Showing: hisat2reset
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Strange output of samtools flag stat?
mouse samtools rna-seq hisat2 written 26 days ago by heking0 • updated 26 days ago by Istvan Albert ♦♦ 79k
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Hisat2 output for stringtie
stringtie hisat2 written 12 weeks ago by Sam100 • updated 12 weeks ago by biokoala3.6k
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how to extract counts from bam/merge-bam without gtf
R samtools bowtie2 rna-seq hisat2 written 3 months ago by Shahzad10 • updated 3 months ago by michael.ante3.0k
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hisat2 and RSEM pipeline
software error gtf rna-seq rsem hisat2 written 3 months ago by Shahzad10 • updated 3 months ago by EagleEye6.2k
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Sorting BAM files from HISAT2 for DEXSeq
dexseq rna-seq hisat2 written 3 months ago by squando10 • updated 3 months ago by Ian5.3k
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HISAT2 SRR error
srr sra alignment rna-seq hisat2 written 3 months ago by NAVID.BAVI0 • updated 3 months ago by genomax62k
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Is HISAT2 able to output only the best alignment?
hisat2 written 5 months ago by RoseString0 • updated 3 months ago by prasundutta87310
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best pipeline to get gene and transcript counts
count alignment star rna-seq hisat2 written 3 months ago by lkianmehr30 • updated 3 months ago by t.blasco9530
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To fetch the reads which are being partially mapped to the genome
jvarkit hisat2 star rna-seq bowtie2 written 4 months ago by swadha20 • updated 4 months ago by genomax62k
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Is TCGA Breast cancer data strand specific?
geneexpression tcga rna-seq strand hisat2 written 4 months ago by Vasu300 • updated 4 months ago by genomax62k
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Hisat2 alignment results can be ued for TEtoolkit analysis
hisat2 tetoolkit written 4 months ago by lkianmehr30 • updated 4 months ago by h.mon23k
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Ovation RNA-seq system, bionfomatic alignment and htseq-count
htseq-count rna-seq hisat2 written 4 months ago by nanoide10 • updated 4 months ago by caggtaagtat420
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