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Why different reference panels change the signal for a SNP?
hapmap hrc imputation referencepanel written 4 months ago by anamaria • 140 • updated 4 months ago by curious • 470
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1
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512
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1
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QTCAT Quantitative Trait Cluster Association Test problem with reading SNP data
hapmap gwas gapit qtcat written 20 months ago by tauseef.kiani • 0 • updated 12 months ago by BioRyder • 180
1
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1
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405
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transmitted and untransmitted alleles
hapmap haplotype snp phasing written 14 months ago by yh362 • 30 • updated 14 months ago by Kevin Blighe ♦ 69k
3
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1
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222
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1
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Phased genotypes data per population
hapmap population genotypes written 15 months ago by nastasia • 10 • updated 15 months ago by Kevin Blighe ♦ 69k
10
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1
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1
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PCA using HapMap population data
hapmap vcf pca genotype written 4.9 years ago by eze.anokian • 10 • updated 20 months ago by zx8754 ♦ 9.9k
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1
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3.6k
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12 follow
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How to predict individual ethnicity information by using hapmap data
hapmap ethnicity snp written 2.9 years ago by Joe • 40 • updated 21 months ago by Biostar ♦♦ 20
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0
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Haploview cannot connect to HapMap Database
hapmap genome haplotypes haploview gwas written 22 months ago by novice_bioinformatician • 0
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0
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Hapmap to vcf
vcf hapmap convert written 2.3 years ago by shinken123 • 100 • updated 2.3 years ago by _r_am ♦ 32k
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0
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2.3k
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How can get MAF for set of SNPs from each population based on 1000 Genome?
hapmap R ucsc 1000 genome ensembl written 4.9 years ago by star • 270 • updated 2.3 years ago by zx8754 ♦ 9.9k
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2
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2.0k
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2
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Popgenome R package
hapmap popgenome snp written 2.6 years ago by yp • 10
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1
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1.9k
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1
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I need help to download some SNP data from HapMap
hapmap public-databases tag snp data-download snp written 2.6 years ago by williamtenoriotenorio • 0 • updated 2.6 years ago by Kevin Blighe ♦ 69k
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1
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Does Hapmap2 Have Overlap With 1Kg?
hapmap genome written 9.4 years ago by Ardmore • 140 • updated 2.9 years ago by Biostar ♦♦ 20
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Phasing without a reference panel
hapmap population genotype phasing written 2.9 years ago by chadapohn.chaosrikul • 0 • updated 2.9 years ago by Wietje • 220
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745
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Illumina genotyped the HapMap populations on the MetaboChip
hapmap population genetics written 3.2 years ago by always_learning • 1.1k
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1
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1
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Which SNP database for Chinese Han SNP frequency?
hapmap snp written 4.8 years ago by sinorenjianyi • 40 • updated 3.3 years ago by davmlaw • 90
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1
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Convert Affymetrix Data In Hapmap Format To Plink
hapmap plink affymetrix written 8.5 years ago by charleyfarley • 0 • updated 3.6 years ago by paulotyama • 0
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2.9k
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0
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SNP Proxy dataset
genome ensembl hapmap snp written 3.6 years ago by robust1308 • 0
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2
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5 follow
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Relation Between Hapmap Project And 1000Genomes Project
hapmap genome imputation sequencing written 8.9 years ago by Matthew • 60 • updated 3.8 years ago by Mitch Lokey • 40
58
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5
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21 follow
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Getting Allele Frequencies From 1000 Genomes
genome hapmap ucsc maf ensembl written 9.8 years ago by Stephen ♦ 2.7k • updated 3.9 years ago by Isaac Joseph • 120
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Obtaining a list of SNPs that do not vary in different populations
maf hapmap plink written 4.2 years ago by HumeMarx • 20
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How to phase my genome from FamilyTreeDNA to haplotypes
hapmap familytreedna snphap phasing beagle written 4.2 years ago by alexey.minko • 0
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1
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2.0k
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1
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How Do Plink And Hapmap Files Differ?
hapmap bioinformatics plink written 7.6 years ago by nathanielostrer • 10 • updated 4.3 years ago by Biostar ♦♦ 20
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How to use the 1000Genomes data (hapmap data) to select tag-SNPs in HaploView?
hapmap 1000genomes snp written 4.5 years ago by psycolt2011 • 0 • updated 4.3 years ago by Biostar ♦♦ 20
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Creating a haplotype map now that the HapMap site has been taken down
hapmap written 4.4 years ago by djv4 • 0 • updated 4.4 years ago by Biostar ♦♦ 20
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2
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1.4k
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2
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Different Maf, 1000 genomes versus Hapmap
maf 1000 genomes hapmap snp written 4.5 years ago by avari • 100 • updated 4.5 years ago by Emily_Ensembl ♦ 21k
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0
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933
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Blog: Finding HapMap Variation Data in Ensembl
hapmap ensembl variation blog written 4.6 years ago by Ben_Ensembl • 1.6k
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HapMap in VCF format
hapmap written 4.6 years ago by win • 860 • updated 4.6 years ago by andrew.j.skelton73 ♦ 6.1k
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Is there a recombination map for the HapMap populations that were studied?
hapmap written 4.7 years ago by Paul • 30
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Is there a parent-child SNP genotyping data available somewhere?
hapmap 1000genomes chb snp chs written 4.7 years ago by sinorenjianyi • 40
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How can I get a list of all SNPs from a gene of my interest?
gene ncbi hapmap snp written 4.9 years ago by Mahan • 70 • updated 4.9 years ago by Ibrahim Tanyalcin • 1.1k
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