Showing: htsjdkreset
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5
votes
1
answer
1.3k
views
1
answer
Extracting tlen From BAM File Using htsjdk
htsjdk bam samtools sam tlen written 2.3 years ago by Hakan.Erol.HE10 • updated 11 weeks ago by Biostar ♦♦ 20
0
votes
0
answers
845
views
0
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Library Htsjdk to query a vcf file
htsjdk vcf java annotation written 3.0 years ago by onemoreuser10 • updated 4 months ago by RamRS20k
1
vote
1
answer
229
views
1
answer
Efficient processing of a read and its mate from bam file
htsjdk java bam samtools sam written 6 months ago by mhasa00630 • updated 6 months ago by finswimmer9.9k
2
votes
1
answer
263
views
1
answer
Extract the mate pair information with htsjdk
htsjdk bam samtools written 6 months ago by mhasa00630 • updated 6 months ago by Pierre Lindenbaum116k
2
votes
1
answer
266
views
1
answer
Extract the SAM File header section
htsjdk java bam samtools sam written 7 months ago by mhasa00630 • updated 7 months ago by Pierre Lindenbaum116k
1
vote
1
answer
936
views
1
answer
converting SAMRecord to JSON or String format
htsjdk json sam samrecord written 2.6 years ago by dsvispute910 • updated 11 months ago by Biostar ♦♦ 20
1
vote
1
answer
1.3k
views
1
answer
Help with Fastqc error
htsjdk fastqc written 2.5 years ago by mink2mink20 • updated 18 months ago by RamRS20k
2
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1
answer
1.2k
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1
answer
0
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0
answers
904
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0
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2
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1
answer
1.0k
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1
answer
VCFFileReader doesn't close
htsjdk java written 3.9 years ago by timofeevbog30 • updated 2.5 years ago by Biostar ♦♦ 20
4
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2
answers
1.5k
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2
answers
picard: error reading BAM file
htsjdk picard bam written 2.9 years ago by abascalfederico1.0k • updated 2.9 years ago by igor7.3k
2
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1
answer
1.0k
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1
answer
Corrupted tabix index?
htsjdk java tabix written 3.2 years ago by dariober9.9k
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0
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924
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0
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7
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2
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2.1k
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2
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15
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3
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1.9k
views
3
answers
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