Showing: hisat2reset
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hisat2 run gave 0% alignment
alignment rna-seq hisat2 written 5 weeks ago by vinayjrao60 • updated 5 weeks ago by Satyajeet Khare1.0k
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Forum: Stranger Things: unexpected limitations of popular tools
forum samtools errors hisat2 written 10 weeks ago by Istvan Albert ♦♦ 73k • updated 9 weeks ago by dariober8.0k
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Mapping onto the Transcriptome, RNA-seq
transcriptome rna-seq bowtie hisat2 written 10 weeks ago by asyndeton1710 • updated 10 weeks ago by Rob2.1k
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HISAT2 rna-strandness option
rna-seq hisat2 written 10 weeks ago by cpak198130 • updated 10 weeks ago by Antonio R. Franco3.4k
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Hisat2 versus Bowtie2
bowtie2 exome-sequencing hisat2 written 16 months ago by nalpas.nicolas20 • updated 10 weeks ago by Biostar ♦♦ 20
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HISAT2: does the parameter -k 1 means unique mapping?
hisat2 written 11 weeks ago by biolab950 • updated 11 weeks ago by WouterDeCoster21k
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How many index files will be generated from hisat2-build
hisat2 rna-seq index written 3 months ago by Xiaokang ZH20 • updated 3 months ago by Devon Ryan70k
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hisat2 parameters tuning to match tophat2 parameters
parameters tophat2 rna-seq hisat2 written 3 months ago by pierre.ortalo0 • updated 3 months ago by Istvan Albert ♦♦ 73k
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Strand-option in hisat2
rna-seq strand hisat2 written 3 months ago by vm.higareda0
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Could not locate a HISAT2 index to basename
rna-seq hisat2 written 3 months ago by oolongoni0 • updated 3 months ago by Vijay Lakhujani1.2k
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Mapping RNA-Seq data on genome from another species
genome hisat2 star rna-seq mapping written 4 months ago by tlorin170 • updated 4 months ago by Brian Bushnell14k
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HISAT2 error running both --dta and --min and --max-intronlen
hisat rna-seq hisat2 written 4 months ago by GLFR0 • updated 4 months ago by Vijay Lakhujani1.2k
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hisat2 extract snps haplotypes VCF.py: AssertionError
snps hisat2 written 4 months ago by christian.cortes.campos0 • updated 4 months ago by WouterDeCoster21k
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How to build Hisat2 index for human genome (GRCh37 )?
rna-seq hisat2 written 4 months ago by vignesh90 • updated 4 months ago by h.mon8.7k
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Access to HISAT2 folder under miniconda
software error sequencing next-gen hisat2 written 8 months ago by wq0 • updated 8 months ago by Devon Ryan70k
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HISAT2 : Differences in paired and unpaired rates
assembly alignment hisat2 written 9 months ago by gwe34090 • updated 9 months ago by Devon Ryan70k
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fastq.gz Error: Not in gzip format
rnaseq hisat2 written 9 months ago by V50 • updated 9 months ago by Chris Miller18k
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