Showing: hisatreset
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Hisat2 with many files
hisat alignment written 21 days ago by Molinia0
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How splice-aware aligner (RNA-Seq) deal with long gap (intron) penalty
hisat tophat alignment star rna-seq written 8 weeks ago by CY420 • updated 4 weeks ago by Biostar ♦♦ 20
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HISAT index with ERCC
ercc hisat alignment rna-seq written 3 months ago by n.lu30 • updated 12 weeks ago by Biostar ♦♦ 20
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Interpreting Hisat2 alignment output
hisat alignment rna-seq written 12 weeks ago by caranlove0 • updated 12 weeks ago by lakhujanivijay4.5k
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CIGAR and sequence length are inconsistent after HISAT alignment
rnaseq hisat alignment written 12 months ago by DVA530 • updated 12 months ago by Devon Ryan92k
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Bayesian algorithm / HISAT & STAR
hisat written 15 months ago by vincentpailler100 • updated 15 months ago by Rob3.6k
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HISAT index incomplete even with HUGE RAM
hisat index indexing written 21 months ago by emcc10 • updated 21 months ago by Devon Ryan92k
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What GTF file should I use in htseq?
htseq hisat rna-seq polyester written 23 months ago by statfa520 • updated 23 months ago by genomax74k
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Bowtie2/HISAT using single-end to generate FPKM???
bowtie2 fpkm hisat rna-seq rpkm written 2.5 years ago by jamieson.pierce30 • updated 2.5 years ago by Brian Bushnell16k
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HISAT2 error running both --dta and --min and --max-intronlen
hisat rna-seq hisat2 written 2.5 years ago by GLFR0 • updated 2.5 years ago by lakhujanivijay4.5k
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junctions.bed file in hisat2
hisat splicing alignment pipeline written 2.7 years ago by badribio240 • updated 2.7 years ago by EagleEye6.5k
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Run mutltiple Fastq files on Hisat2
rnaseq hisat hisat2 written 3.0 years ago by V170 • updated 3.0 years ago by Jorge Amigo11k
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Local Galaxy: Need help with HISAT index builder
local galaxy hisat index builder written 3.3 years ago by thefirstrealace30 • updated 3.3 years ago by Devon Ryan92k
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Cuffquant errors after using HISAT2
hisat cufflinks cuffquant rna-seq hisat2 written 3.4 years ago by ilikebing200050 • updated 3.4 years ago by ablanchetcohen1.2k
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How to remove non-unique mapping reads with Hisat?
hisat alignment rna-seq written 4.4 years ago by Niek De Klein2.5k • updated 3.5 years ago by bimbam420
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