Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: imputation • reset
or   Classic search
<prev • 119 results • page 1 of 4 • next >
3
votes
0
answers
1.4k
views
0
answers
How To Create The .Legend And .Phase Files For Gwas Imputation When Using Mach
gwas imputation plink written 4.7 years ago by mandar.bobade60 • 80 • updated 5 days ago by moushengxu • 300
0
votes
0
answers
77
views
0
answers
How to filter Michigan genotype imputation results
gwas rsq qc imputation written 6 days ago by robjohn70000 • 110
3
votes
0
answers
1.4k
views
0
answers
BEAGLE 4.1 imputation
beagle imputation genotyping written 23 months ago by cholingken • 20 • updated 14 days ago by johnnythejota • 0
0
votes
0
answers
110
views
0
answers
Beagle 4.1: Imputation - Error - ERROR: invalid ALT allele
imputation snp written 20 days ago by Bioinformatics_NewComer • 300 • updated 19 days ago by Biostar ♦♦ 20
1
vote
2
answers
546
views
5 follow
2
answers
problem with chromosomes in michigan imputation server
imputation michigan server written 9 months ago by jfertaj • 70 • updated 21 days ago by mgru • 0
0
votes
2
answers
123
views
2
answers
Extracting imputation (INFO) quality scores for specific SNPs from VCF files
imputation genotype written 29 days ago by e.jabbari • 0
9
votes
2
answers
189
views
5 follow
2
answers
Can you assume variants not in VCF are all monomorphic for the reference allele?
vcf variant calling imputation missing variants written 7 weeks ago by wangdavid758 • 10 • updated 7 weeks ago by Pierre Lindenbaum ♦ 106k
1
vote
1
answer
148
views
1
answer
Updating allele frequency (AF) and minor allele frequency (MAF) INFO fields in .vcf
vcf imputation qc vcftools snp written 7 weeks ago by JSEM • 10
1
vote
2
answers
792
views
2
answers
Dosage data single probability to PLINK format
imputation written 17 months ago by smb2174 • 0 • updated 7 weeks ago by chrchang523 ♦ 3.1k
0
votes
0
answers
139
views
0
answers
Interpreting phased data from Beagle
haplotype imputation genotype phasing beagle written 7 weeks ago by chadapohn.chaosrikul • 0
0
votes
1
answer
282
views
1
answer
(resolved) BEAGLE 4.1 imputation ending short with "at dag.MergeableDag" message
genome imputation snp beagle written 3 months ago by Ryan O • 0 • updated 11 weeks ago by Ram ♦ 14k
0
votes
1
answer
301
views
1
answer
Minimac3 VCF to .gen and .sample format
imputation minimac3 snp .gen written 3 months ago by Caragh • 40 • updated 3 months ago by chrchang523 ♦ 3.1k
1
vote
1
answer
331
views
1
answer
From Impute2 to PLINK: when to merge chromosome files?
impute2 imputation plink gwas written 3 months ago by whit18 • 10 • updated 3 months ago by Wietje • 110
0
votes
1
answer
887
views
1
answer
Impute2 Custom Reference Panel
impute2 imputation reference recombination map written 2.4 years ago by ngsgene • 350 • updated 4 months ago by Kevin Blighe ♦ 17k
6
votes
1
answer
345
views
5 follow
1
answer
Custom Reference panel creation for data imputation from .vcf files
reference panel imputation written 4 months ago by David_emir • 250 • updated 4 months ago by Kevin Blighe ♦ 17k
0
votes
1
answer
294
views
1
answer
imputation and changing genotypes in Beagle and FImpute
beagle 4.0 fimpute imputation genotypes written 4 months ago by Wietje • 110 • updated 4 months ago by Shab86 • 220
1
vote
0
answers
264
views
0
answers
Conditioning association summary statistics using a correlation matrix.
imputation conditional analysis fine-mapping written 4 months ago by Vincent Laufer • 880
0
votes
1
answer
315
views
1
answer
Beagle 4.0 Imputation - Warning: Skipping VCF record with no data
beagle 4.0 imputation vcf-file written 4 months ago by Wietje • 110 • updated 4 months ago by Pierre Lindenbaum ♦ 106k
5
votes
4
answers
3.1k
views
4
answers
Filtering Imputation output: how to filter on a VCF INFO field
imputation minimac3 plink filtering vcftools written 20 months ago by mmagoo6 • 40 • updated 4 months ago by shraddha.pai • 0
0
votes
0
answers
279
views
0
answers
Converting BED files for SHAPEIT and IMPUTE2
alignment imputation phasing written 5 months ago by gty18 • 0
4
votes
0
answers
672
views
0
answers
GWAS - approximate odds ratio and standard error
gwas imputation written 6 months ago by alessandrotestori7 • 280 • updated 6 months ago by Kevin Blighe ♦ 17k
0
votes
0
answers
470
views
0
answers
Tool: Gencove Open and free API. Any DNA data from any type to VCF in 10 to 30 mins.
vcf api imputation tool written 7 months ago by maria.vazquez • 0
1
vote
0
answers
448
views
0
answers
is it .impute2 format equal to .gen format
impute2 imputation qctool written 9 months ago by Peter Chung • 60 • updated 8 months ago by Biostar ♦♦ 20
3
votes
1
answer
450
views
1
answer
how to find strand information for a list of SNPs?
strand imputation microarray snp written 8 months ago by miaowzai • 40 • updated 8 months ago by Emily_Ensembl ♦ 14k
4
votes
4
answers
1.7k
views
6 follow
4
answers
Imputation of chromosome X using the Michigan imputation server
imputation genotypes chrx written 12 months ago by Floris Brenk • 800 • updated 10 months ago by chariko • 30
0
votes
0
answers
308
views
0
answers
Do imputed variants tend to show weaker, stronger, or the same average association compared to genotyped variants
imputation genotyped snp gwas written 10 months ago by Vincent Laufer • 880
0
votes
0
answers
370
views
0
answers
R square value from genotype imputation process
gwas imputation population genetics written 11 months ago by isalinas221 • 10
1
vote
0
answers
487
views
0
answers
Chromosome Y imputation, any good reference panels?
imputation chry genotyping written 11 months ago by Floris Brenk • 800
7
votes
2
answers
3.9k
views
2
answers
Relation Between Hapmap Project And 1000Genomes Project
hapmap genome imputation sequencing written 6.2 years ago by Matthew • 50 • updated 12 months ago by Mitch Lokey • 20
0
votes
2
answers
777
views
2
answers
Mach-admix: fatal error with physical map?
physical map mach-admix imputation fatal error written 2.6 years ago by Laura • 20
<prev • 119 results • page 1 of 4 • next >
Recent Votes
Recent Locations • All »
  • United States, 2 minutes ago
  • Germany, 3 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1038 users visited in the last hour