Showing: hisat2reset
<prev • 118 results • page 1 of 4 • next >
0
votes
1
answer
66
views
1
answer
Stringtie elimination of important transcripts
assembly stringtie alignment rna-seq hisat2 written 15 hours ago by ra296710 • updated 12 hours ago by manuel.belmadani70
0
votes
1
answer
79
views
1
answer
3
votes
0
answers
158
views
6 follow
0
answers
0
votes
1
answer
136
views
1
answer
2
votes
1
answer
188
views
1
answer
1
vote
1
answer
103
views
1
answer
0
votes
1
answer
155
views
1
answer
Hisat2 output for stringtie
stringtie hisat2 written 7 weeks ago by Sam80 • updated 7 weeks ago by Vijay Lakhujani3.5k
3
votes
2
answers
167
views
2
answers
how to extract counts from bam/merge-bam without gtf
R samtools bowtie2 rna-seq hisat2 written 10 weeks ago by Shahzad10 • updated 10 weeks ago by michael.ante2.9k
0
votes
1
answer
207
views
1
answer
hisat2 and RSEM pipeline
software error gtf rna-seq rsem hisat2 written 10 weeks ago by Shahzad10 • updated 10 weeks ago by EagleEye6.1k
2
votes
1
answer
216
views
1
answer
Sorting BAM files from HISAT2 for DEXSeq
dexseq rna-seq hisat2 written 11 weeks ago by squando10 • updated 10 weeks ago by Ian5.3k
1
vote
0
answers
157
views
0
answers
HISAT2 SRR error
srr sra alignment rna-seq hisat2 written 11 weeks ago by NAVID.BAVI0 • updated 11 weeks ago by genomax60k
5
votes
1
answer
407
views
1
answer
0
votes
1
answer
262
views
1
answer
Is HISAT2 able to output only the best alignment?
hisat2 written 4 months ago by RoseString0 • updated 12 weeks ago by prasundutta87300
3
votes
1
answer
341
views
1
answer
best pipeline to get gene and transcript counts
count alignment star rna-seq hisat2 written 12 weeks ago by lkianmehr30 • updated 12 weeks ago by t.blasco9530
1
vote
0
answers
168
views
5 follow
0
answers
To fetch the reads which are being partially mapped to the genome
jvarkit hisat2 star rna-seq bowtie2 written 3 months ago by swadha20 • updated 3 months ago by genomax60k
0
votes
1
answer
250
views
1
answer
Is TCGA Breast cancer data strand specific?
geneexpression tcga rna-seq strand hisat2 written 3 months ago by Bioinfo270 • updated 3 months ago by genomax60k
1
vote
1
answer
131
views
1
answer
Hisat2 alignment results can be ued for TEtoolkit analysis
hisat2 tetoolkit written 3 months ago by lkianmehr30 • updated 3 months ago by h.mon22k
5
votes
1
answer
230
views
1
answer
Ovation RNA-seq system, bionfomatic alignment and htseq-count
htseq-count rna-seq hisat2 written 3 months ago by nanoide10 • updated 3 months ago by caggtaagtat390
2
votes
1
answer
156
views
1
answer
1
vote
1
answer
185
views
1
answer
2
votes
1
answer
294
views
1
answer
6
votes
0
answers
311
views
6 follow
0
answers
5
votes
0
answers
280
views
0
answers
8
votes
1
answer
366
views
6 follow
1
answer
2
votes
1
answer
190
views
1
answer
How to deal with single transcripts assigned to multiple genes?
stringtie rna-seq hisat2 written 3 months ago by antoinefelden20 • updated 3 months ago by RamRS20k
2
votes
1
answer
404
views
1
answer
2
votes
2
answers
246
views
5 follow
2
answers
Proper design for DESeq2 and other RNAseq general questions
stringtie deseq2 rna-seq hisat2 written 3 months ago by Stef0 • updated 3 months ago by swbarnes24.7k
6
votes
1
answer
314
views
1
answer
Problem mapping with STAR
tophat star hisat2 written 4 months ago by alvarocentron910 • updated 4 months ago by WouterDeCoster35k
1
vote
0
answers
255
views
0
answers
0
votes
0
answers
235
views
0
answers
Advantage of making HISAT2 genome index with annotation file
reference index annotations hisat2 written 4 months ago by piyushjo100 • updated 4 months ago by RamRS20k
<prev • 118 results • page 1 of 4 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2052 users visited in the last hour