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Recent Votes
- A: Which multiple sequence alignment algorithm should be used for small dataset?
- C: Which multiple sequence alignment algorithm should be used for small dataset?
- A: Extract every CDS sequences from a VCF file
- C: *** buffer overflow detected ***: blastclust terminated?? Is there another way t
- A: Change sample names in vcf
- C: TSV count file contains the corrected number or reads for each assumed fragment
- A: how to extract sample id with bcftools or vcftools
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Recent Replies
-
C: Error while attempting to create a VennDiagram with bcftools stats by
RamRS ♦ 28k
No, `-Ov` means you're expected uncompressed VCF as output, which you're saving in a `vcf.gz` fil...
-
C: Error while attempting to create a VennDiagram with bcftools stats by
caro-ca • 20
I used this code, but it did not work. bcftools sort samples_all_merged_STROPE.vcf -Ov samp...
-
C: Which multiple sequence alignment algorithm should be used for small dataset? by
genomax ♦ 87k
In that case I suggest that you pay particular attention to residues that are known to be critica...
-
C: Which multiple sequence alignment algorithm should be used for small dataset? by
macbas • 0
Thank you very much. Actually I have already done this. The results differ a bit, and since I wan...
-
C: Error while attempting to create a VennDiagram with bcftools stats by
RamRS ♦ 28k
It tells me enough to diagnose what went wrong. There is no need to upload large files.
-
C: Error while attempting to create a VennDiagram with bcftools stats by
RamRS ♦ 28k
You should not have used the `grep` -> `sort` thing you used - that command sequence is flawed...
-
C: *** buffer overflow detected ***: blastclust terminated?? Is there another way t by
jamie.pike • 50
Works perfectly, thank you
-
C: Error while attempting to create a VennDiagram with bcftools stats by
caro-ca • 20
This file is really short compared to the non-sorted file, is there a way to upload files?
-
C: Error while attempting to create a VennDiagram with bcftools stats by
caro-ca • 20
##ALT= ##ALT= ##ALT= ##ALT= ##ALT= #CHROM POS ID REF ALT ...
-
A: Importing/formatting .wig file with strand information by
k.smolyar • 0
The .wig file was generated using igvtools, exporting "counts" coverage information from a BAM fi...
-
C: volcanoplots with different colors for up/down regulated genes by
Kevin Blighe ♦ 63k
To receive help, you will have to share the code that you are running, and [preferably] a fully r...
-
A: New to NGS by
bioinformatics2020 • 330
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