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63
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10k
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62 follow
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Variant allele frequency in TCGA and ICGC
genome vcf icgc tcga maf written 4.6 years ago by Maarten Slagter110 • updated 3.5 years ago by Biostar ♦♦ 20
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1
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2.4k
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1
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CNV and Clinical Data for Cancer - Alternative to TCGA or ICGC
icgc tcga cnv cancer written 5.6 years ago by dirigible2012320 • updated 5.6 years ago by Obi Griffith18k
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0
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1.7k
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ICGC data ontology
mage-tab icgc sdrf written 4.6 years ago by Maarten Slagter110 • updated 11 months ago by Biostar ♦♦ 20
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1
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1
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ICGC Variant Calling Pipelines
icgc mutation calling written 4.3 years ago by morovatunc450 • updated 4.3 years ago by ivivek_ngs4.9k
7
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1
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3.3k
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1
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Download ICGC gene expression data
icgc gene expression download cancer written 4.2 years ago by lkmklsmn930 • updated 4.1 years ago by zlira80
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Where can I find more Cancer Datasets for Validation purposes
gene icgc tcga resources cancer written 5.3 years ago by sviatoslav.kendall770 • updated 5.3 years ago by frcamacho190
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2.2k
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1
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How to calculate aneuploidy across TCGA / ICGC tumor samples
aneuploidy tumor icgc tcga somatic written 5.1 years ago by mrgraeme20 • updated 5.1 years ago by Sean Davis26k
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How to get annotation of miRNAs expression from ICGC ?
icgc rna-seq mirna written 4.2 years ago by jack800 • updated 4.1 years ago by Biostar ♦♦ 20
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1
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GL000201,GL000202... etc What are these?
wgs icgc bam written 4.1 years ago by morovatunc450 • updated 4.1 years ago by igor10k
7
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1
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1.6k
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5 follow
1
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Data retrieval icgc
icgc r-package written 3.3 years ago by anshupa.vssut50 • updated 17 months ago by dodausp140
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0
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Quality scores in ICGC simple somatic mutation file
simple somatic mutation icgc quality score written 5.0 years ago by tralynca50 • updated 5.0 years ago by Ying W4.0k
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Microarray data analysis
gene log ratio gene expression microarray icgc written 4.7 years ago by maki.dur0 • updated 4.7 years ago by vivekbhr550
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1
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Does anybody success to download data using icgc-storage-client ?
data icgc download written 4.3 years ago by sacha1.9k • updated 20 months ago by RamRS27k
5
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901
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Using 2 different references in my pipeline
genome icgc next-gen written 3.6 years ago by michal.devir0 • updated 3.6 years ago by igor10k
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5 follow
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2
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How to understand somatic mutation of ICGC data
genome icgc somatic mutation written 3.0 years ago by wangshx10 • updated 3.0 years ago by solo777370
0
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662
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`chromosome_strand` all change to `1`
icgc awk written 2.9 years ago by wangshx10
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970
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ICGC file ids
data icgc wgs written 2.8 years ago by zoharm0
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728
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0
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806
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0
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714
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Blacklist and greylist in PCAWG
icgc tcga pcawg written 2.4 years ago by shiyang9350
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745
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icgc gene expression data
icgc written 2.2 years ago by Pappu1.9k
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992
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0
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1
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1
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600
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