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Heterogeneity from bulk ChIP-seq or ATAC-seq data

heterogeneity chip-seq atac-seq clustering written 10 months ago by msimmer92 • 260 • updated 10 months ago by jared.andrews07 ♦ 7.2k

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249

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Single Sample Tumour/Neoantigen Heterogeneity/Clonal Analysis & Phylogenetic Trees

phylogeny neoantigen heterogeneity genomics cancer written 11 months ago by TLOA3 • 0

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377

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Tools that make mutation based phylogenetic tree figure

phylogenetic heterogeneity written 17 months ago by CY • 550

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337

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Intra-tumor Heterogeneity / Mutation Cellular Fraction in TCGA Data

heterogeneity tcga written 20 months ago by Noushin N • 580

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521

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Techniques for finding tumor purity from Oncomine panel?

heterogeneity oncomine oncology purity written 23 months ago by taylor.falk3 • 0

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3.1k

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How to make this kind of 3-D plotting for cancer subclones ? (picture attached)

heterogeneity subclone cancer written 6.4 years ago by newDNASeqer • 700 • updated 3.9 years ago by Biostar ♦♦ 20

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1.3k

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Definition and formula of methylation heterogeneity

heterogeneity methylation written 4.4 years ago by Shicheng Guo • 8.3k

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1.4k

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general question about "intra tumor heterogeneity"

heterogeneity cancer type written 5.8 years ago by imagineyd • 70 • updated 5.8 years ago by a.polo88 • 110

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1.3k

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tumor heterogeneity target capture

heterogeneity tumor target capture sequencing written 6.3 years ago by cristinam09 • 20 • updated 6.1 years ago by Biostar ♦♦ 20

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Recent Replies

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I think it was poly-A indeed (I still don't know for certain, to be honest). [Here's][1] the GC c...
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I have always known Trinity as de-novo transcriptome assembler.
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If your RNA was prepared by poly-A capture/enrichment then an AT bias can exist. What does the GC...
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