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RadSeq and short read
illumina radseq clustering written 3 days ago by gbl1 • 70
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bcl2fastq2: how to correctly use the --use-bases-mask for different sequencing methods by Illumina ?
illumina --use-bases-mask bcl2fastq2 sequencing written 4 months ago by badredda • 70
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masurca runCA failed
masurca assembly tool stack illumina written 14 days ago by mariachiaracascarano • 0
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different extractions for Hybrid assembly
illumina hybrid assembly dna extraction minon written 14 days ago by mariachiaracascarano • 0
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Blog: NGS-based research, empowering medical professionals through user-friendly software
illumina ngs dna-seq blog diagnostics written 22 days ago by David Langenberger ♦ 8.7k
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How to take out sequences with barcode?
illumina fastq sequencing barcode written 17 days ago by suvratha • 20 • updated 17 days ago by Ido Tamir ♦ 4.9k
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masurca invalid forward file for PE library
assembly tool masurca illumina written 19 days ago by mariachiaracascarano • 0
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De novo transcriptome assembly using Trinity
gaiix illumina rna-seq written 27 days ago by 1234anjalianjali1234 • 30 • updated 27 days ago by JC ♦ 7.6k
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How To Remap Humanht V4 Chips To Hg19?
illumina microarray written 5.0 years ago by liu4gre • 200 • updated 6 weeks ago by Biostar ♦♦ 20
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Is there a benefict of denoising reads for project that are not using 16S amplicon ?
illumina 16s denoising amplicon written 6 weeks ago by sacha • 1.7k • updated 6 weeks ago by Asaf ♦ 5.3k
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within array vs between array normalization (methylation)
normalization methylation microarrays illumina written 7 weeks ago by rorio • 10 • updated 7 weeks ago by Kevin Blighe ♦ 39k
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Number of passing clusters vs. number of read pairs vs. total number of reads
reads illumina flowcell written 8 weeks ago by AP • 90 • updated 8 weeks ago by genomax ♦ 63k
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Assembling ESTs and illumina reads
ests illumina de-novo transcriptome written 8 weeks ago by Joseph Hughes • 2.7k
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add UMI sequences to fastq read name
illumina umi fastq written 9 weeks ago by User6891 • 250 • updated 8 weeks ago by i.sudbery ♦ 4.0k
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Extracting contaminated reads from the sequenced data
genome illumina extraction sequencing written 9 weeks ago by manjumoorthy95 • 0 • updated 9 weeks ago by genomax ♦ 63k
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PhiX forward and reverse reads for MiSeq and NextSeq Platform
illumina next-gen sequencing written 10 weeks ago by kspata • 40
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Best way of Merging Multiple Lanes generated by HiSeq 2000, index BAM or VCF?
wgs sam mapping illumina hiseq written 10 weeks ago by venuraherath • 20
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Strain Assignments to QTL Data
qtl muga rqtl2 genotype illumina written 10 weeks ago by annacsalvador • 0
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Merging fastq files
illumina fastq miseq merge rna-seq written 5 months ago by william.mcentegart • 0 • updated 11 weeks ago by Biostar ♦♦ 20
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Meaning of TOP/BOTTOM strand and QC implications
illumina snp written 12 weeks ago by ognjen011 • 150
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Trio SNP data to test script (preferably from Infinium Global Screening Array)
trio array microarray snp illumina written 3 months ago by kurt.cagri • 0
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problem wit unzipping fastq.gz file
illumina fastq rna-seq fastq.gz written 3 months ago by yff • 0 • updated 3 months ago by JY Nam • 20
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Illumina final report file to PLINK
illumina sequencing plink gwas written 3 months ago by f.abbondanza94 • 0 • updated 3 months ago by zx8754 ♦ 6.7k
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Adapter Dimer Contamination Irregularities Between Multiplexed Samples [Chip-Seq/Rna-Seq]
illumina chip-seq rna-seq hiseq written 6.7 years ago by Sukhdeep Singh ♦ 9.6k • updated 3 months ago by qliu • 0
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Where does Illumina make MEGA_Consortium_v2_15070954_A2.csv available?
illumina genotyping written 3 months ago by kynnjo • 20
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Ilumina V2 vs V3 for amplicon sequencing
illumina amplicon next-gen sequencing written 4 months ago by joelslade • 10
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5 follow
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News: Illumina to Acquire Pacific Biosciences
illumina news pacbio written 4 months ago by Istvan Albert ♦♦ 79k
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Number of reads per lane
illumina sequencing rna-seq flowcell written 4 months ago by kamel • 10 • updated 4 months ago by genomax ♦ 63k
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Trouble de-multiplexing single index paired-end illumina library
illumina singe index demultiplexing written 5 months ago by caverill • 40
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5 follow
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Detection p-value Illumina beadchip
geo illumina beadchip written 5 months ago by elb • 160
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