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<prev • 205 results • page 1 of 7 • next >
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about STRAND correction for imputation
flip imputation snp strand mismatch written 9 weeks ago by nayeona.hi • 50 • updated 6 days ago by Biostar ♦♦ 20
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Imputation on low coverage samples
popgen next-gen imputation sequencing written 26 days ago by selplat21 • 20
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Why are structural variants typically not tagged as well as SNPs?
wgs imputation structural variation written 5 weeks ago by curious • 460
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Flip strands error from Michigan Imputation Server
sequence imputation plink snp michigan written 6 weeks ago by ryshi.study • 10 • updated 6 weeks ago by zx8754 ♦ 9.7k
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how to change the strand?
dbsnp imputation snp strand written 9 weeks ago by nayeona.hi • 50 • updated 9 weeks ago by Kevin Blighe ♦ 68k
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Genotype imputation comparison
vcf gatk imputation genotype dosages files written 9 weeks ago by alessandrorsetti • 0 • updated 9 weeks ago by GenoMax ♦ 93k
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Is imputation of genotyped data for GWAS necessary?
imputation geneitcs gwas written 9 weeks ago by new_bee_GWAS • 0
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142
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Why different reference panels change the signal for a SNP?
hapmap hrc imputation referencepanel written 10 weeks ago by anamaria • 110 • updated 10 weeks ago by curious • 460
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how to split M3VCF by ID?
imputation written 11 weeks ago by dec986 • 230
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197
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Difference in imputation between platforms and RS names
rs minimac snps imputation mach written 11 weeks ago by anamaria • 110 • updated 11 weeks ago by Kevin Blighe ♦ 68k
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How does beagle get phase for sites that are NOT in the reference panel
imputation phasing beagle written 11 weeks ago by curious • 460
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Beagle imputation run time
imputation snp beagle written 12 weeks ago by joshuaehill • 10 • updated 12 weeks ago by Bioinformatics_NewComer • 320
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Post-imputation QC GWAS analysis
gwas imputation rstudio topmed written 3 months ago by AR • 0
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125
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Refrence datasets for imputation
imputation snp written 3 months ago by melania 2282 • 100
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127
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How do I convert GPs to GLs?
vcf imputation written 3 months ago by devenvyas • 650
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question about the impute2 output format
gwas imputation snp written 3.8 years ago by Peter Chung • 120 • updated 3 months ago by Kevin Blighe ♦ 68k
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ERROR: Reference and target files have no markers in common in interval: 6:63979-21294564
imputation beagle written 4 months ago by jkheirm • 20 • updated 3 months ago by Biostar ♦♦ 20
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I/O error when converting Plink files to Merlin format for imputation using MACH?
mega2 imputation mach written 5 months ago by anamaria • 110 • updated 3 months ago by Biostar ♦♦ 20
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GWAS data QC in PLINK
gwas qc plink imputation written 4 months ago by AR • 0 • updated 3 months ago by Sam • 3.3k
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Imputation results from TOPMED server
imputation snp topmed written 4 months ago by melania 2282 • 100
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How to filter INFO on a vcf file with bcftools
vcf bcftools imputation info written 5 months ago by borarc3 • 10 • updated 4 months ago by biotechdiya • 30
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7 follow
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Converting between Impute2 and Ped/Map after imputation - 1st column dashes (--) problem
imputation plink written 8.8 years ago by Philip Robinson • 40 • updated 4 months ago by Biostar ♦♦ 20
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how to make LEGEND file for Reference Panels?
legend file shapeit imputation pre-phasing written 4 months ago by nayeona.hi • 50 • updated 4 months ago by Kevin Blighe ♦ 68k
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Help preparing my VCF files for Sanger Imputation
vcf sanger imputation snp genome written 4 months ago by arcadian • 0
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293
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Imputation output from TOPMED server
imputation snp topmed written 5 months ago by melania 2282 • 100 • updated 5 months ago by zx8754 ♦ 9.7k
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TopMed imputation server
imputation qc rsid written 5 months ago by melania 2282 • 100 • updated 5 months ago by nleone • 10
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QC after imputation
qc imputation snp written 9 months ago by aurina.arnatk • 10 • updated 5 months ago by Mahan • 70
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29 follow
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How To Analyze Imputed Gwas Data
gwas imputation plink snp R written 9.7 years ago by Stephen ♦ 2.7k • updated 5 months ago by Mahan • 70
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How is vcf-merge handling different INFO for a single variant?
bcftools vcfools imputation rna-seq written 5 months ago by Cindy • 10
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Sequence of steps in quality control of genetic data
genome quality control imputation plink written 5 months ago by kl • 10 • updated 5 months ago by GenoMax ♦ 93k
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