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119 results • Page
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3
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123
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Herald:
The Biostar Herald for Monday, March 25, 2024
herald
3 days ago by
Biostar
2.6k
3
votes
0
replies
161
views
Herald:
The Biostar Herald for Monday, March 11, 2024
herald
17 days ago by
Biostar
2.6k
4
votes
0
replies
246
views
Herald:
The Biostar Herald for Monday, February 26, 2024
herald
4 weeks ago by
Biostar
2.6k
1
vote
0
replies
183
views
Herald:
The Biostar Herald for Tuesday, February 20, 2024
herald
5 weeks ago by
Biostar
2.6k
2
votes
0
replies
208
views
Herald:
The Biostar Herald for Monday, February 12, 2024
herald
6 weeks ago by
Biostar
2.6k
1
vote
0
replies
232
views
Herald:
The Biostar Herald for Wednesday, January 31, 2024
herald
8 weeks ago by
Biostar
2.6k
3
votes
0
replies
252
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Herald:
The Biostar Herald for Monday, January 22, 2024
herald
9 weeks ago by
Biostar
2.6k
1
vote
0
replies
234
views
Herald:
The Biostar Herald for Monday, January 15, 2024
herald
10 weeks ago by
Biostar
2.6k
2
votes
0
replies
268
views
Herald:
The Biostar Herald for Monday, January 08, 2024
herald
11 weeks ago by
Biostar
2.6k
2
votes
1
reply
394
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Herald:
The Biostar Herald for Tuesday, December 19, 2023
herald
updated 3 months ago by
cmdcolin
★ 3.7k • written 3 months ago by
Biostar
2.6k
4
votes
0
replies
312
views
Herald:
The Biostar Herald for Monday, December 11, 2023
herald
3 months ago by
Biostar
2.6k
2
votes
0
replies
315
views
Herald:
The Biostar Herald for Monday, December 04, 2023
herald
3 months ago by
Biostar
2.6k
3
votes
0
replies
331
views
Herald:
The Biostar Herald for Monday, November 27, 2023
herald
4 months ago by
Biostar
2.6k
3
votes
0
replies
357
views
Herald:
The Biostar Herald for Monday, November 20, 2023
herald
4 months ago by
Biostar
2.6k
3
votes
0
replies
344
views
Herald:
The Biostar Herald for Monday, November 13, 2023
herald
4 months ago by
Biostar
2.6k
4
votes
0
replies
362
views
Herald:
The Biostar Herald for Monday, November 06, 2023
herald
4 months ago by
Biostar
2.6k
2
votes
0
replies
395
views
Herald:
The Biostar Herald for Monday, October 30, 2023
herald
5 months ago by
Biostar
2.6k
2
votes
0
replies
436
views
Herald:
The Biostar Herald for Monday, October 23, 2023
herald
5 months ago by
Biostar
2.6k
3
votes
0
replies
410
views
Herald:
The Biostar Herald for Monday, October 16, 2023
herald
5 months ago by
Biostar
2.6k
4
votes
1
reply
505
views
Herald:
The Biostar Herald for Monday, October 09, 2023
herald
written 5 months ago by
Biostar
2.6k
3
votes
0
replies
448
views
Herald:
The Biostar Herald for Tuesday, September 26, 2023
herald
6 months ago by
Biostar
2.6k
4
votes
0
replies
499
views
Herald:
The Biostar Herald for Wednesday, September 20, 2023
herald
6 months ago by
Biostar
2.6k
4
votes
0
replies
450
views
Herald:
The Biostar Herald for Wednesday, September 06, 2023
herald
6 months ago by
Biostar
2.6k
4
votes
1
reply
695
views
Herald:
The Biostar Herald for Monday, August 28, 2023
herald
updated 7 months ago by
Jesse
▴ 740 • written 7 months ago by
Biostar
2.6k
1
vote
0
replies
549
views
Herald:
The Biostar Herald for Thursday, August 24, 2023
herald
7 months ago by
Biostar
2.6k
2
votes
0
replies
642
views
Herald:
The Biostar Herald for Wednesday, August 09, 2023
herald
7 months ago by
Biostar
2.6k
1
vote
0
replies
742
views
Herald:
The Biostar Herald for Wednesday, August 02, 2023
herald
7 months ago by
Biostar
2.6k
2
votes
0
replies
1.0k
views
Herald:
The Biostar Herald for Thursday, June 15, 2023
herald
9 months ago by
Biostar
2.6k
2
votes
0
replies
736
views
Herald:
The Biostar Herald for Monday, June 05, 2023
herald
9 months ago by
Biostar
2.6k
1
vote
0
replies
814
views
Herald:
The Biostar Herald for Tuesday, May 23, 2023
herald
10 months ago by
Biostar
2.6k
3
votes
0
replies
801
views
Herald:
The Biostar Herald for Thursday, May 11, 2023
herald
10 months ago by
Biostar
2.6k
5
votes
1
reply
792
views
Herald:
The Biostar Herald for Monday, May 01, 2023
herald
updated 11 months ago by
cmdcolin
★ 3.7k • written 11 months ago by
Biostar
2.6k
2
votes
0
replies
693
views
Herald:
The Biostar Herald for Monday, April 24, 2023
herald
11 months ago by
Biostar
2.6k
1
vote
0
replies
687
views
Herald:
The Biostar Herald for Monday, April 17, 2023
herald
11 months ago by
Biostar
2.6k
3
votes
0
replies
725
views
Herald:
The Biostar Herald for Monday, April 10, 2023
herald
11 months ago by
Biostar
2.6k
5
votes
0
replies
623
views
Herald:
The Biostar Herald for Monday, April 03, 2023
herald
12 months ago by
Biostar
2.6k
2
votes
0
replies
614
views
Herald:
The Biostar Herald for Tuesday, March 28, 2023
herald
12 months ago by
Biostar
2.6k
2
votes
0
replies
675
views
Herald:
The Biostar Herald for Monday, March 13, 2023
herald
12 months ago by
Biostar
2.6k
2
votes
0
replies
633
views
Herald:
The Biostar Herald for Tuesday, February 28, 2023
herald
13 months ago by
Biostar
2.6k
2
votes
0
replies
664
views
Herald:
The Biostar Herald for Monday, February 20, 2023
herald
13 months ago by
Biostar
2.6k
1
vote
0
replies
678
views
Herald:
The Biostar Herald for Wednesday, February 15, 2023
herald
13 months ago by
Biostar
2.6k
2
votes
0
replies
681
views
Herald:
The Biostar Herald for Monday, February 06, 2023
herald
13 months ago by
Biostar
2.6k
3
votes
0
replies
598
views
Herald:
The Biostar Herald for Monday, January 30, 2023
herald
14 months ago by
Biostar
2.6k
1
vote
0
replies
565
views
Herald:
The Biostar Herald for Monday, January 23, 2023
herald
14 months ago by
Biostar
2.6k
2
votes
1
reply
761
views
Herald:
The Biostar Herald for Monday, January 16, 2023
herald
updated 14 months ago by
seidel
11k • written 14 months ago by
Biostar
2.6k
2
votes
0
replies
628
views
Herald:
The Biostar Herald for Monday, January 09, 2023
herald
14 months ago by
Biostar
2.6k
3
votes
0
replies
687
views
Herald:
The Biostar Herald for Monday, January 02, 2023
herald
15 months ago by
Biostar
2.6k
3
votes
1
reply
870
views
Herald:
The Biostar Herald for Tuesday, December 27, 2022
herald
updated 15 months ago by
LChart
3.9k • written 15 months ago by
Biostar
2.6k
3
votes
0
replies
659
views
Herald:
The Biostar Herald for Monday, December 19, 2022
herald
15 months ago by
Biostar
2.6k
2
votes
0
replies
516
views
Herald:
The Biostar Herald for Monday, December 12, 2022
herald
15 months ago by
Biostar
2.6k
119 results • Page
1 of 3
Recent Votes
How can two contradicted gene sets be enriched in a cancer sample in GSEA analysis?
Comment: Only one read per run - Trying to use CellRangerv7
Comment: Interproscan taking so much time
Answer: Interproscan taking so much time
Comment: Volcano Plot Output Inquiry: Graphs Facing Down
A: Crispr-cas9 screen analysis mageck
A: Crispr-cas9 screen analysis mageck
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Recent Awards •
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Commentator
to
Devon Ryan
104k
Popular Question
to
amitpande74
▴ 20
Scholar
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Pierre Lindenbaum
160k
Popular Question
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beacamara
• 0
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blur
▴ 280
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ATpoint
81k
Teacher
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Haci
▴ 550
Recent Replies
Comment: FindAllMarkers not working (Error (data layers are not joined. Please run JoinL
by
Nitin
• 0
I did ran the "JoinLayers()" even then it is not working, here is the output before and after DefaultAssay(combined1) <- 'RNA' c…
Comment: FindAllMarkers not working (Error (data layers are not joined. Please run JoinL
by
Nitin
• 0
I tried that too. It did not work.
Comment: (sc)RNA-seq dataset for these cell lines: HEK293, HeLa, PC3 and U2OS
by
GenoMax
140k
Try SRA-explorer with search terms you want. Guide here: https://www.biostars.org/p/366721/ Check these portals: https://singlecell.broad…
Comment: Issue with making local BLAST database
by
Begonia_pavonina
▴ 140
Thank you @genomax, if I have well understood the `retmax` parameter and 10000 entries limitation are linked to the R package, and not to t…
Comment: Nanopore data filtering using fastp
by
emilydolivo97
• 0
thank you , this is my code : import sys import os import subprocess class FastpFiltering: def __init__(self, input_folder, fastp_ou…
Comment: Nanopore data filtering using fastp
by
GenoMax
140k
You can also use `reformat.sh` from [**BBMap suite**][1]. Look at sampling options. [1]: https://sourceforge.net/projects/bbmap/
Comment: calculate mismatch rate from VCF file
by
Pierre Lindenbaum
160k
> I was using it but the output file was too big pipe the output
Comment: Nanopore data filtering using fastp
by
dthorbur
★ 1.7k
Share code and an example please.
Comment: calculate mismatch rate from VCF file
by
Dora
▴ 10
I was using it but the output file was too big, so that I thought the vcf file was more efficient. But now I know that I can stop working o…
Comment: Interproscan taking so much time
by
Mohamed Abderrahmane
▴ 10
Thank you for your reply. I have just executed the computation with parallelization as you mentioned, and I will observe the differences. H…
Comment: struggle to get fasta files from ucsc goldenPath
by
Lila M
★ 1.2k
Of course ... But as 'expected' the range `range=chr8:127794533-128101253` in the output sequence file belongs to: LF385466, LF385467, MA62…
Comment: struggle to get fasta files from ucsc goldenPath
by
GenoMax
140k
Can you select the output format as sequence instead of BED?
Comment: struggle to get fasta files from ucsc goldenPath
by
Lila M
★ 1.2k
Could you please elaborate how to retrieve the sequences directly from the table browser? Thanks!
Comment: struggle to get fasta files from ucsc goldenPath
by
GenoMax
140k
If coordinates in your BED file refer to chromosomal locations then you need to use the whole genome file and get those sections by the met…
Comment: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
by
Istvan Albert
100k
maybe it would work better to ask the OP to post their question as a new one and delete this answer after, if you delete the post they ca…
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