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How to analyse GWAS data for co-morbid disorders?
pleiotropy gwas statistical genetics snp R written 6 weeks ago by Veera • 60 • updated 10 days ago by Biostar ♦♦ 20
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Is it possible to use haplotypes instead of SNPs for association testing with phenotypes?
haplotypes gwas snp written 12 days ago by William • 3.9k • updated 12 days ago by GabrielMontenegro • 330
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Where and how to fetch phenotype data of the relevant SRA-identified tuberculosis WGS samples?
software sra association gwas written 13 days ago by bioinform • 20 • updated 13 days ago by Istvan Albert ♦♦ 73k
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Annotation of GWAS results with GTEx
gwas snp eqtl gtex written 5 weeks ago by LNA • 10 • updated 24 days ago by alioniya • 0
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Convert numeric alleles into letters
gwas rehh shapeit2 written 6 months ago by Gennady Khvorykh • 20 • updated 24 days ago by manay • 10
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News: The power and promise of Genome-Wide Association Studies
gwas news meta-analysis R ngs linux written 25 days ago by carlopecoraro2 • 500
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how to GWAS of characters with normal distribution?
gwas normal distribution association chracter written 25 days ago by nuketbilgen • 30 • updated 25 days ago by GabrielMontenegro • 330
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What platform similar to Galaxy can handle multiple batch processing of bacterial genomes, mutation profiling and GWAS?
galaxy gwas platform parallel mutation profiling written 26 days ago by bioinform • 20 • updated 26 days ago by colindaven • 260
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Gemma linear mixed model analysis with second grm format
software error gemma gsl gwas written 26 days ago by dp0b • 20
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News: "Practical GWAS Using Linux and R" Workshop
R news next-gen linux gwas written 27 days ago by carlopecoraro2 • 500
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what software is a proper one for the GWAS of the tuberculosis?
software gwas tuberculosis written 27 days ago by bioinform • 20
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GWAS, eigenvec in R
eigenvec r program gwas written 27 days ago by whateverer • 0
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How to compare genotype calls of the SNPS on chrom X for the GWAS samples between plink file vs Affymetrix genotype output file?
gwas affymetrix plink ped genotype written 6 weeks ago by bioinforesearchquestions • 80 • updated 4 weeks ago by Biostar ♦♦ 20
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How to perform permutations in GWAS
permutation gwas genotype written 5 weeks ago by Tark • 20 • updated 5 weeks ago by Istvan Albert ♦♦ 73k
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conditinoal association analysis from summary statistics
gwas conditional association analysis written 5 weeks ago by alessandrotestori7 • 170
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converting very small p-values into chi-squared statistics with python
p-value python chi-squared upper tail gwas written 5 weeks ago by yorgos.athanasiadis • 20
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Job: BIOINFORMATICIAN I at Brigham and Women's Hospital, Boston, USA
gwas R job snp rna-seq written 6 weeks ago by IV • 1.1k
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Determining the subjects to use after obtaining a PC plot of population substructure
gwas population stratification best practices written 7 weeks ago by Sheila • 170
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135
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Genomic inflation in genome-wide survival analysis
gwas inflation gif survival genomic written 7 weeks ago by Caragh • 30
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Understanding typical GWAS versus clinvar studies
gwas clinvar written 8 weeks ago by andrewl • 10
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"Core Dumped" when using GEMMA for GWAS
gemma bugwas gwas written 3 months ago by amandinette • 10 • updated 8 weeks ago by r.harrington • 20
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Merge several association signals in a region and use as a phenotype
gwas riskscore written 9 weeks ago by Floris Brenk • 790 • updated 8 weeks ago by Biostar ♦♦ 20
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Looking for software to run a multivariate linear mixed model GWAS on a Principal Component Analysis with a bimodal distribution
gwas pca snp written 8 weeks ago by r.harrington • 20
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association analysis with stratification
gwas population stratification written 9 weeks ago by alessandrotestori7 • 170 • updated 8 weeks ago by theobroma22 • 890
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ELI5: Why is population structure considered a fixed effect in mixed linear models?
gwas mlm written 11 months ago by Jeremy Leipzig ♦ 17k • updated 10 weeks ago by theobroma22 • 890
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Do imputed variants tend to show weaker, stronger, or the same average association compared to genotyped variants
imputation genotyped snp gwas written 10 weeks ago by Vincent Laufer • 870
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Compare positions of GWAS SNPs to peaks called in MACs
macs gwas catalog position snp written 11 weeks ago by cmharro • 0
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merge cases and controls with plink
gwas plink written 11 weeks ago by alessandrotestori7 • 170 • updated 11 weeks ago by chrchang523 • 2.5k
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In GWAS Studies, how to understand "97 SNPs explain 2.7% of BMI"?
gwas written 12 weeks ago by Tao • 110 • updated 12 weeks ago by Philipp Bayer ♦ 4.6k
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Merging files in plink
gwas plink snp written 3 months ago by Tears • 0
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