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Recent Replies
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Thank you so much!
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that's how I understood it worked, from a forum discussion on Sourceforge I believe, where the developer Heng Li talked mentioned some int…
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Oooh thank you for your answer - it answers my question (i.e. I can use BWA with very large and very small reference sequences, because the…
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Thank you https://www.biostars.org/u/71b2b378/ ! Only thing I would suggest is people should create a new environment for this version inst…
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As [already said][1] by [foeckingmf][2] it seems to be a bug.
I had the same problem and solved it downgrading bax2bam from version 0.0.11…
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bedops --element-of 1 <(gunzip -c merged.vcf.gz | vcf2bed -) <(sort-bed panel.bed) > subset.bed
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MUSCLE is a [multiple sequence alignment][1] program, now this might sound a bit confusing but this doesn't mean it is meant to align very…
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One thing that ChIPseeker has is the flank option. See [here][1]. It defines a flanking region around the peaks, and reports the genes tha…
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Also, if your wig file contains multiple sections, you may want to add the `--multisplit foo` option.
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Can you please cut and paste the output of:
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No, the other relevant entries of dds are not affected if you only change the level of the group. Normalization stays the same as it is the…
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While it is usually best and easier to explain/justify the use of a single threshold, I think it is ok to use different ones as long as it …
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