To Get The Genetic Map For The Haplotype Reference Consortium to phase the data externally using SHAPEIT software with family information
genome gwas shapeit phasing hrc written 4 days ago by moldach • 90
10
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0
answers
603
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0
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Minor allele frequency
alleles gwas snps written 23 months ago by alessandrotestori7 • 310 • updated 6 days ago by Biostar ♦♦ 20
8
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1
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109
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6 follow
1
answer
GWAS data analysis strategy or pipeline
exom-array gwas snp-array written 9 days ago by Shicheng Guo • 7.1k
1
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0
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75
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0
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Interpretation of Tassel MLM output
genome gwas snp written 8 days ago by Denis • 30
0
votes
1
answer
84
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1
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Convert association data from gwas catalog to vcf format
vcf gwas gwas-catalog snp written 10 days ago by hsiaoyi0504 • 30 • updated 9 days ago by Pierre Lindenbaum ♦ 114k
7
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3
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284
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3
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What is the best and latest package/software for post-processing of Hi-C (Chromosome Conformation Capture)?
gene R next-gen hic gwas written 7 months ago by jamespower • 30 • updated 18 days ago by afli • 140
1
vote
1
answer
152
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1
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SNP coordinates for all genome builds
gwas snp written 27 days ago by muraved • 10 • updated 21 days ago by Brice Sarver • 2.5k
0
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0
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43
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0
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How to map GWAS-Catalog traits to Human tissue origins
gwas tissue human written 21 days ago by Shicheng Guo • 7.1k
2
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0
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126
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0
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FarmCPU - how to explain the reported 'effect'?
gwas written 22 days ago by Philipp Bayer ♦ 5.7k
0
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0
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88
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0
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NCBI Remap Issue
genome gwas remapping vcftools snp written 22 days ago by f.abbondanza94 • 0
4
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1
answer
241
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5 follow
1
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Why main diagonal of gemma relatedness matrix is not equal to 1
gwas relatedness matrix kinship matrix gemma written 11 weeks ago by Johan Zicola • 30 • updated 23 days ago by sgalla32 • 30
0
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0
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123
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0
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GWAS or QTL mapping for arabidopsis quantitative traits?
qtl gwas arabidopsis written 24 days ago by joshsteiner5 • 0
5
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1
answer
152
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1
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GWAS in Plink - phenotype file format
gwas snps plink phenotype written 4 weeks ago by SGMS • 50 • updated 4 weeks ago by zx8754 ♦ 5.7k
0
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0
answers
94
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0
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binary tp nucleotide convertion
nucleotide gwas binary snp written 4 weeks ago by bulbul • 10
0
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0
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161
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0
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How to validate SNP if NCBI Genome remapping service as failed
gwas plink snp R written 8 weeks ago by Leonida Monaco • 20 • updated 4 weeks ago by Biostar ♦♦ 20
1
vote
0
answers
137
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0
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conversion binary to ATGC
gwas snp written 5 weeks ago by bulbul • 10 • updated 5 weeks ago by Vijay Lakhujani ♦ 3.2k
0
votes
0
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186
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0
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Job: Biostatistician I position at Ronald M. Loeb center for Alzheimer's disease
gwas genome job snp R rna-seq written 5 weeks ago by kapoor.manav • 40
0
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0
answers
72
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0
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phenotypic variance explained by non-additive model in GenABEL
gwas non-additive model written 6 weeks ago by kumar.vinod81 • 280
0
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0
answers
117
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0
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furious-luke/lizards-are-awesome package for ubuntu
gwas python docker linux written 7 weeks ago by bulbul • 10
11
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4
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2.2k
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4
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Bacterial GWAS analysis?
genome gwas bacteria association written 3.5 years ago by SemiQuant • 50 • updated 7 weeks ago by predeus • 690
4
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1
answer
169
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1
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Why quantitative design are preferred GWAS approach
qtl gwas statistical analysis written 9 weeks ago by ste.lu • 20 • updated 8 weeks ago by Kevin Blighe ♦ 32k
2
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1
answer
198
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1
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How is imputation r2 calculated in minimac3?
imputation minimac3 gwas written 8 weeks ago by cityofwisdom • 10 • updated 8 weeks ago by zx8754 ♦ 5.7k
20
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3
answers
1.4k
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3
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Gwas Peak In Only One Population, Why?
gwas population association written 7.5 years ago by Sally • 30 • updated 9 weeks ago by Biostar ♦♦ 20
1
vote
1
answer
2.9k
views
1
answer
Q-Q plots with GWAS p-values using R (needs confidence band)
q-q plots R gwas written 2.7 years ago by joshf • 20 • updated 9 weeks ago by Kevin Blighe ♦ 32k
2
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2
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3.0k
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2
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Generating .ped and .map files from .dose.vcf.gz files
gwas open imputation written 2.7 years ago by Diego.Morales • 10 • updated 9 weeks ago by RamRS ♦ 19k
2
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1
answer
948
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1
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Paper for Plink LD clumping 'greedy algorithm'
gwas greedy plink ld clumping written 22 months ago by Lou • 10 • updated 10 weeks ago by Biostar ♦♦ 20
0
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0
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162
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0
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GWAS for ordinal data? Quantitative trait with lots of "zero" values....
gwas quantitative trait ordinal bimodal regression written 10 weeks ago by fletchkatie • 0
1
vote
1
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282
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1
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PRSice: Imputation and clumping
prsice gwas polygenic risk score snp written 3 months ago by muraved • 10 • updated 10 weeks ago by Sam • 2.2k
35
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10
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20k
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18 follow
10
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Get All The Genes In A Pathway (E.G. Kegg)
pathway gwas kegg gene written 7.4 years ago by Stephen ♦ 2.6k • updated 10 weeks ago by RamRS ♦ 19k
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