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heterogeneity • reset4
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written 4.6 years ago by
newDNASeqer • 620
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2.1 years ago by
Biostar ♦♦ 20
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written 4.5 years ago by
cristinam09 • 20
• updated
4.4 years ago by
Biostar ♦♦ 20
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Recent Replies
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A: Using Taxonomizr to Call Bacterial Taxonomy From CSV File by
sherrillmix • 0
Sorry I don't really follow biostars (feel free to leave a GitHub issue if you have any further p...
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C: Clarification of OMA tree metrics by
samche42 • 0
Thank you!! i really appreciate the help :)
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C: How to download raw data in batch from NCBI based on Series Accession number or by
Istvan Albert ♦♦ 78k
There is an XML file that contains all the information that is displayed, though getting the data...
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C: How to write the output in snakefile (snakemake) for bowtie2-build by
IP • 500
-A fai file is a index on the fasta file with the format specified [here][1] -Bowtie2 output is ...
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A: Common SNPs among all populations by
Pierre Lindenbaum ♦ 115k
using **vcffilterjdk** http://lindenb.github.io/jvarkit/VcfFilterJdk.html an example with 3 popu...
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A: How to calculate connectivity score for a compound in connectivity map O2? by
krassowski.michal • 20
For anyone else interested: Here is a link to documentation of connectivity scores for the old C...
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C: Filtering HmmScan Domain Results by
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After some test, my command line : hmmscan --cpu 20 --domtblout PFAM_filtered.out -E 1e-23 ...
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A: Does .sra.cache file means failed download? by
ATpoint ♦ 11k
The cache files are downloaded by default, see e.g. [here][1]. You can (and should IMHO) disable ...
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C: Common SNPs among all populations by
Bastien Hervé • 2.7k
In the first link you have different tools, as [vcf-isec][1] > Creates intersections and comp...
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C: Common SNPs among all populations by
mostafarafiepour • 60
Many thanks for your reply, I saw the page you shared. And the only thing I can find is the opti...
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C: Common SNPs among all populations by
Bastien Hervé • 2.7k
Take a look at [VCFtools][1] [Usage guide][2] [1]: https://vcftools.github.io/index.html [...
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Hi Kevin thanks for all the advice. I learned a lot of different ways to input data into wgcna. I...
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