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<prev • 154 results • page 1 of 6 • next >
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Why my chromosome data set are reduced after the imputation in Michigan Server?
gwas imputation michigan imputation server written 1 day ago by jongyun.jung • 0
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73
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Imputation of scRNA-seq data
scrna-seq imputation rna-seq written 3 days ago by mariafirulevabio • 20
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85
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How to use minimac3 to impute genotypes from a SNPmatrix dataset
genome imputation sequencing written 12 days ago by caesar_etos • 0
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1
answer
76
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1
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IMPUTE2- Map file for custom reference panel
impute2 reference panel imputation written 17 days ago by john.michel.rouhana • 0 • updated 15 days ago by h.mon ♦ 26k
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Convert MACH (imputation) file formats to .gen file format
gen mldose mlinfo imputation written 23 days ago by anamaria • 40
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1
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146
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1
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Memory error during imputation of full genome data for multiple samples
imputation snp beagle written 29 days ago by waqaskhokhar999 • 40 • updated 28 days ago by ociramoi • 0
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3
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3
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Updating allele frequency (AF) and minor allele frequency (MAF) INFO fields in .vcf
vcf imputation qc vcftools snp written 15 months ago by JSEM • 20 • updated 7 weeks ago by seta • 1.2k
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131
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Imputating individual haplotype phase w/o Plink
haplotypes imputation genetics plink beagle written 11 weeks ago by los • 0
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132
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How to convert DS value for chrX non-PAR SNPs in male
imputation snp chrx par written 12 weeks ago by Apprentice • 20
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172
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Michigan imputation server quality control failed
imputation genotype written 3 months ago by Phoenix Mu • 10
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Beagle imputation results quality control
vcf imputation beagle written 4.0 years ago by eyb • 180 • updated 3 months ago by Kevin Blighe ♦ 44k
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1
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312
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1
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Quality control after genotype imputation
imputation written 3 months ago by jzannatun • 0
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380
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Beagle 4.1 imputation
imputation written 5 months ago by cetin.m • 30 • updated 5 months ago by Biostar ♦♦ 20
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1
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449
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1
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UK biobank HLA imputation data
hla uk biobank imputation written 7 months ago by aleph9999 • 10 • updated 5 months ago by matemanc • 0
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150
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Beagle permanent file
imputation beagle written 5 months ago by cetin.m • 30
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279
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Genotyped SNPs were lost after michigan imputation server imputation and phasing
imputation michigan phasing written 6 months ago by Shicheng Guo • 7.5k
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1
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894
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9 follow
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How to fix this strand flips for Michigan Imputation Server?
imputation snp written 7 months ago by Sharon • 440 • updated 7 months ago by Shicheng Guo • 7.5k
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3
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1.1k
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3
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Single Cell RNAseq Imputation in Seurat
imputation rna-seq single cell written 9 months ago by bioinformatics.cancer • 180 • updated 7 months ago by kristoffer.vittingseerup • 1.9k
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331
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How to get "best guess" genotypes after running Beagle 4.1
imputation beagle written 7 months ago by vmuir • 0
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1
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468
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1
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Beagle VCF header issue
imputation snp beagle written 8 months ago by vmuir • 0
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1
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355
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1
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Rare variants imputation
imputation sequencing written 8 months ago by reds.nik • 40 • updated 8 months ago by Kevin Blighe ♦ 44k
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235
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Sanger imputation assigns some empty SNP IDs, Is this normal?
vcf sanger imputation written 8 months ago by rshoobs • 0
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1
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278
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1
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Run of homozigosity on multiple imputed chips
roh imputation snp written 10 months ago by giovanni.birolo • 0 • updated 9 months ago by Kevin Blighe ♦ 44k
1
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1
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366
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1
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Preference about IMPUTATION TOOL
snps imputation tool written 9 months ago by wonseok.cchoi • 0 • updated 9 months ago by thassia.carratto • 10
2
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1
answer
731
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1
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How is imputation r2 calculated in minimac3?
imputation minimac3 gwas written 9 months ago by cityofwisdom • 10 • updated 9 months ago by zx8754 ♦ 7.5k
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Generating .ped and .map files from .dose.vcf.gz files
gwas open imputation written 3.3 years ago by Diego.Morales • 10 • updated 9 months ago by RamRS ♦ 22k
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1
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609
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1
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Recoding bim to vcf file with forcing allele-A1
imputation genetics plink written 9 months ago by marcus.tutert • 0 • updated 9 months ago by Kevin Blighe ♦ 44k
4
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722
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Help with Sanger Imputation Service
variant calling imputation rna-seq written 9 months ago by sandKings • 10
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336
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Negative values for imputed genotypes on X chromsomes in females
x chromosome X imputation genotypes written 11 months ago by Caragh • 40 • updated 9 months ago by Biostar ♦♦ 20
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Low SNP imputation concordance - except chromosome 1
impute2 imputation plink snp gwas written 10 months ago by muraved • 10
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