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<prev • 219 results • page 1 of 8 • next >
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reload IGV exported feature to Gviz
gviz igv written 9 days ago by ta_awwad • 130
7
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1
answer
127
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1
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Find Intersections Between ClinVar Track and VCF In IGV
vcf clinvar igv written 12 days ago by otwtgin2010 • 0 • updated 12 days ago by rbagnall • 1.2k
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3
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132
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3
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kallisto pseudoaligned bam files to IGV
kallisto rna-seq igv written 20 days ago by hothriananya • 40
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70
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Can IGV tell me where to look?
minion nanopore igv written 14 days ago by francois • 10
2
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0
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108
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problem with genome viewer IGV
bam mapping igv written 20 days ago by StudentBio • 0 • updated 20 days ago by genomax ♦ 51k
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1
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74
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1
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IGV not highlighting possible variants
igv written 23 days ago by francois • 10 • updated 23 days ago by genomax ♦ 51k
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99
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two way get analysis data to get the obvious range difference in IGV
peak range chip-seq igv written 29 days ago by mikysyc2016 • 10
6
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1
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163
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1
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Where are my reads in IGV?
alignment igv written 4 weeks ago by francois • 10
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2
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186
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2
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"Invalid BAM file header: missing sequence name in file" when trying to visualise .bam file in IGV
alignment bam igv written 4 weeks ago by francois • 10 • updated 4 weeks ago by WouterDeCoster ♦ 30k
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1
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92
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1
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Can IGV be used to visualize Mitogenome readpools
igv written 5 weeks ago by F.I.2011 • 10 • updated 5 weeks ago by b.nota ♦ 4.3k
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149
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1
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Bedtools intersect -u or -wa causing issues
bedtools python pybedtools igv written 5 weeks ago by alex.v.nesta • 0
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2
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144
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5 follow
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Is there a way to save a specific Gene in IGV of a whole exome sample?
sequence bam igv written 7 weeks ago by mhmtgenc85 • 30 • updated 7 weeks ago by sacha • 1.3k
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1
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153
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1
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Error of SAMSequenceDictionary
samtools sam igv written 9 weeks ago by niu.shengyong • 30 • updated 9 weeks ago by genomax ♦ 51k
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1
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150
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1
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IGV tracks gene annotation
gene gff igv written 10 weeks ago by bitpir • 70 • updated 10 weeks ago by h.mon ♦ 16k
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97
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IGV: how is "Quality weight allele fraction" calculated?
varint calling snv igv written 11 weeks ago by omer.k • 20
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184
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Export coverage Track from IGV
bedtools genomecov igv depth written 11 weeks ago by MarVi • 0
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1
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177
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1
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IGV SNP glyph question
snp igv written 12 weeks ago by mark.rose • 10 • updated 11 weeks ago by finswimmer ♦ 3.6k
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2
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124
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2
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Can IGV visualize clustal format alignment?
igv written 3 months ago by shadowstep • 0 • updated 3 months ago by Ram ♦ 15k
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1
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236
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1
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BAM File Export Coverage Values from IGV or using PySam/Samtools
alignment samtools igv bam sequencing written 3 months ago by EOX123 • 10 • updated 3 months ago by cpad0112 • 7.6k
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199
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No mutations in BAM (IGV) but a mutation in final VCF?
variant calling gatk haplotypecaller bam igv written 3 months ago by mhmtgenc85 • 30 • updated 3 months ago by WouterDeCoster ♦ 30k
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119
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pileup vs. IGV insertion locations
pileup igv written 3 months ago by blur • 90
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2
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240
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2
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Where can I find GV .genome files for igvtools
chip-seq igv written 3 months ago by Bella_p • 50 • updated 3 months ago by dariober ♦ 9.2k
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1
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274
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1
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reads y-position in a bam viewer
bam position igv written 4 months ago by sacha • 1.3k
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2
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250
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2
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Sanger validated SNP not present in IGV despite 10X coverage at site??!!
sanger ngs igv written 4 months ago by rb14sp • 40 • updated 4 months ago by finswimmer ♦ 3.6k
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1
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234
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11 follow
1
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IGV - is there a way to extract bulk information?
igv written 4 months ago by blur • 90 • updated 4 months ago by Chris Miller ♦ 20k
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1
answer
224
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1
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Create a custom exome .genome for IGV
exome wes igv sequencing written 4 months ago by jgarces • 0 • updated 4 months ago by h.mon ♦ 16k
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4
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452
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6 follow
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IGV command line control
command line remote control igv written 4 months ago by damian.loska • 10 • updated 4 months ago by dariober ♦ 9.2k
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4
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1.4k
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5 follow
4
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Kallisto pseudobam to IGV
alignment igv kallisto pseudobam rna-seq written 12 months ago by mac • 60 • updated 5 months ago by mmfansler • 180
2
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1
answer
277
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1
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Understanding the VCF data from my variant calling
vcf variant calling snps igv indels written 5 months ago by jaqx008 • 30 • updated 5 months ago by jared.andrews07 • 750
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IGV indels not included in consensus sequence
indels ngs alignment igv consensus sequence written 5 months ago by thomas.welch • 0 • updated 5 months ago by Biostar ♦♦ 20
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