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How to get transcript ID and tpm from the gtf files of ballgown outputs?
gtf ballgown hisat2 rna-seq awk written 6 weeks ago by newbie90 • updated 6 weeks ago by _r_am32k
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HiSat2 vs BowTie2 for mapping miRNA-seq reads
mirna-seq bowtie hisat2 written 6 months ago by Arindam Ghosh340 • updated 8 weeks ago by Biostar ♦♦ 20
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HISAT2: Question regarding providing file path to indexed genome folder
rna-seq hisat2 written 12 weeks ago by venura60 • updated 12 weeks ago by ATpoint44k
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Strandness setting for HISAT2 : BGI sequencing platform
rna-seq hisat2 written 3 months ago by venura60 • updated 3 months ago by GenoMax94k
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Warnings in the Hisat2 alignment output files
hisat2 alignment rna-seq cutadapt written 4 months ago by newbie90 • updated 4 months ago by swbarnes29.4k
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Hisat2 index builder seems to be running indefinitly
rna-seq hisat2 written 17 months ago by caranlove10 • updated 5 months ago by smg0
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How to run HISAT2 / Stringtie / Ballgown analysis starting with gff file
gtf gff stringtie hisat2 written 4.1 years ago by al-ash150 • updated 6 months ago by Biostar ♦♦ 20
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HISAT2 "error: Encountered internal HISAT2 exception (#1)"
hisat hisat2 written 21 months ago by zhu.ge0 • updated 7 months ago by Rks30
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HISAT2 alignment problem
rna-seq hisat2 written 8 months ago by kwanghoon20 • updated 8 months ago by geneticatt40
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HISAT2 indexes, GRCm38 or mm10?
hisat2 rna-seq index written 3.2 years ago by Buffo1.8k • updated 8 months ago by iraia.munoa100
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Infer strandedness of my single-end RNA-Seq data
strandedness rna-seq hisat2 written 8 months ago by DataFanatic300 • updated 8 months ago by kristoffer.vittingseerup3.5k
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hisat2 error: Symbol not found ... libstdc++.6.dylib
libstdc dylib tool rna-seq hisat2 written 8 months ago by axolootle0 • updated 8 months ago by lakhujanivijay5.3k
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