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<prev • 213 results • page 1 of 8 • next >
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could not load index bfc tools af-dis plugin
vcf bcf tools af-dist imputation written 7 days ago by kstafford32 • 0
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54
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bcf tools fixref error
fixref bcftools imputation snpflip topmed written 8 days ago by kstafford32 • 0
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1
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527
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Post-imputation QC GWAS analysis
gwas imputation rstudio topmed written 6 months ago by AR • 0 • updated 10 days ago by Biostar ♦♦ 20
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99
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Beagle conform-gt error
conformgt java imputation tomped beagle written 12 days ago by kstafford32 • 0
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62
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Beagle Conform-gt Java Error
java beagle imputation conform-gt topmed written 12 days ago by kstafford32 • 0 • updated 12 days ago by GenoMax ♦ 96k
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Imputation and SNPs pipeline
imputation snps pipeline written 14 days ago by dzisis1986 • 20
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378
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6 follow
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ERROR: Reference and target files have no markers in common in interval: 6:63979-21294564
imputation beagle written 7 months ago by jkheirm • 30 • updated 23 days ago by Domi • 0
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Duplicate SNP IDs in TOPMed Imputation output for gwas data
gwas imputation snp topmed written 24 days ago by yy237 • 30 • updated 23 days ago by Kevin Blighe ♦ 71k
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Michigan Imputation Server - typed-only sites?
vcf imputation michigan snp genotyping written 12 months ago by Volka • 120 • updated 29 days ago by jpeijia • 0
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Missing value imputation for bulk RNA-seq data - which tool to use?
missing data imputation missing values rna-seq nas written 6 weeks ago by joker33 • 30 • updated 4 weeks ago by mkaythomp • 0
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Error when importing dosage file using PLINK2 for imputation analysis
gwas plink2 imputation plink dosage_file written 11 weeks ago by hkj7 • 0 • updated 11 weeks ago by Ram ♦ 32k
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243
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about STRAND correction for imputation
flip imputation snp strand mismatch written 5 months ago by nayeona.hi • 50 • updated 3 months ago by Biostar ♦♦ 20
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157
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Imputation on low coverage samples
popgen next-gen imputation sequencing written 3 months ago by selplat21 • 20
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Why are structural variants typically not tagged as well as SNPs?
wgs imputation structural variation written 4 months ago by curious • 500
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217
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Flip strands error from Michigan Imputation Server
sequence imputation plink snp michigan written 4 months ago by ryshi.study • 10 • updated 4 months ago by zx8754 ♦ 9.9k
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251
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how to change the strand?
dbsnp imputation snp strand written 5 months ago by nayeona.hi • 50 • updated 5 months ago by Kevin Blighe ♦ 71k
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212
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Genotype imputation comparison
vcf gatk imputation genotype dosages files written 5 months ago by alessandrorsetti • 0 • updated 5 months ago by GenoMax ♦ 96k
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Is imputation of genotyped data for GWAS necessary?
imputation geneitcs gwas written 5 months ago by new_bee_GWAS • 0
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200
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Why different reference panels change the signal for a SNP?
hapmap hrc imputation referencepanel written 5 months ago by anamaria • 140 • updated 5 months ago by curious • 500
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171
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how to split M3VCF by ID?
imputation written 5 months ago by dec986 • 260
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1
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276
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Difference in imputation between platforms and RS names
rs minimac snps imputation mach written 5 months ago by anamaria • 140 • updated 5 months ago by Kevin Blighe ♦ 71k
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199
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How does beagle get phase for sites that are NOT in the reference panel
imputation phasing beagle written 5 months ago by curious • 500
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262
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1
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Beagle imputation run time
imputation snp beagle written 5 months ago by joshuaehill • 10 • updated 5 months ago by Bioinformatics_NewComer • 320
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167
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Refrence datasets for imputation
imputation snp written 6 months ago by melania 2282 • 100
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191
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How do I convert GPs to GLs?
vcf imputation written 6 months ago by devenvyas • 670
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11 follow
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question about the impute2 output format
gwas imputation snp written 4.0 years ago by Peter Chung • 130 • updated 6 months ago by Kevin Blighe ♦ 71k
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258
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I/O error when converting Plink files to Merlin format for imputation using MACH?
mega2 imputation mach written 8 months ago by anamaria • 140 • updated 6 months ago by Biostar ♦♦ 20
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1
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296
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GWAS data QC in PLINK
gwas qc plink imputation written 6 months ago by AR • 0 • updated 6 months ago by Sam • 3.3k
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443
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Imputation results from TOPMED server
imputation snp topmed written 7 months ago by melania 2282 • 100
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How to filter INFO on a vcf file with bcftools
vcf bcftools imputation info written 8 months ago by borarc3 • 10 • updated 7 months ago by biotechdiya • 30
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