Showing: hisat2reset
<prev • 72 results • page 1 of 3 • next >
4
votes
0
answers
89
views
0
answers
Why difference in Hisat2 and bamqc from qualimap results?
bamqc qualimap rna-seq hisat2 written 6 days ago by Bioinfo170 • updated 5 days ago by Biostar ♦♦ 20
1
vote
2
answers
116
views
2
answers
Computer requirements for RNAseq alignment
rnaseq computer alignment hisat2 written 10 days ago by n.lu30 • updated 10 days ago by genomax46k
2
votes
1
answer
71
views
1
answer
Alignment and Counting strandedness redundancy?
alignment featurecounts rna-seq strand hisat2 written 17 days ago by brismiller10 • updated 17 days ago by h.mon13k
2
votes
0
answers
113
views
0
answers
Low read mapping efficiency with HISAT2
rna-seq hisat2 written 4 weeks ago by givans0 • updated 4 weeks ago by h.mon13k
0
votes
0
answers
88
views
0
answers
2
votes
2
answers
281
views
2
answers
0
votes
0
answers
86
views
0
answers
0
votes
0
answers
312
views
0
answers
Creating Hisat2 Index
genome hisat2 rna-seq index written 10 weeks ago by Bioinfo170
8
votes
2
answers
430
views
2
answers
Which strand specific option need to be used with HISAT2?
hisat2 rna-seq strandspecific written 10 weeks ago by Bioinfo170 • updated 10 weeks ago by JJ170
1
vote
0
answers
177
views
0
answers
1
vote
1
answer
172
views
1
answer
Cufflinks gives only CUFF names with a gtf.
cufflinks rna-seq hisat2 written 12 weeks ago by hkarakurt10 • updated 12 weeks ago by Macspider2.3k
0
votes
1
answer
191
views
1
answer
HISAT2 running pair end
rna-seq hisat2 written 3 months ago by catagui20
2
votes
2
answers
246
views
2
answers
Hisat2 multiple paired end reads
allignment rna-seq hisat2 written 3 months ago by sicat.paolo200 • updated 3 months ago by Vijay Lakhujani1.9k
3
votes
1
answer
314
views
1
answer
0
votes
1
answer
242
views
1
answer
3
votes
1
answer
412
views
1
answer
What is the difference between HISAT2 index "genome.tran" and "genome"
hisat2 rna-seq index written 4 months ago by xchnju10 • updated 4 months ago by WouterDeCoster27k
0
votes
0
answers
387
views
0
answers
0
votes
0
answers
292
views
0
answers
Alignment parameters within Hisat2
alignment rna-seq hisat2 written 5 months ago by amy1620 • updated 4 months ago by Biostar ♦♦ 20
1
vote
1
answer
308
views
1
answer
7
votes
2
answers
860
views
6 follow
2
answers
2
votes
1
answer
447
views
1
answer
HISAT2 indexes, GRCm38 or mm10?
hisat2 rna-seq index written 4 months ago by Buffo1.1k • updated 4 months ago by Sej Modha2.8k
5
votes
2
answers
430
views
2
answers
HISAT2 index creation
hisat2 rna-seq splice site index written 5 months ago by devbt1510
2
votes
1
answer
371
views
1
answer
Misamtch penalty in RNA-seq alignment
rna-seq hisat2 written 5 months ago by amy1620 • updated 5 months ago by Istvan Albert ♦♦ 76k
6
votes
2
answers
401
views
2
answers
RNA-seq read alignment
tophat hisat2 written 5 months ago by amy1620
5
votes
1
answer
323
views
1
answer
HISAT2-2.0.1 is not installed
hisat2 written 5 months ago by XBria40 • updated 5 months ago by Sej Modha2.8k
0
votes
0
answers
317
views
0
answers
Downloading HISAT2-2.0.1 NOT possible
hisat2 written 5 months ago by XBria40
2
votes
1
answer
434
views
1
answer
64
votes
9
answers
2.9k
views
28 follow
9
answers
Forum: Stranger Things: unexpected limitations of popular tools
forum samtools errors hisat2 written 9 months ago by Istvan Albert ♦♦ 76k • updated 6 months ago by Charles Plessy2.4k
4
votes
1
answer
433
views
1
answer
6
votes
1
answer
735
views
5 follow
1
answer
How many index files will be generated from hisat2-build
hisat2 rna-seq index written 10 months ago by Xiaokang ZH30 • updated 6 months ago by sxm8911140
<prev • 72 results • page 1 of 3 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 935 users visited in the last hour