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Should I use HMMs from Pfam or build them from scratch?
bioinformatics hmm pfam written 13 days ago by garfield3200 • updated 13 days ago by Mensur Dlakic7.0k
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hmm without realigning
alignment hmm written 21 months ago by dbsseven0 • updated 18 days ago by lagartija90
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What should I use as a reference in hivmmer
hiv genotyping hmm hivmmer hmmer written 5 months ago by nadinezakkak0 • updated 5 months ago by Biostar ♦♦ 20
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Alignment score in HMMER
alignment hmm written 5 months ago by bbravi.bb0 • updated 5 months ago by Mensur Dlakic7.0k
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How to retrieve all hmm from TIGRFAM for Cas (CRISPR-associated) proteins?
crispr hmm cas written 3.6 years ago by mschmid150 • updated 6 months ago by Biostar ♦♦ 20
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Tool to segment genome according to SNP density?
hmm snp density segmentation written 3.1 years ago by abascalfederico1.1k • updated 11 months ago by Biostar ♦♦ 20
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HMMER: hmmscan ---> hmmsearch
hmm pfam protein hmmer written 15 months ago by Metaxo0 • updated 12 months ago by h.mon31k
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How to use anvio's gzipped HMM externally with HMMER?
binning hmm anvio written 12 months ago by O.rka210 • updated 12 months ago by h.mon31k
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Understanding hhblits output
hhsuite homology hhblits hmm written 16 months ago by mnsp08840 • updated 15 months ago by Biostar ♦♦ 20
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Erorr running HHblits
hmm homology protein written 17 months ago by max_19150 • updated 15 months ago by sofimukhtar10
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what are the differences between an hmmscan and a Pfamscan against PfamA?
hmm protein hmmscan pfam written 5.7 years ago by dago2.6k • updated 15 months ago by Biostar ♦♦ 20
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HH-suite custom db with precomputed MSA
hh-suite hmm msa written 16 months ago by mnsp08840 • updated 16 months ago by Biostar ♦♦ 20
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custom database in HH-suite
domain hh-suite orthogroup homology hmm written 17 months ago by yp1960 • updated 17 months ago by Joe18k
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HMM and NGS mapping
ngs hmm written 20 months ago by kwicher10
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Classify Or Align ?
classification metagenomics alignment hmm blast written 8.8 years ago by Manu Prestat4.0k • updated 21 months ago by lagartija90
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Profile HMM hidden state interpretation
profile hmm hmm hmmer written 21 months ago by jaip21720 • updated 21 months ago by Jean-Karim Heriche23k
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Visualizing Hmm Files Of Hmmer3
hmm visualization hmmer written 9.4 years ago by Cjt370 • updated 21 months ago by leon.kuchenbecker0
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Align a position-specific weight matrix against a sequence database
pssm pwm hmm protein written 23 months ago by M0 • updated 22 months ago by Biostar ♦♦ 20
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