Showing: htslibreset
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Bcftools merge sample order
vcf dna bcftools multisample htslib written 20 days ago by Chadi Saad50 • updated 19 days ago by paolo00290
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2
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234
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8 follow
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Can I read chrom, strand, pos, len from bam files without htslib?
htslib written 7 weeks ago by Click downvote650 • updated 5 weeks ago by benformatics350
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5 follow
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Minimal example of using htslib from conda to build a simple c file?
C conda htslib written 6 weeks ago by Click downvote650 • updated 6 weeks ago by John Marshall1.4k
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How do I get the strand of a read when using htslib?
htslib written 7 weeks ago by Click downvote650 • updated 7 weeks ago by Alex Reynolds26k
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1
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GNU autotools and samtools/htslib
samtools configure C autotools htslib written 10 weeks ago by Pierre Lindenbaum115k • updated 10 weeks ago by John Marshall1.4k
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11 follow
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5 follow
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3
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7 follow
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Resources to learn htslib and C/C++
c++ C htslib written 2.0 years ago by QVINTVS_FABIVS_MAXIMVS2.2k • updated 21 months ago by tlytiger0
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Tool: CuteVcf : A Qt application to view VCF file
gui vcf qt htslib tabix tool written 24 months ago by sacha1.6k
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Splitting SAM/BAM alignments
cigar bam sam htslib written 2.1 years ago by Zev.Kronenberg11k • updated 2.1 years ago by Pierre Lindenbaum115k
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1
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Is there any C API documentation for HTSLIB?
api bam doc htslib written 2.2 years ago by chen1.7k • updated 2.2 years ago by Devon Ryan86k
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1
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News: Samtools/htslib/bcftools 1-3 released
samtools news bcftools htslib written 3.0 years ago by Devon Ryan86k • updated 2.2 years ago by xing0
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C++ how to read VCF file in indexed bgzip format?
bgzip samtools bcftools vcftools htslib written 2.6 years ago by Chen760 • updated 2.6 years ago by rudy.d.arthur20
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1
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Perl API for latest version of Tabix (now part of HTSlib)?
tabix htslib written 3.4 years ago by Christian2.7k • updated 2.7 years ago by ayates60
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Reading CRAM files in pysam
python htslib samtools pysam cram written 3.0 years ago by QVINTVS_FABIVS_MAXIMVS2.2k • updated 3.0 years ago by duxan50
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htslib C API: getting reads from region
C api samtools htslib written 3.4 years ago by QVINTVS_FABIVS_MAXIMVS2.2k • updated 3.4 years ago by Pierre Lindenbaum115k
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[HTSlib] cannot find htscmd
htslib written 3.6 years ago by szuszmok40 • updated 3.6 years ago by Devon Ryan86k
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News: Samtools/htslib v1.2 released
samtools news bcftools htslib written 3.8 years ago by Devon Ryan86k
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Converting BAM to Fastq with HTSlib htscmd
tophat bam fastq bam2fastq htslib written 4.3 years ago by trakhtenberg150 • updated 4.1 years ago by piet1.6k
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1.4k
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News: Samtools/htslib/bcftools 1.1 released
news samtools htslib written 4.2 years ago by Devon Ryan86k
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2.6k
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1
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meaning of new symbols in samtools mpileup format?
samtools snp pileup htslib written 4.3 years ago by Dejian1.2k • updated 4.3 years ago by Devon Ryan86k
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problem while Installing BCFtools/htslib
installation bcftools htslib written 4.4 years ago by always_learning930 • updated 4.4 years ago by 141341254653464453.4k
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